CuGenDBv2

Gene ID	Lsi09G010230
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Methionine aminopeptidase
Genome location	chr09:14431403..14431933
RNA-Seq Expression	Lsi09G010230
Synteny	Lsi09G010230
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0070084 - protein initiator methionine removal (biological process) GO:0046872 - metal ion binding (molecular function) GO:0070006 - metalloaminopeptidase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7034828.1 Methionine aminopeptidase 1B, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-23

79.49

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Query:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRL
        MAI ASL+RVSS  LSSV HGDDFSPSSKS+SFMGVPLNFLPS+RSGKQKQFH+NLV+VSKR SGLEEA+R  R  +L
Subjt:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRL

XP_004147182.1 methionine aminopeptidase 1B, chloroplastic isoform X1 [Cucumis sativus]

1.9e-23

86.67

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Query:  MAIGASLLRVSSLN-LSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRR
        MA GASL+RVSSL  LSSVSHGDDFS SSKS+SFMG PLNFLPSYRS KQK FHENLVIVSK+ISGLEEAMRIRR
Subjt:  MAIGASLLRVSSLN-LSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRR

XP_022922375.1 methionine aminopeptidase 1B, chloroplastic isoform X1 [Cucurbita moschata]

3.0e-24

80.77

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Query:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRL
        MAI ASL+RVSS  LSSVSHGDDFSPSSKS+SFMGVPLNFLPS+RSGKQKQFH+NLV+VSKR SGLEEA+R  R  +L
Subjt:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRL

XP_022974354.1 methionine aminopeptidase 1B, chloroplastic isoform X1 [Cucurbita maxima]

6.7e-24

80.77

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Query:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRL
        MAI ASL+RVSSL LSSVSHG DFSPSSKS+SFMGVPLNFLPS+RSGKQKQFH+NLV+VSKR SGLEEA+R  R  +L
Subjt:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRL

XP_038874534.1 methionine aminopeptidase 1B, chloroplastic [Benincasa hispida]

2.2e-27

91.89

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Query:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRR
        MAIGASL+RVSSL LSSVSHGDDFSPSSK ASFMG PLNFLPSYRSGKQK+FHENLV+VSKRISGLEEAMRIRR
Subjt:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KMK3 Uncharacterized protein

3.0e-30

88.24

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Query:  MAIGASLLRVSSLN-LSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRLTGFKAL
        MA GASL+RVSSL  LSSVSHGDDFS SSKS+SFMG PLNFLPSYRS KQK FHENLVIVSK+ISGLEEAMRIRRYCRLTGFKAL
Subjt:  MAIGASLLRVSSLN-LSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRLTGFKAL

A0A0A0LI62 Methionine aminopeptidase

9.4e-24

86.67

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Query:  MAIGASLLRVSSLN-LSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRR
        MA GASL+RVSSL  LSSVSHGDDFS SSKS+SFMG PLNFLPSYRS KQK FHENLVIVSK+ISGLEEAMRIRR
Subjt:  MAIGASLLRVSSLN-LSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRR

A0A5A7UAX7 Methionine aminopeptidase

1.6e-23

85.33

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Query:  MAIGASLLRVSSLN-LSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRR
        MA GASL+RVSSL  LSSVSHGDDFS SSKS+SF+G PLNFLPSYRSGK+  FHENLVIVSKRISGLEEAMRIRR
Subjt:  MAIGASLLRVSSLN-LSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRR

A0A6J1E8K3 Methionine aminopeptidase

1.5e-24

80.77

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Query:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRL
        MAI ASL+RVSS  LSSVSHGDDFSPSSKS+SFMGVPLNFLPS+RSGKQKQFH+NLV+VSKR SGLEEA+R  R  +L
Subjt:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRL

A0A6J1IHD3 Methionine aminopeptidase

3.2e-24

80.77

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Query:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRL
        MAI ASL+RVSSL LSSVSHG DFSPSSKS+SFMGVPLNFLPS+RSGKQKQFH+NLV+VSKR SGLEEA+R  R  +L
Subjt:  MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G13270.1 methionine aminopeptidase 1B

8.2e-04

40.58

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Query:  SSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQ-----KQFHENLVIVSKRISGLEEAMRIRR
        SSL L S  HG+  +P   S  F+G P+       SGK+     +QFH    + +K++SGLEEA+RIR+
Subjt:  SSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQ-----KQFHENLVIVSKRISGLEEAMRIRR

AT1G13270.2 methionine aminopeptidase 1B

8.2e-04

40.58

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Query:  SSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQ-----KQFHENLVIVSKRISGLEEAMRIRR
        SSL L S  HG+  +P   S  F+G P+       SGK+     +QFH    + +K++SGLEEA+RIR+
Subjt:  SSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQ-----KQFHENLVIVSKRISGLEEAMRIRR

Sequences

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CDS sequence

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ATGGCAATTGGCGCTTCGCTCCTTCGAGTTTCATCATTGAACCTCTCTTCAGTTTCACATGGTGATGATTTCTCACCTTCCTCAAAGTCGGCGTCCTTCATGGGCGTGCC
ACTTAATTTTCTCCCCTCTTATCGCTCTGGGAAACAAAAGCAGTTTCATGAGAATCTTGTCATTGTATCCAAGAGAATTTCGGGTCTGGAGGAAGCCATGAGAATTAGGA
GGTACTGCAGACTCACGGGCTTTAAGGCTCTTTAA

mRNA sequence

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TGCTATCGTTCGTTAATTCAAAGTTTTTGCAGACTGCAGAGAATGGCAATTGGCGCTTCGCTCCTTCGAGTTTCATCATTGAACCTCTCTTCAGTTTCACATGGTGATGA
TTTCTCACCTTCCTCAAAGTCGGCGTCCTTCATGGGCGTGCCACTTAATTTTCTCCCCTCTTATCGCTCTGGGAAACAAAAGCAGTTTCATGAGAATCTTGTCATTGTAT
CCAAGAGAATTTCGGGTCTGGAGGAAGCCATGAGAATTAGGAGGTACTGCAGACTCACGGGCTTTAAGGCTCTTTAA

Protein sequence

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MAIGASLLRVSSLNLSSVSHGDDFSPSSKSASFMGVPLNFLPSYRSGKQKQFHENLVIVSKRISGLEEAMRIRRYCRLTGFKAL

Lsi09G010230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome