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Lsi09G011430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G011430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionubiquitin-conjugating enzyme E2 E2-like
Genome locationchr09:18342149..18344529
RNA-Seq ExpressionLsi09G011430
SyntenyLsi09G011430
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651768.1 hypothetical protein Csa_005897 [Cucumis sativus]8.1e-2473.68Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN
        IFH NV +DGSI +DILNENWSSALTIEK+LLSICSILS+PI   S NEAS M+LNNW++FN  A++WTK+YAMPN
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN

XP_004139007.1 ubiquitin-conjugating enzyme E2 5A [Cucumis sativus]8.1e-2473.68Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN
        IFH NV +DGSI +DILNENWSSALTIEK+LLSICSILS+PI   S NEAS M+LNNW++FN  A++WTK+YAMPN
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN

XP_008457245.1 PREDICTED: ubiquitin-conjugating enzyme E2 D1-like [Cucumis melo]4.8e-2476Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMP
        IFH NV LDGSI +DIL ENWSSALTIEK+LLSICS+LS+PI Q S NEAS M+LN+W+NFN IAR+WTK+YAMP
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMP

XP_022138687.1 ubiquitin-conjugating enzyme E2 5A-like [Momordica charantia]2.4e-2068.42Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN
        IFH N+  DG+I++DIL ENWS ALTIEK+LLSICSILS+P +Q+SINEAS MY N +  F  +AREWTKIYAMP+
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN

XP_038907075.1 ubiquitin-conjugating enzyme E2 D1-like [Benincasa hispida]7.8e-2780.26Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN
        IFH NVG DG+I++DILNENWSSALTIEK+LLSICSILS+PI Q SINEAS MYL+NW+N++ IAREWTKIYAMPN
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN

TrEMBL top hitse value%identityAlignment
A0A0A0LI75 UBC core domain-containing protein3.9e-2473.68Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN
        IFH NV +DGSI +DILNENWSSALTIEK+LLSICSILS+PI   S NEAS M+LNNW++FN  A++WTK+YAMPN
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN

A0A1S3C6C4 ubiquitin-conjugating enzyme E2 D1-like2.3e-2476Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMP
        IFH NV LDGSI +DIL ENWSSALTIEK+LLSICS+LS+PI Q S NEAS M+LN+W+NFN IAR+WTK+YAMP
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMP

A0A6J1CDR5 ubiquitin-conjugating enzyme E2 5A-like1.2e-2068.42Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN
        IFH N+  DG+I++DIL ENWS ALTIEK+LLSICSILS+P +Q+SINEAS MY N +  F  +AREWTKIYAMP+
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN

A0A6J1HIF1 ubiquitin-conjugating enzyme E2 E2-like2.2e-1966.23Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDP-ISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN
        IFH N+  DG+I +DIL +NWS ALTIE ++LSICSILS+P   + SINEASRM+LNNW+N+  IAREWTK YAM N
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDP-ISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN

A0A6J1KCF2 ubiquitin-conjugating enzyme E2 E3-like2.9e-1967.53Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDP-ISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN
        IFH NV  DG+I +DIL +NWS ALTIE ++LSICSILS+P   + SINEASRM+LNNW+N+  IAREWTK YAM N
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDP-ISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN

SwissProt top hitse value%identityAlignment
P62837 Ubiquitin-conjugating enzyme E2 D22.1e-1454.67Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM
        I+H N+  +GSI LDIL   WS ALTI KVLLSICS+L DP   D  + E +R+Y  +   +N IAREWT+ YAM
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM

P62838 Ubiquitin-conjugating enzyme E2 D22.1e-1454.67Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM
        I+H N+  +GSI LDIL   WS ALTI KVLLSICS+L DP   D  + E +R+Y  +   +N IAREWT+ YAM
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM

