; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G010420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G010420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr09:15553644..15604698
RNA-Seq ExpressionLsi09G010420
SyntenyLsi09G010420
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1840598.1 unnamed protein product [Ananas comosus var. bracteatus]2.1e-0625.49Show/hide
Query:  GIPTRRKSTAVGTMRISGTIGRTCNLCPLNYDDWRKVPNIYKQEVWQIIMSKFTVQEKHKRNG---------------------VCHHYLESGVV-----
        G P +++   +G     GT+ R  N C L+Y+ W+KVPN  K E+ Q+  +KF +   +  N                      +   Y E  +V     
Subjt:  GIPTRRKSTAVGTMRISGTIGRTCNLCPLNYDDWRKVPNIYKQEVWQIIMSKFTVQEKHKRNG---------------------VCHHYLESGVV-----

Query:  ---INVIYEENTL-EAMPFENEVFDQVMGKEHSGCVRGMGLGLTPIQVFKTKYHQVVEGEITSWTSMENHETVEERCRLTK--LESEVADMQSDMKKVLS
           +N      +L  A+  E + F  + GK+  G VRG G+G+ P QVF     Q   G +    + E  + ++ + +L +   ES++  MQ D +  L 
Subjt:  ---INVIYEENTL-EAMPFENEVFDQVMGKEHSGCVRGMGLGLTPIQVFKTKYHQVVEGEITSWTSMENHETVEERCRLTK--LESEVADMQSDMKKVLS

Query:  LLRQ
        ++ Q
Subjt:  LLRQ

CAD1841008.1 unnamed protein product [Ananas comosus var. bracteatus]6.4e-0827.6Show/hide
Query:  GTIGRTCNLCPLNYDDWRKVPNIYKQEVWQIIMSKFTV-------------------------QEKHKRNGVCHHYLES------GVVINVIYEENTLEA
        GT+ R  NLCP++Y  W+K+PN +K  +  +  SKF+V                         + K+K N      + S       V    +  E+    
Subjt:  GTIGRTCNLCPLNYDDWRKVPNIYKQEVWQIIMSKFTV-------------------------QEKHKRNGVCHHYLES------GVVINVIYEENTLEA

Query:  MPFENEVFDQVMGKEHSGCVRGMGLGLTPIQVFKTKYHQVVEGEITSWTSMENHETVEERCRLTKLESEVADMQSDMKKVLSLLRQMNSTQV
           ENEVF +++GKE  G VRG GLG +P QVF         G    +  M+N E         +L+S++  MQ++ +  L+ ++Q   T++
Subjt:  MPFENEVFDQVMGKEHSGCVRGMGLGLTPIQVFKTKYHQVVEGEITSWTSMENHETVEERCRLTKLESEVADMQSDMKKVLSLLRQMNSTQV

KAA0041004.1 hypothetical protein E6C27_scaffold125G002220 [Cucumis melo var. makuwa]1.2e-0935.07Show/hide
Query:  SQPNTDDFIP----LSHEPDVETDNEKKGAPWKLRSPITNQPVGKK-KKRVQPYDPIGKIPMRIEKQFSSYIGDPKRVNETRATVQSIRKFPWFIQLMTP
        S+ + DD IP    L      E    K+    KL+S +  Q  GKK +K+V+PY+P  KI  + +KQF +Y+ DP+R  E R TV+ +R   WF  L+TP
Subjt:  SQPNTDDFIP----LSHEPDVETDNEKKGAPWKLRSPITNQPVGKK-KKRVQPYDPIGKIPMRIEKQFSSYIGDPKRVNETRATVQSIRKFPWFIQLMTP

Query:  DTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFI
         TFT+D+  D        + L N + ++M   ++
Subjt:  DTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFI

KAA0047676.1 Ulp1-like peptidase [Cucumis melo var. makuwa]2.1e-0657.41Show/hide
Query:  IQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFLRRSP
        + L+ P+TF + +TMD + LFTQKKL  N D SH+KK FITT+  ++NFLRRSP
Subjt:  IQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFLRRSP

KAA0051324.1 hypothetical protein E6C27_scaffold55G00410 [Cucumis melo var. makuwa]1.5e-0930.57Show/hide
Query:  NAEEDDKVGVVPIYISSGDKDTTGPSGSTLKESKDEPLEFEVVEEVIRSSQPNTDDFIPLSHEPDVETDNEKKGAPWKLRSPITNQPVGKKKKRVQPYDP
        N   DD+   +P  I    + T   + +++ E   + +  +V  E    S P     + L +EP +E D E       ++ P     V  KKK  +  D 
Subjt:  NAEEDDKVGVVPIYISSGDKDTTGPSGSTLKESKDEPLEFEVVEEVIRSSQPNTDDFIPLSHEPDVETDNEKKGAPWKLRSPITNQPVGKKKKRVQPYDP

