CuGenDBv2

Gene ID	Lsi09G011260
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ATP synthase subunit beta, chloroplastic
Genome location	chr09:18057405..18062551
RNA-Seq Expression	Lsi09G011260
Synteny	Lsi09G011260
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

AAK72821.1 ATP synthase beta subunit, partial [Pedicularis sp. 'coronata']

5.0e-15

82.69

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DTRAPLSVPVG ATL RIFNVLGEP+DNLGP +T   F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

AOO76907.1 ATP synthase beta subunit, partial [Petrocodon coccineus]

2.3e-15

82.69

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DTRAPLSVPVG ATL RIFNVLGEP+DNLGP +T   F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

CAB65316.1 ATP synthase beta subunit, partial [Olea europaea]

5.0e-15

82.69

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DTRAPLSVPVG ATL RIFNVLGEP+DNLGP +T   F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

YP_009751406.1 ATP synthase CF1 beta subunit [Pedicularis oederi]

5.0e-15

82.69

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DTRAPLSVPVG ATL RIFNVLGEP+DNLGP +T   F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

YP_010128870.1 ATP synthase subunit beta [Pedicularis dissecta]

5.0e-15

82.69

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DTRAPLSVPVG ATL RIFNVLGEP+DNLGP +T   F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

TrEMBL top hits

e value

%identity

Alignment

A0A343UZL1 ATP synthase subunit beta, chloroplastic

2.4e-15

82.69

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DTRAPLSVPVG ATL RIFNVLGEP+DNLGP +T   F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

A0A6G7SE33 ATP synthase subunit beta, chloroplastic

2.4e-15

82.69

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DTRAPLSVPVG ATL RIFNVLGEP+DNLGP +T   F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

A0A6G7SEF1 ATP synthase subunit beta, chloroplastic

2.4e-15

82.69

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DTRAPLSVPVG ATL RIFNVLGEP+DNLGP +T   F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

A0A7T1X4J9 ATP synthase CF1 beta subunit

2.4e-15

82.69

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DTRAPLSVPVG ATL RIFNVLGEP+DNLGP +T   F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

Q9SC51 ATP synthase subunit beta (Fragment)

2.4e-15

82.69

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DTRAPLSVPVG ATL RIFNVLGEP+DNLGP +T   F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

SwissProt top hits

e value

%identity

Alignment

O03081 ATP synthase subunit beta, chloroplastic

3.3e-17

80.39

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRK
        MSATDGL RGMEV+DT APLSVPVG+ATL RIFNVLGEP+DNLGP N ++K
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRK

P0C2Z7 ATP synthase subunit beta, chloroplastic

3.3e-17

80.77

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DT APLSVPVG ATL RIFNVLGEP+DNLGP +T+  F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

P0C2Z8 ATP synthase subunit beta, chloroplastic

3.3e-17

80.77

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DT APLSVPVG ATL RIFNVLGEP+DNLGP +T+  F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

P12085 ATP synthase subunit beta, chloroplastic

3.3e-17

80.77

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DT APLSVPVG ATL RIFNVLGEP+DNLGP +T+  F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

Q6ENG7 ATP synthase subunit beta, chloroplastic

3.3e-17

80.77

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF
        MSATDGLMRGMEV+DT APLSVPVG ATL RIFNVLGEP+DNLGP +T+  F
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKF

Arabidopsis top hits

e value

%identity

Alignment

AT5G08670.1 ATP synthase alpha/beta family protein

8.0e-11

60.42

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNT
        M  T+GL+RG +V++T AP++VPVG+ATL RI NVLGEPID  G   T
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNT

AT5G08680.1 ATP synthase alpha/beta family protein

8.0e-11

60.42

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNT
        M  T+GL+RG +V++T AP++VPVG+ATL RI NVLGEPID  G   T
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNT

AT5G08690.1 ATP synthase alpha/beta family protein

8.0e-11

60.42

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNT
        M  T+GL+RG +V++T AP++VPVG+ATL RI NVLGEPID  G   T
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNT

ATCG00480.1 ATP synthase subunit beta

5.4e-15

77.08

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Query:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNT
        MSAT+GL RGM+VVD   PLSVPVG ATL RIFNVLGEP+DNLGP +T
Subjt:  MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNT

Sequences

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CDS sequence

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ATGAGTGCTACAGATGGTCTAATGAGAGGAATGGAAGTGGTTGACACGAGAGCTCCTCTAAGTGTTCCAGTCGGCAAAGCGACTCTCGAACGAATTTTCAATGTGCTTGG
AGAGCCTATTGATAATTTGGGTCCTTATAATACGAATCGAAAATTCGAACCACAAATTGCA

mRNA sequence

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ATACTGCCGGTCAAGAAATTAATGTGACTTGTGAAGTACAGCAATTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAGATGGTCTAATGAGAGGAATG
GAAGTGGTTGACACGAGAGCTCCTCTAAGTGTTCCAGTCGGCAAAGCGACTCTCGAACGAATTTTCAATGTGCTTGGAGAGCCTATTGATAATTTGGGTCCTTATAATAC
GAATCGAAAATTCGAACCACAAATTGCA

Protein sequence

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MSATDGLMRGMEVVDTRAPLSVPVGKATLERIFNVLGEPIDNLGPYNTNRKFEPQIA

Lsi09G011260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome