; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G010830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G010830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNL-type domain-containing protein
Genome locationchr09:17205162..17212717
RNA-Seq ExpressionLsi09G010830
SyntenyLsi09G010830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5544688.1 hypothetical protein DKX38_012800 [Salix brachista]1.1e-0543.06Show/hide
Query:  RTIFGEGAGAVLSCESTTVG----GAG-GLGTVGAGAGDN-SGTATGAGVGGEGIGVGGVGNG-ARVGAGT-------GGVCEGVGETCGGGKGGGNGGG
        RT  G+GAG  ++   T  G    GAG G G  GAGAG + +G   GAGV G G+   G G   A  GAGT       G    G G+TCGGGK    GGG
Subjt:  RTIFGEGAGAVLSCESTTVG----GAG-GLGTVGAGAGDN-SGTATGAGVGGEGIGVGGVGNG-ARVGAGT-------GGVCEGVGETCGGGKGGGNGGG

Query:  VARGGGNAGGSDGGEMGELCGGWGGGMVGLVEGATVGGGVD----KGGGVVAVGGG----VEGGG------ETVGKL--GGCAGAWPIAEGNRKARQIRK
        VA GGG+AG   G   G LCGG GGG +GLV GAT+G G D     GGGV A+ G     VEGGG        VG++  G  +G W     N K RQ + 
Subjt:  VARGGGNAGGSDGGEMGELCGGWGGGMVGLVEGATVGGGVD----KGGGVVAVGGG----VEGGG------ETVGKL--GGCAGAWPIAEGNRKARQIRK

Query:  KGHDLEAMV
        +    +A++
Subjt:  KGHDLEAMV

KAF9674159.1 hypothetical protein SADUNF_Sadunf10G0098600 [Salix dunnii]7.4e-0745.76Show/hide
Query:  GLGTVGAGAGDNSGTATGAGVGGEGIGVGG--VGNGAR---VGAGTGGVCEGVGETCGGGKGGGNGGGVARGGGNAGGSDGGEMGELCGGWGGGMVGLVE
        G+   GAG G N G   G G+ G G G GG   G GA     GAG G  C G G+TCGGGK    GGGVA GGG+AGG  G  +GELC   GGG  GL+ 
Subjt:  GLGTVGAGAGDNSGTATGAGVGGEGIGVGG--VGNGAR---VGAGTGGVCEGVGETCGGGKGGGNGGGVARGGGNAGGSDGGEMGELCGGWGGGMVGLVE

Query:  GATVGGGVD----KGGGVVA------------VGGGVEGGGETVGKLGG-CAGAWPIAEGNRKARQIRKKGHDLEAM
        GAT+G G D     GGGV A            VGGGV   G  VGK+ G  AG W     N K RQ + +    EA+
Subjt:  GATVGGGVD----KGGGVVA------------VGGGVEGGGETVGKLGG-CAGAWPIAEGNRKARQIRKKGHDLEAM

PKI60582.1 hypothetical protein CRG98_019058 [Punica granatum]2.1e-0653.09Show/hide
Query:  GEGAGAVLSCESTTVGGAGGL-GTVGAGAGDNSGTATGAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGK--GGGNGGGVARG-GGNAGGSDGG
        GEGAGAV S   T VGGAGGL G VGAGAG       G  + GEG G    G     GAG G    G G+TCGGGK   GG+GGG A G GGNAGG  G 
Subjt:  GEGAGAVLSCESTTVGGAGGL-GTVGAGAGDNSGTATGAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGK--GGGNGGGVARG-GGNAGGSDGG

Query:  EMGELCGG-----WGGGMVGLVEGATVGGGVD----KGGGVVAVGGGV--EGGGETVGKLGG
        E G L GG     WGG   G+  GA +GGG D     GGGVVA GGGV   GGG    K GG
Subjt:  EMGELCGG-----WGGGMVGLVEGATVGGGVD----KGGGVVAVGGGV--EGGGETVGKLGG