Query:  IGK--IPMRIEKQFSSYIGDPKRVNETRATVQSIRKFPWFIQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFLRRS
          K  IPM+ +KQF +Y+ DP++  E + TV+S R   WF+ L++P TF D+D     C             SH+KK+F T +R + NFLR S
Subjt:  IGK--IPMRIEKQFSSYIGDPKRVNETRATVQSIRKFPWFIQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFLRRS

TrEMBL top hitse value%identityAlignment
A0A5A7U0C4 Ulp1-like peptidase1.0e-0657.41Show/hide
Query:  IQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFLRRSP
        + L+ P+TF + +TMD + LFTQKKL  N D SH+KK FITT+  ++NFLRRSP
Subjt:  IQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFLRRSP

A0A5A7U7N5 Uncharacterized protein7.4e-1030.57Show/hide
Query:  NAEEDDKVGVVPIYISSGDKDTTGPSGSTLKESKDEPLEFEVVEEVIRSSQPNTDDFIPLSHEPDVETDNEKKGAPWKLRSPITNQPVGKKKKRVQPYDP
        N   DD+   +P  I    + T   + +++ E   + +  +V  E    S P     + L +EP +E D E       ++ P     V  KKK  +  D 
Subjt:  NAEEDDKVGVVPIYISSGDKDTTGPSGSTLKESKDEPLEFEVVEEVIRSSQPNTDDFIPLSHEPDVETDNEKKGAPWKLRSPITNQPVGKKKKRVQPYDP

Query:  IGK--IPMRIEKQFSSYIGDPKRVNETRATVQSIRKFPWFIQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFLRRS
          K  IPM+ +KQF +Y+ DP++  E + TV+S R   WF+ L++P TF D+D     C             SH+KK+F T +R + NFLR S
Subjt:  IGK--IPMRIEKQFSSYIGDPKRVNETRATVQSIRKFPWFIQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFLRRS

A0A5D3BBM3 Uncharacterized protein2.2e-0631.33Show/hide
Query:  IRSSQPNTDDFIPLSHEPDVETDNEKKGAPWKLRSPITNQPVGKKKKRVQPYDPIGKIPMRIEKQFSS---YIGD--------PKRVNETR---------
        IR   PN+   +  S + ++ T          LR  I +  V  + K V P  P   +  ++ K       Y+G+         KR+ E R         
Subjt:  IRSSQPNTDDFIPLSHEPDVETDNEKKGAPWKLRSPITNQPVGKKKKRVQPYDPIGKIPMRIEKQFSS---YIGD--------PKRVNETR---------

Query:  ATVQSIRKFPWFIQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFLRRSP
         T++S     WF+ L+TP TFTDDD    +C    KKL  N DP HMKK F   +  ++NFLRR+P
Subjt:  ATVQSIRKFPWFIQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFLRRSP

A0A5D3DA67 Uncharacterized protein5.7e-1035.07Show/hide
Query:  SQPNTDDFIP----LSHEPDVETDNEKKGAPWKLRSPITNQPVGKK-KKRVQPYDPIGKIPMRIEKQFSSYIGDPKRVNETRATVQSIRKFPWFIQLMTP
        S+ + DD IP    L      E    K+    KL+S +  Q  GKK +K+V+PY+P  KI  + +KQF +Y+ DP+R  E R TV+ +R   WF  L+TP
Subjt:  SQPNTDDFIP----LSHEPDVETDNEKKGAPWKLRSPITNQPVGKK-KKRVQPYDPIGKIPMRIEKQFSSYIGDPKRVNETRATVQSIRKFPWFIQLMTP

Query:  DTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFI
         TFT+D+  D        + L N + ++M   ++
Subjt:  DTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFI

A0A6V7QDD2 Uncharacterized protein3.1e-0827.6Show/hide
Query:  GTIGRTCNLCPLNYDDWRKVPNIYKQEVWQIIMSKFTV-------------------------QEKHKRNGVCHHYLES------GVVINVIYEENTLEA
        GT+ R  NLCP++Y  W+K+PN +K  +  +  SKF+V                         + K+K N      + S       V    +  E+    
Subjt:  GTIGRTCNLCPLNYDDWRKVPNIYKQEVWQIIMSKFTV-------------------------QEKHKRNGVCHHYLES------GVVINVIYEENTLEA