P62839 Ubiquitin-conjugating enzyme E2 D22.1e-1454.67Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM
        I+H N+  +GSI LDIL   WS ALTI KVLLSICS+L DP   D  + E +R+Y  +   +N IAREWT+ YAM
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM

P62840 Ubiquitin-conjugating enzyme E2 D22.1e-1454.67Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM
        I+H N+  +GSI LDIL   WS ALTI KVLLSICS+L DP   D  + E +R+Y  +   +N IAREWT+ YAM
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM

Q1RMX2 Ubiquitin-conjugating enzyme E2 D22.1e-1454.67Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM
        I+H N+  +GSI LDIL   WS ALTI KVLLSICS+L DP   D  + E +R+Y  +   +N IAREWT+ YAM
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM

Arabidopsis top hitse value%identityAlignment
AT1G64230.1 ubiquitin-conjugating enzyme 283.3e-1553.33Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM
        +FH NV  +GSI LDIL E WS ALTI KVLLSICS+L+DP   D  + E + MY  +   +   AR WT+ YAM
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM

AT1G64230.2 ubiquitin-conjugating enzyme 283.3e-1553.33Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM
        +FH NV  +GSI LDIL E WS ALTI KVLLSICS+L+DP   D  + E + MY  +   +   AR WT+ YAM
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM

AT1G64230.3 ubiquitin-conjugating enzyme 283.3e-1553.33Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM
        +FH NV  +GSI LDIL E WS ALTI KVLLSICS+L+DP   D  + E + MY  +   +   AR WT+ YAM
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM

AT1G64230.4 ubiquitin-conjugating enzyme 283.3e-1553.33Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM
        +FH NV  +GSI LDIL E WS ALTI KVLLSICS+L+DP   D  + E + MY  +   +   AR WT+ YAM
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM

AT1G64230.5 ubiquitin-conjugating enzyme 283.3e-1553.33Show/hide
Query:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM
        +FH NV  +GSI LDIL E WS ALTI KVLLSICS+L+DP   D  + E + MY  +   +   AR WT+ YAM
Subjt:  IFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDS-INEASRMYLNNWVNFNGIAREWTKIYAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATATCTTCCATCTAAATGTAGGGTTAGATGGAAGCATTTATTTGGACATATTGAATGAAAATTGGTCTTCAGCATTGACTATTGAGAAAGTTCTACTTTCAATATG
CTCAATCCTTTCAGACCCAATTTCTCAAGACTCCATTAATGAAGCTTCAAGAATGTACCTCAACAATTGGGTCAATTTCAATGGGATTGCAAGAGAATGGACCAAAATAT
ATGCAATGCCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATATCTTCCATCTAAATGTAGGGTTAGATGGAAGCATTTATTTGGACATATTGAATGAAAATTGGTCTTCAGCATTGACTATTGAGAAAGTTCTACTTTCAATATG
CTCAATCCTTTCAGACCCAATTTCTCAAGACTCCATTAATGAAGCTTCAAGAATGTACCTCAACAATTGGGTCAATTTCAATGGGATTGCAAGAGAATGGACCAAAATAT
ATGCAATGCCAAATTGATCATCTCATCACTAGACAAACACCATCATATTGTAAATAGTTATATTATATGCACCAAATAGTATGTAATGAAATATCATTCAATTGATTTTT
GGGCTTCTAAAAGCTTGGATTTTGATATTGGTGAATGTTTTGTATTAACCTTGTATTACCTTTGCCAAGCCCAACATTGTATTTGATTGTATAATAATTTTACTTTCTAA
ATTACTTTCTAAATTGTTTTGAATCTTATTTTTTTCCTTTAAAAACATTCGTTTGAACCATTAAAAAGTCATTCCAAACGGGTTTATACTCTTATTTCT
Protein sequenceShow/hide protein sequence
MYIFHLNVGLDGSIYLDILNENWSSALTIEKVLLSICSILSDPISQDSINEASRMYLNNWVNFNGIAREWTKIYAMPN