PNT23998.1 hypothetical protein POPTR_008G110900, partial [Populus trichocarpa]1.6e-0644.33Show/hide
Query:  AVLSCESTTVGGAGGLGTVGAGAGDNSGTAT----GAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGKGGGNGGGVARGGGNAGGSDGGEMGEL
        AV S    TVGGAGGLG  GAGAG  +G +T    GAG G  G G G  G GA VGAG  G   G G +     G G+GGGVA GGG+AG   G  +G L
Subjt:  AVLSCESTTVGGAGGLGTVGAGAGDNSGTAT----GAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGKGGGNGGGVARGGGNAGGSDGGEMGEL

Query:  CGGWGGGMVGLVEGATVGGGVD--------------------KGGGVVAVGGGVEGGGETVGKLGGCAGAWPIAEGNRKARQIRKKGHDLEAMV
        C G GGG +GLV GAT+G G D                    +GGGVV VG GV   GE V   G  AG W     N K RQ   +    +A++
Subjt:  CGGWGGGMVGLVEGATVGGGVD--------------------KGGGVVAVGGGVEGGGETVGKLGGCAGAWPIAEGNRKARQIRKKGHDLEAMV

TKS15068.1 hypothetical protein D5086_0000037350 [Populus alba]3.6e-0642.44Show/hide
Query:  FGEGAGAVLSCESTTVGGAGGLGTVGAGA------GDNSGTATGAGVGGEGIGVGG-----------VGNGARVG-AGTGGVCEGVGETCGGGKGGGNGG
        F   A AV S    TVGGAGGLG  GAGA      G N G   G G+ G G G GG            G+GA  G AG GG   G G+TCGGGK      
Subjt:  FGEGAGAVLSCESTTVGGAGGLGTVGAGA------GDNSGTATGAGVGGEGIGVGG-----------VGNGARVG-AGTGGVCEGVGETCGGGKGGGNGG

Query:  GVARGGGNAGGSDGGEMGELCGGWGGGMVGLVEGATVGGGVD----KGGGVVAVGGG--------VEGGGETVGKLGGCAGAWPIAEGNRKARQIRKKGH
            GGG AGG  G   GELC   GGG  G+V GAT+G G D     GGGV A+ G         V GGG  VG  G  AG W     + K RQ + +  
Subjt:  GVARGGGNAGGSDGGEMGELCGGWGGGMVGLVEGATVGGGVD----KGGGVVAVGGG--------VEGGGETVGKLGGCAGAWPIAEGNRKARQIRKKGH

Query:  DLEAM
          EA+
Subjt:  DLEAM

TrEMBL top hitse value%identityAlignment
A0A2I0JWF1 Uncharacterized protein1.0e-0653.09Show/hide
Query:  GEGAGAVLSCESTTVGGAGGL-GTVGAGAGDNSGTATGAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGK--GGGNGGGVARG-GGNAGGSDGG
        GEGAGAV S   T VGGAGGL G VGAGAG       G  + GEG G    G     GAG G    G G+TCGGGK   GG+GGG A G GGNAGG  G 
Subjt:  GEGAGAVLSCESTTVGGAGGL-GTVGAGAGDNSGTATGAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGK--GGGNGGGVARG-GGNAGGSDGG

Query:  EMGELCGG-----WGGGMVGLVEGATVGGGVD----KGGGVVAVGGGV--EGGGETVGKLGG
        E G L GG     WGG   G+  GA +GGG D     GGGVVA GGGV   GGG    K GG
Subjt:  EMGELCGG-----WGGGMVGLVEGATVGGGVD----KGGGVVAVGGGV--EGGGETVGKLGG

A0A2K1ZFE8 DNL-type domain-containing protein (Fragment)7.9e-0744.33Show/hide
Query:  AVLSCESTTVGGAGGLGTVGAGAGDNSGTAT----GAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGKGGGNGGGVARGGGNAGGSDGGEMGEL
        AV S    TVGGAGGLG  GAGAG  +G +T    GAG G  G G G  G GA VGAG  G   G G +     G G+GGGVA GGG+AG   G  +G L
Subjt:  AVLSCESTTVGGAGGLGTVGAGAGDNSGTAT----GAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGKGGGNGGGVARGGGNAGGSDGGEMGEL

