; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G011070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G011070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L37a
Genome locationchr09:17708441..17710914
RNA-Seq ExpressionLsi09G011070
SyntenyLsi09G011070
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1873427.1 hypothetical protein Lal_00027465, partial [Lupinus albus]1.1e-4082.88Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVR
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGKV           G   F +++YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVR
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVR

Query:  STIRRLREQTE
        STIRRLREQTE
Subjt:  STIRRLREQTE

KAF7137563.1 hypothetical protein RHSIM_Rhsim07G0119700 [Rhododendron simsii]5.1e-4384.07Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        +TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         C G     N L+YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTES
        RSTIRRLREQTES
Subjt:  RSTIRRLREQTES

KAG6504215.1 hypothetical protein ZIOFF_036546 [Zingiber officinale]4.8e-4176.86Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDL--------KYAVKRKAVGIWGCKDCGKVKAGGAYTL
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK  +     +   G + F+ L        ++AVKRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDL--------KYAVKRKAVGIWGCKDCGKVKAGGAYTL

Query:  NTASAVTVRSTIRRLREQTES
        NTASAVTVRSTIRRLREQTES
Subjt:  NTASAVTVRSTIRRLREQTES

KVH88611.1 hypothetical protein Ccrd_026305 [Cynara cardunculus var. scolymus]1.6e-4182.3Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK++  +    C          +YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTES
        RSTIRRLREQTES
Subjt:  RSTIRRLREQTES

OVA06874.1 Ribosomal protein L37ae [Macleaya cordata]2.8e-4182.14Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK  H             F+   YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTE
        RSTIRRLREQTE
Subjt:  RSTIRRLREQTE

TrEMBL top hitse value%identityAlignment
A0A103XDD5 Uncharacterized protein7.9e-4282.3Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK++  +    C          +YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTES
        RSTIRRLREQTES
Subjt:  RSTIRRLREQTES

A0A1U7XSD1 60S ribosomal protein L37a4.3e-4081.42Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCG                     KYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTES
        RSTIRRLREQTES
Subjt:  RSTIRRLREQTES

A0A200Q8W6 Ribosomal protein L37ae1.3e-4182.14Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK  H             F+   YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTE
        RSTIRRLREQTE
Subjt:  RSTIRRLREQTE

A0A6A5MJL7 Uncharacterized protein (Fragment)5.1e-4182.88Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVR
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGKV           G   F +++YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVR
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVR

Query:  STIRRLREQTE
        STIRRLREQTE
Subjt:  STIRRLREQTE

A0A6J1ICH2 60S ribosomal protein L37a4.3e-4081.42Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCG                     KYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTES
        RSTIRRLREQTES
Subjt:  RSTIRRLREQTES

SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-11.3e-4178.76Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCG                     K+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTES
        RSTIRRLREQTE+
Subjt:  RSTIRRLREQTES

P0DKK2 60S ribosomal protein L37a-21.3e-4178.76Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCG                     K+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTES
        RSTIRRLREQTE+
Subjt:  RSTIRRLREQTES

Q9SRK6 Putative 60S ribosomal protein L37a-12.5e-4076.99Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCG                     KY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTES
        RSTIRRLREQTES
Subjt:  RSTIRRLREQTES

Q9XHE4 60S ribosomal protein L37a1.0e-4180.53Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCG                     KYAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTES
        RSTIRRLREQTES
Subjt:  RSTIRRLREQTES

Q9ZRS8 60S ribosomal protein L37a8.4e-4178.57Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCG                     K+AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTE
        RSTIRRLREQTE
Subjt:  RSTIRRLREQTE

Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein1.7e-4176.99Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCG                     KY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTES
        RSTIRRLREQTES
Subjt:  RSTIRRLREQTES

AT3G60245.1 Zinc-binding ribosomal protein family protein8.6e-4175.89Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV
        M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCG                     KY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTV

Query:  RSTIRRLREQTE
        RSTIRRLREQ E
Subjt:  RSTIRRLREQTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGAGAACGAAGAAGGCTGGCATCGTTGGCAAGTATGGCACTCGTTATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTCAGTCAGCACAGCAAGTA
CTTCTGTGAGTTTTGTGGAAAGGTACAACATTGTTTAGAACGGTCTCTATGTGATGGGGGTCCTTACTGTTTTAATGACCTGAAGTATGCCGTGAAGAGAAAGGCTGTTG
GAATATGGGGTTGCAAAGATTGTGGTAAAGTGAAAGCAGGAGGGGCTTACACATTGAATACTGCTAGTGCCGTCACTGTGAGGAGTACCATTAGAAGGTTGAGGGAGCAG
ACAGAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
AACAATTTCTAGGTTCCATTTGCCACACGTATAAAACCAATAAACCATTAAAGCCTTCGTTCAGCCGCGCTGGGAATTGTTGAAGATTTCTAGGGTTTCTGCTCTCTCTC
GCTAATTCGCCAAAATGACAAAGAGAACGAAGAAGGCTGGCATCGTTGGCAAGTATGGCACTCGTTATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTCAGT
CAGCACAGCAAGTACTTCTGTGAGTTTTGTGGAAAGGTACAACATTGTTTAGAACGGTCTCTATGTGATGGGGGTCCTTACTGTTTTAATGACCTGAAGTATGCCGTGAA
GAGAAAGGCTGTTGGAATATGGGGTTGCAAAGATTGTGGTAAAGTGAAAGCAGGAGGGGCTTACACATTGAATACTGCTAGTGCCGTCACTGTGAGGAGTACCATTAGAA
GGTTGAGGGAGCAGACAGAAAGCTAAGTTAACTTCCAGATTTATCGTTCGAGGTTGCACGTAGTAATTTTGTTGAGGTTCTCGAGTTGTCTTTAGTTTCCATATATTTTT
GCCGAATTTGAATCTTCTCAAACGAAAAGTTCAGAAATTAATCAGTTTGTTGAATCTACTTTTGACGATAATGAATGTGGGATATTTATTTTAGAATTTGTATTTTAGTT
TAGTATAAGCTAGTAATTCTCTATATATTGAAGTTTAATTGGATGGTATTTATGATGTGGTCATTTATTCCTTGCTGCGAACCCTTCCAATCATATCCGGGGTTGTTTGA
TTTAGAATTATTTGGTTTGAACTTCAAATCTTTCTGTAAGACTGAATCAATTGAAAATAGACTATAAAATGATCAACCAAGATTTGTTTGATTGTGATA
Protein sequenceShow/hide protein sequence
MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKVQHCLERSLCDGGPYCFNDLKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQ
TES