Query:  MPFENEVFDQVMGKEHSGCVRGMGLGLTPIQVFKTKYHQVVEGEITSWTSMENHETVEERCRLTKLESEVADMQSDMKKVLSLLRQMNSTQV
           ENEVF +++GKE  G VRG GLG +P QVF         G    +  M+N E         +L+S++  MQ++ +  L+ ++Q   T++
Subjt:  MPFENEVFDQVMGKEHSGCVRGMGLGLTPIQVFKTKYHQVVEGEITSWTSMENHETVEERCRLTKLESEVADMQSDMKKVLSLLRQMNSTQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGGGAGTGGGGTCTGAGGTGAGAGTGACTTTGAAGGAGACCTTTCCGCCATCCGCACCTGCCATTTTCGAGCTCTGTGATGTTGTGAAGAACGCGGAAGAAGA
TGACAAAGTGGGTGTTGTCCCAATCTATATATCATCTGGTGACAAAGATACAACTGGTCCATCAGGTAGTACACTGAAAGAGTCGAAGGACGAGCCGTTAGAGTTTGAAG
TTGTAGAGGAGGTCATTCGGTCATCCCAACCGAATACGGATGATTTCATTCCGTTGTCACATGAACCGGATGTGGAAACGGACAACGAGAAAAAAGGGGCGCCATGGAAG
CTCCGTAGTCCAATTACGAATCAACCAGTCGGGAAGAAGAAGAAAAGGGTGCAACCGTATGATCCAATTGGTAAGATACCGATGCGGATTGAGAAGCAGTTCTCTTCGTA
TATTGGAGACCCTAAACGGGTCAATGAGACGCGGGCAACTGTTCAGAGCATACGGAAGTTTCCGTGGTTCATTCAATTGATGACACCAGACACATTCACTGACGACGACA
CGATGGACACCTTATGTTTGTTCACCCAAAAGAAGTTATTGGATAATACTGATCCATCCCATATGAAGAAGAAGTTTATCACGACTAATAGACTCGTATCGAATTTCCTT
AGACGTAGCCCAGAGTCTAGTCCTTTAGAAGGAAACATTGGCAATTTGAAGGAAGCTAATGTTAATATAAAAGCTAATTTAACAGTTAATGGTGATATTGATGTAGTAGA
CCTAGATTTCGATCAAACGACTCTGCTATTAAGACCACAATTGATGACCACCGATGACAGCTACCAAGCGATGGCTGACGACGACTATCAAGTGGCGACTAATGACGACT
ATGGGCAGTCGGAGGAAGAGGATTACAGGAAGCCAAGCTATGAGTGGTGTGATGAGGATGAGGAGCGTCGATATGGGGTGGGGATTCCGACGAGGAGGAAAAGCACGGCC
GTCGGAACTATGAGGATAAGTGGGACTATTGGAAGAACTTGCAATCTTTGTCCTCTAAACTATGATGATTGGAGAAAGGTACCCAATATATACAAGCAAGAAGTTTGGCA
AATCATTATGTCAAAATTCACGGTTCAAGAAAAACATAAAAGAAATGGTGTTTGTCATCATTATCTAGAAAGTGGGGTGGTTATAAATGTAATCTACGAGGAAAATACCT
TAGAAGCTATGCCTTTTGAGAATGAAGTGTTTGATCAAGTCATGGGCAAAGAACATTCTGGATGTGTTCGTGGAATGGGATTAGGACTTACACCCATTCAAGTTTTTAAA
ACTAAATATCATCAAGTTGTAGAGGGTGAGATCACTTCTTGGACAAGTATGGAAAACCATGAAACTGTAGAAGAAAGATGTAGACTAACAAAACTAGAGTCTGAAGTGGC
GGACATGCAGTCAGATATGAAGAAAGTGCTTTCATTATTGAGACAAATGAATTCTACACAAGTTGGTAGCAGTAGCGGAGCATCTCTGGATGACAATTCAAGAAAGGCTA
TAACAAATGTTGTGATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTGGGAGTGGGGTCTGAGGTGAGAGTGACTTTGAAGGAGACCTTTCCGCCATCCGCACCTGCCATTTTCGAGCTCTGTGATGTTGTGAAGAACGCGGAAGAAGA
TGACAAAGTGGGTGTTGTCCCAATCTATATATCATCTGGTGACAAAGATACAACTGGTCCATCAGGTAGTACACTGAAAGAGTCGAAGGACGAGCCGTTAGAGTTTGAAG
TTGTAGAGGAGGTCATTCGGTCATCCCAACCGAATACGGATGATTTCATTCCGTTGTCACATGAACCGGATGTGGAAACGGACAACGAGAAAAAAGGGGCGCCATGGAAG
CTCCGTAGTCCAATTACGAATCAACCAGTCGGGAAGAAGAAGAAAAGGGTGCAACCGTATGATCCAATTGGTAAGATACCGATGCGGATTGAGAAGCAGTTCTCTTCGTA
TATTGGAGACCCTAAACGGGTCAATGAGACGCGGGCAACTGTTCAGAGCATACGGAAGTTTCCGTGGTTCATTCAATTGATGACACCAGACACATTCACTGACGACGACA
CGATGGACACCTTATGTTTGTTCACCCAAAAGAAGTTATTGGATAATACTGATCCATCCCATATGAAGAAGAAGTTTATCACGACTAATAGACTCGTATCGAATTTCCTT
AGACGTAGCCCAGAGTCTAGTCCTTTAGAAGGAAACATTGGCAATTTGAAGGAAGCTAATGTTAATATAAAAGCTAATTTAACAGTTAATGGTGATATTGATGTAGTAGA
CCTAGATTTCGATCAAACGACTCTGCTATTAAGACCACAATTGATGACCACCGATGACAGCTACCAAGCGATGGCTGACGACGACTATCAAGTGGCGACTAATGACGACT
ATGGGCAGTCGGAGGAAGAGGATTACAGGAAGCCAAGCTATGAGTGGTGTGATGAGGATGAGGAGCGTCGATATGGGGTGGGGATTCCGACGAGGAGGAAAAGCACGGCC
GTCGGAACTATGAGGATAAGTGGGACTATTGGAAGAACTTGCAATCTTTGTCCTCTAAACTATGATGATTGGAGAAAGGTACCCAATATATACAAGCAAGAAGTTTGGCA
AATCATTATGTCAAAATTCACGGTTCAAGAAAAACATAAAAGAAATGGTGTTTGTCATCATTATCTAGAAAGTGGGGTGGTTATAAATGTAATCTACGAGGAAAATACCT
TAGAAGCTATGCCTTTTGAGAATGAAGTGTTTGATCAAGTCATGGGCAAAGAACATTCTGGATGTGTTCGTGGAATGGGATTAGGACTTACACCCATTCAAGTTTTTAAA
ACTAAATATCATCAAGTTGTAGAGGGTGAGATCACTTCTTGGACAAGTATGGAAAACCATGAAACTGTAGAAGAAAGATGTAGACTAACAAAACTAGAGTCTGAAGTGGC
GGACATGCAGTCAGATATGAAGAAAGTGCTTTCATTATTGAGACAAATGAATTCTACACAAGTTGGTAGCAGTAGCGGAGCATCTCTGGATGACAATTCAAGAAAGGCTA
TAACAAATGTTGTGATATAA
Protein sequenceShow/hide protein sequence
MALGVGSEVRVTLKETFPPSAPAIFELCDVVKNAEEDDKVGVVPIYISSGDKDTTGPSGSTLKESKDEPLEFEVVEEVIRSSQPNTDDFIPLSHEPDVETDNEKKGAPWK
LRSPITNQPVGKKKKRVQPYDPIGKIPMRIEKQFSSYIGDPKRVNETRATVQSIRKFPWFIQLMTPDTFTDDDTMDTLCLFTQKKLLDNTDPSHMKKKFITTNRLVSNFL
RRSPESSPLEGNIGNLKEANVNIKANLTVNGDIDVVDLDFDQTTLLLRPQLMTTDDSYQAMADDDYQVATNDDYGQSEEEDYRKPSYEWCDEDEERRYGVGIPTRRKSTA
VGTMRISGTIGRTCNLCPLNYDDWRKVPNIYKQEVWQIIMSKFTVQEKHKRNGVCHHYLESGVVINVIYEENTLEAMPFENEVFDQVMGKEHSGCVRGMGLGLTPIQVFK
TKYHQVVEGEITSWTSMENHETVEERCRLTKLESEVADMQSDMKKVLSLLRQMNSTQVGSSSGASLDDNSRKAITNVVI