Query:  CGGWGGGMVGLVEGATVGGGVD--------------------KGGGVVAVGGGVEGGGETVGKLGGCAGAWPIAEGNRKARQIRKKGHDLEAMV
        C G GGG +GLV GAT+G G D                    +GGGVV VG GV   GE V   G  AG W     N K RQ   +    +A++
Subjt:  CGGWGGGMVGLVEGATVGGGVD--------------------KGGGVVAVGGGVEGGGETVGKLGGCAGAWPIAEGNRKARQIRKKGHDLEAMV

A0A4U5NPX3 Uncharacterized protein1.5e-0544.5Show/hide
Query:  GRTIFGEGAGAVLSCESTTVGGAG-GLGTVGAGAGDNSGTATGAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGKGGGNGGGVARGGGNAGGSD
        G  I G GAGA ++     V GAG G G VGAGAG  +G   GAGV G G G    G+GA  G    G   G G+T GGGK    GGGVA GGG+AG   
Subjt:  GRTIFGEGAGAVLSCESTTVGGAG-GLGTVGAGAGDNSGTATGAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGKGGGNGGGVARGGGNAGGSD

Query:  GGEMGELCGGWGGGMVGLVEGATVGGGVD----KGGGVVA-------VGGGVEGGG-ETVGKL-------GGCAGAWPIAEGNRKARQIRKKGHDLEAMV
        G  +G LC G GGG +GLV GAT+G G D     GG V+A       V G VEGGG E VG +       G  AG W     N K RQ   +    +A++
Subjt:  GGEMGELCGGWGGGMVGLVEGATVGGGVD----KGGGVVA-------VGGGVEGGG-ETVGKL-------GGCAGAWPIAEGNRKARQIRKKGHDLEAMV

A0A4U5QVH9 Uncharacterized protein1.8e-0642.44Show/hide
Query:  FGEGAGAVLSCESTTVGGAGGLGTVGAGA------GDNSGTATGAGVGGEGIGVGG-----------VGNGARVG-AGTGGVCEGVGETCGGGKGGGNGG
        F   A AV S    TVGGAGGLG  GAGA      G N G   G G+ G G G GG            G+GA  G AG GG   G G+TCGGGK      
Subjt:  FGEGAGAVLSCESTTVGGAGGLGTVGAGA------GDNSGTATGAGVGGEGIGVGG-----------VGNGARVG-AGTGGVCEGVGETCGGGKGGGNGG

Query:  GVARGGGNAGGSDGGEMGELCGGWGGGMVGLVEGATVGGGVD----KGGGVVAVGGG--------VEGGGETVGKLGGCAGAWPIAEGNRKARQIRKKGH
            GGG AGG  G   GELC   GGG  G+V GAT+G G D     GGGV A+ G         V GGG  VG  G  AG W     + K RQ + +  
Subjt:  GVARGGGNAGGSDGGEMGELCGGWGGGMVGLVEGATVGGGVD----KGGGVVAVGGG--------VEGGGETVGKLGGCAGAWPIAEGNRKARQIRKKGH

Query:  DLEAM
          EA+
Subjt:  DLEAM

A0A5N5LQ22 Uncharacterized protein5.1e-0643.06Show/hide
Query:  RTIFGEGAGAVLSCESTTVG----GAG-GLGTVGAGAGDN-SGTATGAGVGGEGIGVGGVGNG-ARVGAGT-------GGVCEGVGETCGGGKGGGNGGG
        RT  G+GAG  ++   T  G    GAG G G  GAGAG + +G   GAGV G G+   G G   A  GAGT       G    G G+TCGGGK    GGG
Subjt:  RTIFGEGAGAVLSCESTTVG----GAG-GLGTVGAGAGDN-SGTATGAGVGGEGIGVGGVGNG-ARVGAGT-------GGVCEGVGETCGGGKGGGNGGG

Query:  VARGGGNAGGSDGGEMGELCGGWGGGMVGLVEGATVGGGVD----KGGGVVAVGGG----VEGGG------ETVGKL--GGCAGAWPIAEGNRKARQIRK
        VA GGG+AG   G   G LCGG GGG +GLV GAT+G G D     GGGV A+ G     VEGGG        VG++  G  +G W     N K RQ + 
Subjt:  VARGGGNAGGSDGGEMGELCGGWGGGMVGLVEGATVGGGVD----KGGGVVAVGGG----VEGGG------ETVGKL--GGCAGAWPIAEGNRKARQIRK

Query:  KGHDLEAMV
        +    +A++
Subjt:  KGHDLEAMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGCACCATATTTGGTGAGGGTGCTGGCGCTGTGCTATCTTGTGAATCCACCACCGTAGGTGGTGCCGGTGGGCTCGGGACGGTTGGGGCCGGGGCCGGGGATAA
TTCTGGCACCGCGACGGGTGCTGGTGTTGGTGGTGAAGGCATTGGTGTTGGCGGAGTTGGTAATGGTGCTAGGGTGGGAGCTGGCACCGGTGGTGTCTGTGAAGGAGTTG
GAGAGACTTGTGGTGGTGGCAAAGGAGGCGGCAATGGCGGAGGCGTAGCGCGCGGAGGTGGCAATGCTGGTGGTAGCGACGGGGGCGAGATGGGTGAACTTTGTGGTGGT
TGGGGTGGTGGAATGGTTGGGCTTGTAGAAGGTGCAACAGTAGGAGGTGGTGTTGACAAGGGTGGAGGAGTTGTTGCGGTCGGAGGTGGGGTAGAAGGCGGTGGGGAGAC
GGTTGGCAAGCTGGGTGGCTGTGCCGGGGCCTGGCCGATCGCGGAAGGGAATAGAAAGGCAAGGCAGATTAGAAAAAAAGGCCATGATTTGGAAGCCATGGTTGGAGATG
GGAAT
mRNA sequenceShow/hide mRNA sequence
AATTCTCTATCAAGGTGACCAGTAAGAATGATCTAATGGGGCGCACCATATTTGGTGAGGGTGCTGGCGCTGTGCTATCTTGTGAATCCACCACCGTAGGTGGTGCCGGT
GGGCTCGGGACGGTTGGGGCCGGGGCCGGGGATAATTCTGGCACCGCGACGGGTGCTGGTGTTGGTGGTGAAGGCATTGGTGTTGGCGGAGTTGGTAATGGTGCTAGGGT
GGGAGCTGGCACCGGTGGTGTCTGTGAAGGAGTTGGAGAGACTTGTGGTGGTGGCAAAGGAGGCGGCAATGGCGGAGGCGTAGCGCGCGGAGGTGGCAATGCTGGTGGTA
GCGACGGGGGCGAGATGGGTGAACTTTGTGGTGGTTGGGGTGGTGGAATGGTTGGGCTTGTAGAAGGTGCAACAGTAGGAGGTGGTGTTGACAAGGGTGGAGGAGTTGTT
GCGGTCGGAGGTGGGGTAGAAGGCGGTGGGGAGACGGTTGGCAAGCTGGGTGGCTGTGCCGGGGCCTGGCCGATCGCGGAAGGGAATAGAAAGGCAAGGCAGATTAGAAA
AAAAGGCCATGATTTGGAAGCCATGGTTGGAGATGGGAAT
Protein sequenceShow/hide protein sequence
MGRTIFGEGAGAVLSCESTTVGGAGGLGTVGAGAGDNSGTATGAGVGGEGIGVGGVGNGARVGAGTGGVCEGVGETCGGGKGGGNGGGVARGGGNAGGSDGGEMGELCGG
WGGGMVGLVEGATVGGGVDKGGGVVAVGGGVEGGGETVGKLGGCAGAWPIAEGNRKARQIRKKGHDLEAMVGDGN