CuGenDBv2

Gene ID	Lsi09G011500
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	60S ribosomal protein L13a, putative
Genome location	chr09:18445172..18447255
RNA-Seq Expression	Lsi09G011500
Synteny	Lsi09G011500
Gene Ontology terms	GO:0017148 - negative regulation of translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR005755 - Ribosomal protein L13, eukaryotic/archaeal IPR005822 - Ribosomal protein L13 IPR023563 - Ribosomal protein L13, conserved site IPR036899 - Ribosomal protein L13 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450411.1 PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo]

1.9e-103

83.27

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        ERKRKER+QAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

XP_022964267.1 60S ribosomal protein L13a-4 [Cucurbita moschata]

5.6e-103

82.86

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        ERKRKERAQAAYE+KKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

XP_022999881.1 60S ribosomal protein L13a-4 [Cucurbita maxima]

1.2e-102

82.45

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLKAYEGVPPPYDK+K+MVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        ERKRKERAQAAYE+KKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

XP_023547438.1 60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo]

7.3e-103

82.86

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGP LEVIAPIKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

XP_038906567.1 60S ribosomal protein L13a-4 [Benincasa hispida]

1.5e-103

83.67

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLKAYEGVPPPY+KMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL54 Uncharacterized protein

9.2e-104

83.27

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        ERKRKER+QAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

A0A1S3C555 60S ribosomal protein L13a-4

9.2e-104

83.27

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        ERKRKER+QAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

A0A5A7SQ28 60S ribosomal protein L13a-4

9.2e-104

83.27

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        ERKRKER+QAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

A0A6J1HHD3 60S ribosomal protein L13a-4

2.7e-103

82.86

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        ERKRKERAQAAYE+KKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

A0A6J1KEC1 60S ribosomal protein L13a-4

6.0e-103

82.45

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLKAYEGVPPPYDK+K+MVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        ERKRKERAQAAYE+KKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

SwissProt top hits

e value

%identity

Alignment

O49885 60S ribosomal protein L13a

5.1e-91

70.61

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGI AKRVVVDARHHMLGRLASI+AKELLNGQKVV+VR EEICISGGLVRQKMKY+RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
          ALARLK YEG+PPP+DK KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        E+KRKER+Q  YERKKQLNKLR+KAE+VA+EKLG QL+++AP+KY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

Q9FKC0 60S ribosomal protein L13a-4

6.6e-99

75.92

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        E KRKERA   YERKKQLNKLR+KAEKVAEEKLG QL+++AP+KY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

Q9LRX8 60S ribosomal protein L13a-2

2.1e-97

76.33

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRLASIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        E KRKER+QA YERKKQL KLR KAEKVAEEKLG QL+V+A IKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

Q9SFU1 60S ribosomal protein L13a-1

1.2e-97

74.69

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        A ALARLK +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        E KRKERAQA YERKKQL+KLR KAEKVAEEKLG QL+V+AP+KY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

Q9SVR0 60S ribosomal protein L13a-3

4.7e-97

74.69

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLK +EG+PPPYDK+KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        E KRKER+Q  YERKKQLNKLR KAEKVAEE+LG QL+V+AP+KY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

Arabidopsis top hits

e value

%identity

Alignment

AT3G07110.1 Ribosomal protein L13 family protein

8.8e-99

74.69

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        A ALARLK +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        E KRKERAQA YERKKQL+KLR KAEKVAEEKLG QL+V+AP+KY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

AT3G07110.2 Ribosomal protein L13 family protein

1.5e-98

74.69

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Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        A ALARLK +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        E KRKERAQA YERKKQL+KLR KAEKVAEEKLG QL+V+AP+KY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

AT3G24830.1 Ribosomal protein L13 family protein

1.5e-98

76.33

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Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRLASIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        E KRKER+QA YERKKQL KLR KAEKVAEEKLG QL+V+A IKY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

AT5G48760.1 Ribosomal protein L13 family protein

4.7e-100

75.92

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Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        E KRKERA   YERKKQLNKLR+KAEKVAEEKLG QL+++AP+KY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

AT5G48760.2 Ribosomal protein L13 family protein

4.7e-100

75.92

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Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                                       EL
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILEL

Query:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY
        E KRKERA   YERKKQLNKLR+KAEKVAEEKLG QL+++AP+KY
Subjt:  ERKRKERAQAAYERKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

