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Lsi09G010080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G010080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionthioredoxin-like fold domain-containing protein MRL7L, chloroplastic
Genome locationchr09:13762663..13763480
RNA-Seq ExpressionLsi09G010080
SyntenyLsi09G010080
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0009570 - chloroplast stroma (cellular component)
InterPro domainsIPR044701 - Thioredoxin-like fold domain-containing protein MRL7/MRL7L


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579721.1 Poly(ADP-ribose) glycohydrolase 1, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4992.52Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEK+R+ELENAIHIIWNCNLPSPRCVAVDAVVER LVSALQVSAFPEIIFTKAGKILYREKGFV A+ELSKIMAFFYYGAAKPPCL+D+ DYQEAI
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVSVDA
        PSVSVDA
Subjt:  PSVSVDA

KAG7017170.1 Thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.8e-4992.52Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEK+R+ELENAIHIIWNCNLPSPRCVAVDAVVER LVSALQVSAFPEIIFTKAGKILYREKGFV A+ELSKIMAFFYYGAAKPPCL+D+ DYQEAI
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVSVDA
        PSVSVDA
Subjt:  PSVSVDA

XP_022969942.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic isoform X2 [Cucurbita maxima]1.1e-4891.59Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEK+R+ELENAIHIIW+CNLPSPRCVAVDAVVER LVSALQVSAFPEIIFTKAGKILYREKGFV A+ELSKIMAFFYYGAAKPPCL+D+ DYQEAI
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVSVDA
        PSVSVDA
Subjt:  PSVSVDA

XP_023551318.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita pepo subsp. pepo]2.8e-4992.52Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEK+R+ELENAIHIIWNCNLPSPRCVAVDAVVER LVSALQVSAFPEIIFTKAGKILYREKGFV A+ELSKIMAFFYYGAAKPPCL+D+ DYQEAI
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVSVDA
        PSVSVDA
Subjt:  PSVSVDA

XP_038876051.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Benincasa hispida]2.2e-4992.52Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEKVREELENA+HIIWNCNLPSPRCVAVDAVVE  LVSALQVS FPEIIFTKAGKILYREKGFV A+ELSKIMAFFYYGAAKPPCLNDIGDYQE I
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVSVDA
        PSVS+DA
Subjt:  PSVSVDA

TrEMBL top hitse value%identityAlignment
A0A1S3B3H0 uncharacterized protein LOC103485750 isoform X23.4e-4893.27Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEKVR+ELENAIHIIWNCNLPSPRCVAVDAVVE  LVSALQVSAFPEIIFTKAGKILYREKGFV A+ELSKIMAFFYYGAAKPPCLND+GDYQE I
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVS
        PSVS
Subjt:  PSVS

A0A5D3BBT5 Uncharacterized protein3.4e-4893.27Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEKVR+ELENAIHIIWNCNLPSPRCVAVDAVVE  LVSALQVSAFPEIIFTKAGKILYREKGFV A+ELSKIMAFFYYGAAKPPCLND+GDYQE I
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVS
        PSVS
Subjt:  PSVS

A0A6J1EMP2 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic1.2e-4891.59Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEK+R+ELENAIHIIWNCNLPSPRCVAVDAVVE  LVSALQVSAFPEIIFTKAGKILYREKGFV A+ELSKIMAFFYYGAAKPPCL+D+ DYQEAI
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVSVDA
        PSVSVDA
Subjt:  PSVSVDA

A0A6J1HXQ7 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic isoform X25.2e-4991.59Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEK+R+ELENAIHIIW+CNLPSPRCVAVDAVVER LVSALQVSAFPEIIFTKAGKILYREKGFV A+ELSKIMAFFYYGAAKPPCL+D+ DYQEAI
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVSVDA
        PSVSVDA
Subjt:  PSVSVDA

A0A6J1HZ67 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic isoform X15.2e-4991.59Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEK+R+ELENAIHIIW+CNLPSPRCVAVDAVVER LVSALQVSAFPEIIFTKAGKILYREKGFV A+ELSKIMAFFYYGAAKPPCL+D+ DYQEAI
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVSVDA
        PSVSVDA
Subjt:  PSVSVDA

SwissProt top hitse value%identityAlignment
F4JLC1 Thioredoxin-like fold domain-containing protein MRL7, chloroplastic1.3e-1241.94Show/hide
Query:  RPKENEKVREELENAIHIIWNC--NLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLN
        R  +N K  +ELE AI + W+    LP PR V +D  +E  L  AL+    P+I+F +  +ILYREK F  A+EL  ++A FYY A +P C++
Subjt:  RPKENEKVREELENAIHIIWNC--NLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLN

Q0DI48 Thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic2.4e-2756.19Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDI-GDYQEA
        RP++NE  R++L  AI + W  NLPSPRCVAVDA  E  LV AL VS FPE++FT AGKI++R+K    AEE +++MAFFYY AA+PPCL++  G  QE 
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDI-GDYQEA

Query:  IPSVS
        +P +S
Subjt:  IPSVS

Q5QLS7 Thioredoxin-like fold domain-containing protein MRL7 homolog, chloroplastic2.4e-1446.24Show/hide
Query:  RPKENEKVREELENAIHIIWNC--NLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLN
        R  +N K  +ELE A  + WN    LP PR V VD  +ER L  ALQV   P+++F +  KILYREK    A+EL +++A FYY A +P C+N
Subjt:  RPKENEKVREELENAIHIIWNC--NLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLN

Q9SKB6 Thioredoxin-like fold domain-containing protein MRL7L, chloroplastic1.3e-4180Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEK REELE AI +IWNC LPSPRCVAVDAVVE  LVSAL+VS FPEIIFTKAGKILYREKG   A+ELSKIMAFFYYGAAKPPCLN + + QE I
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVSV
        P V V
Subjt:  PSVSV

Arabidopsis top hitse value%identityAlignment
AT2G31840.1 Thioredoxin superfamily protein9.4e-4380Show/hide
Query:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI
        RPKENEK REELE AI +IWNC LPSPRCVAVDAVVE  LVSAL+VS FPEIIFTKAGKILYREKG   A+ELSKIMAFFYYGAAKPPCLN + + QE I
Subjt:  RPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAI

Query:  PSVSV
        P V V
Subjt:  PSVSV

AT4G28590.1 FUNCTIONS IN: molecular_function unknown9.2e-1441.94Show/hide
Query:  RPKENEKVREELENAIHIIWNC--NLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLN
        R  +N K  +ELE AI + W+    LP PR V +D  +E  L  AL+    P+I+F +  +ILYREK F  A+EL  ++A FYY A +P C++
Subjt:  RPKENEKVREELENAIHIIWNC--NLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTATGATGTCTTCACTTAGGCCAAAGGAAAATGAAAAAGTTCGTGAGGAGCTGGAGAATGCTATCCACATAATATGGAATTGCAATCTGCCTTCGCCAAGATG
TGTTGCCGTCGATGCCGTTGTTGAACGCACCTTGGTCTCTGCTCTTCAAGTGTCTGCCTTTCCAGAGATCATCTTCACTAAAGCAGGGAAAATCTTATACCGTGAGAAGG
GATTTGTATGTGCAGAAGAGTTGTCTAAAATAATGGCATTCTTCTACTATGGAGCAGCTAAGCCACCATGTTTAAATGATATTGGGGATTATCAGGAGGCGATCCCATCA
GTTTCTGTTGATGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTATGATGTCTTCACTTAGGCCAAAGGAAAATGAAAAAGTTCGTGAGGAGCTGGAGAATGCTATCCACATAATATGGAATTGCAATCTGCCTTCGCCAAGATG
TGTTGCCGTCGATGCCGTTGTTGAACGCACCTTGGTCTCTGCTCTTCAAGTGTCTGCCTTTCCAGAGATCATCTTCACTAAAGCAGGGAAAATCTTATACCGTGAGAAGG
GATTTGTATGTGCAGAAGAGTTGTCTAAAATAATGGCATTCTTCTACTATGGAGCAGCTAAGCCACCATGTTTAAATGATATTGGGGATTATCAGGAGGCGATCCCATCA
GTTTCTGTTGATGCCTAGTTGTACCATGAAAAGAAAAAAAAAATTGAAATGTAAAATATGGTCTTTTTGGTTTGTTGTAGATGAGGAATTTCAGTGCAATCAGTTTGTTG
GGCCAAATATTTTTGGAAAGGCCAAAGAACATCAGTTATACAACTTTATCAGCTGTTTAAGGGTATTATAGAAATATGAAATATATCATAACTTAAGATGACATAGCAAC
AAGAGCAGGTAGTTGTGATTCTTGTATTATTTTTCAGGTCAATTAGTTTGGGTTCTTAATTAACTCCTCCTGTCACTATGTTAGC
Protein sequenceShow/hide protein sequence
MACMMSSLRPKENEKVREELENAIHIIWNCNLPSPRCVAVDAVVERTLVSALQVSAFPEIIFTKAGKILYREKGFVCAEELSKIMAFFYYGAAKPPCLNDIGDYQEAIPS
VSVDA