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Lsi09G010740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G010740
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal protein L35A
Genome locationchr09:16719571..16743897
RNA-Seq ExpressionLsi09G010740
SyntenyLsi09G010740
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463199.1 PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo]4.3e-2480.56Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LYT+GTILGYKRSK NQYPNTS LQI+GV SKDEVSWYQGKRL+YIYKAKVKK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

XP_021981583.1 60S ribosomal protein L35a-1 [Helianthus annuus]2.8e-2376.39Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LYT+GTILGYKRSK NQYPNTS +QI+GV +K+EVSWYQGKR++YIYKAKVKK  SHYRCIWGK   P+ NT
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

XP_022957040.1 60S ribosomal protein L35a-1 [Cucurbita moschata]4.3e-2480.56Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LYT+GTILGYKRSK NQYPNTS LQI+GV SKDEVSWYQGKRL+YIYKAKVKK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

XP_023734154.1 60S ribosomal protein L35a-1 [Lactuca sativa]1.7e-2376.39Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LYT+GTILGYKRSK NQYPNTS +QI+GV +KDEVSWYQGKR++Y+YKAKVKK  SHYRCIWGK   P+ NT
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

XP_038891868.1 60S ribosomal protein L35a-1 [Benincasa hispida]4.3e-2480.56Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LYT+GTILGYKRSK NQYPNTS LQI+GV SKDEVSWYQGKRL+YIYKAKVKK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

TrEMBL top hitse value%identityAlignment
A0A0A0KM11 Uncharacterized protein2.1e-2480.56Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LYT+GTILGYKRSK NQYPNTS LQI+GV SKDEVSWYQGKRL+YIYKAKVKK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

A0A1S3CIN8 60S ribosomal protein L35a-12.1e-2480.56Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LYT+GTILGYKRSK NQYPNTS LQI+GV SKDEVSWYQGKRL+YIYKAKVKK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

A0A5A7T1I6 Ribosomal protein L35A2.1e-2480.56Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LYT+GTILGYKRSK NQYPNTS LQI+GV SKDEVSWYQGKRL+YIYKAKVKK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

A0A6J1GZF1 60S ribosomal protein L35a-12.1e-2480.56Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LYT+GTILGYKRSK NQYPNTS LQI+GV SKDEVSWYQGKRL+YIYKAKVKK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

A0A6J1IM24 60S ribosomal protein L35a-1-like2.1e-2480.56Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LYT+GTILGYKRSK NQYPNTS LQI+GV SKDEVSWYQGKRL+YIYKAKVKK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

SwissProt top hitse value%identityAlignment
P51422 60S ribosomal protein L35a-42.2e-2368.06Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LY +GT+LGYKRSK NQYPNTS +QI+GV +++EV+WY+GKRL+YIYKAK KK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

Q55BN7 60S ribosomal protein L35a3.1e-0939.71Show/hide
Query:  MSILYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYK-AKVKKKKSHYRCIWGK
        M  +Y+KG +LGY+RS+  QYPN S ++I+GV+S+++ ++Y GK++  + K +K  K  + ++  WGK
Subjt:  MSILYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYK-AKVKKKKSHYRCIWGK

Q9C912 60S ribosomal protein L35a-32.9e-2368.06Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LY +GTILGYKRSK NQYPNTS +QI+GV +++EV+WY+GKR++YIYKAK KK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

Q9FZH0 60S ribosomal protein L35a-21.7e-2368.06Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LY +GT+LGYKRSK NQYPNTS +QI+GV +++EV+WY+GKRL+YIYKAK KK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

Q9LMK0 60S ribosomal protein L35a-12.9e-2368.06Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LY +GTILGYKRSK NQYPNTS +Q++GV + +EVSWY+GKR++YIYKAK KK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein2.1e-2468.06Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LY +GTILGYKRSK NQYPNTS +Q++GV + +EVSWY+GKR++YIYKAK KK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

AT1G41880.1 Ribosomal protein L35Ae family protein1.2e-2468.06Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LY +GT+LGYKRSK NQYPNTS +QI+GV +++EV+WY+GKRL+YIYKAK KK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

AT1G74270.1 Ribosomal protein L35Ae family protein2.1e-2468.06Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LY +GTILGYKRSK NQYPNTS +QI+GV +++EV+WY+GKR++YIYKAK KK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT

AT3G55750.1 Ribosomal protein L35Ae family protein1.6e-2468.06Show/hide
Query:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT
        LY +GT+LGYKRSK NQYPNTS +QI+GV +++EV+WY+GKRL+YIYKAK KK  SHYRCIWGK   P+ N+
Subjt:  LYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGK-ELPYSNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATACTCTACACCAAGGGAACAATTCTTGGCTACAAGAGGTCGAAGTTGAACCAGTACCCAAACACTTCTTTCCTCCAGATCAAGGGTGTTATTTCCAAGGATGA
GGTTTCCTGGTACCAAGGGAAGCGATTGTCATATATCTACAAGGCTAAAGTGAAGAAGAAAAAATCCCATTATCGTTGCATTTGGGGCAAGGAATTACCATATTCAAACA
CCATCCAGCGAGGATTGTATTCAGTGGGTGAGATTGCTTTTGCAAATAGTTTCTATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATACTCTACACCAAGGGAACAATTCTTGGCTACAAGAGGTCGAAGTTGAACCAGTACCCAAACACTTCTTTCCTCCAGATCAAGGGTGTTATTTCCAAGGATGA
GGTTTCCTGGTACCAAGGGAAGCGATTGTCATATATCTACAAGGCTAAAGTGAAGAAGAAAAAATCCCATTATCGTTGCATTTGGGGCAAGGAATTACCATATTCAAACA
CCATCCAGCGAGGATTGTATTCAGTGGGTGAGATTGCTTTTGCAAATAGTTTCTATTATTAATTTGTAACCGCAAGGTGAGATTGCTTTCAAATGTTTAAAGTAGTGCAA
ATTATAATGGATTTCTTCCTTTATTTATAATTAATTTATTCGTTGAATTATTGTCAAGCATGTCTGAGGATGAGTGGTTTAACTAAGTTATCTTTGGAACATTTGGCCCA
TACTATTCAAAATGGCATCCTTTACTATTCAAGTTTTGGTGCAACTTTGTTGTGCATAATTGCAAAGACCTCTCCGGCAGAAAATTTTATTTATGCTCTTTGTGATATCC
ACATCATCTACATGTAAATTATGTTTTTATTTGAAATATAAGGCAGTTTCGATATGCTAAGAAAATGCATGTTTTTTTTACAAGGAAAACCTCCAGTTTGGTAGGATTAT
TTTGTTGGTATAATAAGATTCAGTTGCGCGATTATTGTAGTTTTGTTGTTCTTGTTTTTGCTGGATGTATCTATATGACCTTCCAAAATAGACAACCAACATGTATAATA
TATTGGTCAATATAACTTGTTGATAGGTTAGTTAAACAATTTGCCAACTTTCTTTATTGTGAATTAGTTAATTTTTGTGTTTCTTTAAAGTTGAGTTGTATATATAAAAG
CAATTAAGATTTTATTTTGTGCATTTATAGGTAAAAGTGAAATATTATTGTTTTTTTAAAAAAGAGAAATATTATTGATTTGCACATGCCTAAGCAATAAATAAATAAAT
AAATATATATGTAT
Protein sequenceShow/hide protein sequence
MSILYTKGTILGYKRSKLNQYPNTSFLQIKGVISKDEVSWYQGKRLSYIYKAKVKKKKSHYRCIWGKELPYSNTIQRGLYSVGEIAFANSFYY