Sequences

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CDS sequence

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ATGGTGTCCGGTTCCGGTATCTGTGCCAAGCGCGTCGTCGTTGACGCCAGGCATCACATGTTGGGAAGGCTCGCTTCCATTATCGCCAAAGAGCTACTCAATGGACAGAA
AGTTGTGGTCGTCAGGTGCGAGGAGATCTGCATCTCCGGCGGATTGGTTCGCCAAAAGATGAAGTACATGCGTTTCTTGAGGAAACGAATGAACACCAAGCCTTCTCATG
GCCCCATTCATTTCCGTGCCCCCGCTAAGATCCTTTGGCGCACCATTCGTGGGATGATTCCCCATAAGACTAAGCGTGGTGCGGCGGCTCTTGCCCGTTTGAAGGCGTAC
GAGGGTGTTCCTCCTCCGTACGATAAGATGAAGAGGATGGTCATCCCTGATGCTCTCAAGGTCTTGAGGCTTCAAGCTGGACATAAGTACTGCTTGTTGGGCAGACTCTC
TTCGGAGGTTGGATGGAACCATTATGATACCATCAAGGTAAGAATGCCATCCGCTCTGAAATTAGTGCATATTGTTGCGAACTGTGTCTCAATGAATTTTATTGTGCATA
TTGTTACGAACTCATGTTGCTGTTTGGAGTTGAAGTATATTTTGGAACTGGAGAGGAAGAGAAAGGAAAGAGCCCAGGCTGCTTATGAGAGAAAGAAACAGTTAAATAAG
CTGAGGATTAAAGCCGAGAAGGTTGCTGAGGAGAAGCTCGGTCCCCAACTTGAAGTTATTGCTCCTATCAAATACTAA

mRNA sequence

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GAAAAACCCTAGCAACTCCAACCATTTCCCTCACAGAAAAGAAGAAGAAGACGATAGCCGCTCGAGGCTTTTGCACAGAGAAACAAGAAGGATGGTGTCCGGTTCCGGTA
TCTGTGCCAAGCGCGTCGTCGTTGACGCCAGGCATCACATGTTGGGAAGGCTCGCTTCCATTATCGCCAAAGAGCTACTCAATGGACAGAAAGTTGTGGTCGTCAGGTGC
GAGGAGATCTGCATCTCCGGCGGATTGGTTCGCCAAAAGATGAAGTACATGCGTTTCTTGAGGAAACGAATGAACACCAAGCCTTCTCATGGCCCCATTCATTTCCGTGC
CCCCGCTAAGATCCTTTGGCGCACCATTCGTGGGATGATTCCCCATAAGACTAAGCGTGGTGCGGCGGCTCTTGCCCGTTTGAAGGCGTACGAGGGTGTTCCTCCTCCGT
ACGATAAGATGAAGAGGATGGTCATCCCTGATGCTCTCAAGGTCTTGAGGCTTCAAGCTGGACATAAGTACTGCTTGTTGGGCAGACTCTCTTCGGAGGTTGGATGGAAC
CATTATGATACCATCAAGGTAAGAATGCCATCCGCTCTGAAATTAGTGCATATTGTTGCGAACTGTGTCTCAATGAATTTTATTGTGCATATTGTTACGAACTCATGTTG
CTGTTTGGAGTTGAAGTATATTTTGGAACTGGAGAGGAAGAGAAAGGAAAGAGCCCAGGCTGCTTATGAGAGAAAGAAACAGTTAAATAAGCTGAGGATTAAAGCCGAGA
AGGTTGCTGAGGAGAAGCTCGGTCCCCAACTTGAAGTTATTGCTCCTATCAAATACTAATTTGTGATTTTGATCTCAGAAACAGAGATACTGGAGAATTGAGTTGCAGTT
GAATTGCATTTTTCAATTTTGATAACATTTATCTTTATTAGTAGACATGATACATCTCTGTATGCTTCTAGGATTCTTCAGTTTAGTCAAGTTTTTGATACTTTTTGTTA
TGCATGTCGAGTAGATTCACGATGACTGTTTATTCTAAACAAAAATGTCTTGATTCCTTGGCTATGCATATCGTTGTGTTTGAACTTTGCAGTTGATTTTCAAAGATTTG
CTTAAAAAATTGGTCTGTTTAAATTCCAAACCTTAATGTTTGTGGGCTAGAAAATAAGAATTGGATTCTCATTTTGCAAATGAATCTCTTTCTTATAATGGTGTAAGAAT
CTTGGAGATTTGGAACCTTATTAAGGTAATATTGCATTAGGCGTTCTACTATT

Protein sequence

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MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAY
EGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVRMPSALKLVHIVANCVSMNFIVHIVTNSCCCLELKYILELERKRKERAQAAYERKKQLNK
LRIKAEKVAEEKLGPQLEVIAPIKY

Lsi09G011500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome