; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G010440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G010440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUbiquitin-fold modifier 1
Genome locationchr09:15680040..15682864
RNA-Seq ExpressionLsi09G010440
SyntenyLsi09G010440
Gene Ontology termsGO:1990592 - protein K69-linked ufmylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR005375 - Ubiquitin-fold modifier 1
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140331.1 ubiquitin-fold modifier 1 [Cucumis sativus]3.7e-3881.08Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA                     GNVFLKHGSEL
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL

Query:  RLIPRDRVGAA
        RLIPRDRVGAA
Subjt:  RLIPRDRVGAA

XP_022141697.1 ubiquitin-fold modifier 1 [Momordica charantia]8.2e-3880.18Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA                     GNVFLKHGSEL
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL

Query:  RLIPRDRVGAA
        RLIPRDRVGA+
Subjt:  RLIPRDRVGAA

XP_022990075.1 ubiquitin-fold modifier 1-like [Cucurbita maxima]1.1e-3780.91Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA                     GNVFLKHGSEL
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL

Query:  RLIPRDRVGA
        RLIPRDRVGA
Subjt:  RLIPRDRVGA

XP_023547732.1 ubiquitin-fold modifier 1-like [Cucurbita pepo subsp. pepo]3.7e-3881.08Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA                     GNVFLKHGSEL
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL

Query:  RLIPRDRVGAA
        RLIPRDRVGAA
Subjt:  RLIPRDRVGAA

XP_024952700.1 ubiquitin-fold modifier 1 isoform X1 [Citrus sinensis]1.4e-3781.48Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLI
        A GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA +   G  + +  L     C GNVFLKHGSELRLI
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLI

Query:  PRDRVGAA
        PRDRVGA+
Subjt:  PRDRVGAA

TrEMBL top hitse value%identityAlignment
A0A0A0KTD7 Ubiquitin-fold modifier 11.8e-3881.08Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA                     GNVFLKHGSEL
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL

Query:  RLIPRDRVGAA
        RLIPRDRVGAA
Subjt:  RLIPRDRVGAA

A0A1S3CPQ1 Ubiquitin-fold modifier 11.8e-3881.08Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA                     GNVFLKHGSEL
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL

Query:  RLIPRDRVGAA
        RLIPRDRVGAA
Subjt:  RLIPRDRVGAA

A0A6J1CKK3 Ubiquitin-fold modifier 14.0e-3880.18Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA                     GNVFLKHGSEL
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL

Query:  RLIPRDRVGAA
        RLIPRDRVGA+
Subjt:  RLIPRDRVGAA

A0A6J1FF53 Ubiquitin-fold modifier 11.8e-3881.08Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA                     GNVFLKHGSEL
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL

Query:  RLIPRDRVGAA
        RLIPRDRVGAA
Subjt:  RLIPRDRVGAA

A0A6J1JXE3 Ubiquitin-fold modifier 11.8e-3881.08Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA                     GNVFLKHGSEL
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSEL

Query:  RLIPRDRVGAA
        RLIPRDRVGAA
Subjt:  RLIPRDRVGAA

SwissProt top hitse value%identityAlignment
Q176V0 Ubiquitin-fold modifier 11.1e-3270.87Show/hide
Query:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLIPRDR
        KV+FK+TLTSDPKLPFKV SVPEA PFTAVLKFAAEEFKVPP TSAIIT+DG+GINPQQ+A                     GNVFLKHGSELRLIPRDR
Subjt:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLIPRDR

Query:  VGA
        VG+
Subjt:  VGA

Q5PU89 Ubiquitin-fold modifier 11.7e-3371.96Show/hide
Query:  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLIP
        G  KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ+A                     GNVFLKHGSELRLIP
Subjt:  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLIP

Query:  RDRVGAA
        RDRVG +
Subjt:  RDRVGAA

Q94DM8 Ubiquitin-fold modifier 15.0e-3878.5Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLI
        AGGGKVSFK+ LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSA                     GNVFLKHGSELRLI
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLI

Query:  PRDRVGA
        PRDRVGA
Subjt:  PRDRVGA

Q94EY2 Ubiquitin-fold modifier 14.9e-3374.51Show/hide
Query:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLIPRDR
        KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ A                     GNVFLKHGSELRLIPRDR
Subjt:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLIPRDR

Query:  VG
        VG
Subjt:  VG

Q9CA23 Ubiquitin-fold modifier 12.5e-3777.57Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLI
        A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQQSA                     GNVFLKHGSELRLI
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLI

Query:  PRDRVGA
        PRDRVGA
Subjt:  PRDRVGA

Arabidopsis top hitse value%identityAlignment
AT1G77710.1 CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).1.8e-3877.57Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLI
        A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQQSA                     GNVFLKHGSELRLI
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLI

Query:  PRDRVGA
        PRDRVGA
Subjt:  PRDRVGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTGCTGGTGGCGGAAAGGTCTCCTTCAAAGTCACTCTCACCTCAGACCCCAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCAGT
CCTCAAATTTGCCGCTGAAGAATTCAAGGTGCCCCCGCAAACCAGCGCCATCATCACCAATGATGGCGTTGGAATAAATCCTCAACAAAGTGCTGGTAAGCTGATTGATG
GTCTTATTCTTAAGCTCTACAATTTATTGCGTCCTTGCTTCTGTTCTGGCAATGTCTTCCTCAAGCATGGCTCTGAACTACGCCTGATTCCTCGCGATAGGGTTGGAGCT
GCCTGA
mRNA sequenceShow/hide mRNA sequence
TATTAATGAAAATATCAAAGCAAGAAGACTTTTTCTCTTTTTTTTCAGTTGATCTTATGTTTGGCTAAATTCATACAAGAATCTCCTCCAAAATCAACGAGGTTCAACCT
TCACCACATCACAGAGCTCGAAAATGGCGGGTGCTGGTGGCGGAAAGGTCTCCTTCAAAGTCACTCTCACCTCAGACCCCAAGCTCCCTTTCAAAGTGTTTAGTGTTCCA
GAGGCCGCGCCCTTCACCGCAGTCCTCAAATTTGCCGCTGAAGAATTCAAGGTGCCCCCGCAAACCAGCGCCATCATCACCAATGATGGCGTTGGAATAAATCCTCAACA
AAGTGCTGGTAAGCTGATTGATGGTCTTATTCTTAAGCTCTACAATTTATTGCGTCCTTGCTTCTGTTCTGGCAATGTCTTCCTCAAGCATGGCTCTGAACTACGCCTGA
TTCCTCGCGATAGGGTTGGAGCTGCCTGATCTCTCTGTGAATGTAAACTACAATCCCTTTGTCTACTCGCCTTAGTTAACTGGCTTAATTTGCAATTGTCAAGCTGGGAG
AATTTCATACTTGTTCATCACATTATTGTAACTGATTGATGTCCTGCTTAATTAAATAAATGAGCCTCCTTATTTCGGGGCACTCTTTTTAATCATTTTAAACTTGGACA
AAGTTACATAGTTGGAGACCAAATTTTAGTTTTAAAGCCTAGTCAGGATATCATTTTTTTTTTCTTTCTCCGCTAGATATGTGGAAATTGTTCCTTATTTTTCTAAAAAT
TTGGCCAGGTAAATTTGATTATGAGGAATTTTGC
Protein sequenceShow/hide protein sequence
MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGKLIDGLILKLYNLLRPCFCSGNVFLKHGSELRLIPRDRVGA
A