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Lsi09G011520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G011520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncytochrome b5-like
Genome locationchr09:18461940..18465693
RNA-Seq ExpressionLsi09G011520
SyntenyLsi09G011520
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138957.1 cytochrome b5 [Cucumis sativus]1.4e-4793.33Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARE MSKYYVGEIDIST+PE+ TYT PKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y KS+
Subjt:  YTKST

XP_008457249.1 PREDICTED: cytochrome b5-like [Cucumis melo]7.7e-4995.24Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYY+GEIDISTIPEQ TYT PKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y KS+
Subjt:  YTKST

XP_022138846.1 cytochrome b5-like [Momordica charantia]7.2e-4791.43Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHS+SARE M+KYYVGEIDISTIPE+ TY+  KQPHYNQDKTTEFI+KLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        YTKST
Subjt:  YTKST

XP_023006481.1 cytochrome b5-like [Cucurbita maxima]3.2e-4792.38Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARE M+KYYVGEIDISTIPE+ TYT  KQPHYNQDKTTEFI+KLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y+KST
Subjt:  YTKST

XP_038906915.1 cytochrome b5-like [Benincasa hispida]3.8e-4895.24Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKY VGEIDISTIPE++TYTT KQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y+KST
Subjt:  YTKST

TrEMBL top hitse value%identityAlignment
A0A0A0LHS9 Cytochrome b5 heme-binding domain-containing protein7.0e-4893.33Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARE MSKYYVGEIDIST+PE+ TYT PKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y KS+
Subjt:  YTKST

A0A1S3C5R9 cytochrome b5-like3.7e-4995.24Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYY+GEIDISTIPEQ TYT PKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y KS+
Subjt:  YTKST

A0A5D3CSF5 Cytochrome b5-like3.7e-4995.24Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYY+GEIDISTIPEQ TYT PKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y KS+
Subjt:  YTKST

A0A6J1CAX1 cytochrome b5-like3.5e-4791.43Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHS+SARE M+KYYVGEIDISTIPE+ TY+  KQPHYNQDKTTEFI+KLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        YTKST
Subjt:  YTKST

A0A6J1KXV9 cytochrome b5-like1.6e-4792.38Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARE M+KYYVGEIDISTIPE+ TYT  KQPHYNQDKTTEFI+KLLQFLVPLAILGLAVGIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        Y+KST
Subjt:  YTKST

SwissProt top hitse value%identityAlignment
O04354 Cytochrome b58.8e-4074.29Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VY+VT+FLEDHPGGD+VLLS TGKDATDDFED+GHS SA+ M+ +YYVG+ID S+IP Q  YT PKQP YN DKT EF+IKLLQFLVPL IL  A+GIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        YTKS+
Subjt:  YTKST

O48845 Cytochrome b5 isoform B3.7e-4686.54Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVT+FLEDHPGGD+VLLS TGKDATDDFEDVGHSESAREMM +YYVGEID +TIP++  YT PKQPHYNQDKT+EFIIKLLQFLVPLAILGLAVGIR 
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKS
        YTKS
Subjt:  YTKS

P49098 Cytochrome b54.2e-4276.19Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VY+VT+FL+DHPGGDEVLLS TGKDATDDFEDVGHS SAR M+ +YYVG+ID +TIP +T YT P QPHYNQDKT+EF++KLLQFLVPL ILG+A GIRF
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        YTK +
Subjt:  YTKST

P49099 Cytochrome b5, seed isoform2.5e-4277.14Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVT+FLEDHPGG EVLLS TGKDATDDFED+GHS SAR M+ +YYVG+ID STIP +  YT PKQPHYNQDKTTEFI+KLLQFLVPL ILG+A G+ F
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKST
        YTK +
Subjt:  YTKST

P49100 Cytochrome b58.5e-4380.77Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNV++FLEDHPGGD+VLLS TGKDATDDFEDVGHS +AR MM +YYVG+ID STIP +T Y  PKQPHYNQDKT EFIIK+LQFLVPLAILGLAV IR 
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKS
        YTKS
Subjt:  YTKS

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A6.1e-2043.69Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQ-----FLVPLAILGLA
        VY+V+ ++++HPGGD+VLL+  GKDATDDFED GHS+ ARE+M KY++GE+D S++PE      P+   Y +D+  + + KL       ++VP++I+ ++
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQ-----FLVPLAILGLA

Query:  VGI
        V +
Subjt:  VGI

AT2G32720.1 cytochrome B5 isoform B2.6e-4786.54Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VYNVT+FLEDHPGGD+VLLS TGKDATDDFEDVGHSESAREMM +YYVGEID +TIP++  YT PKQPHYNQDKT+EFIIKLLQFLVPLAILGLAVGIR 
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTKS
        YTKS
Subjt:  YTKS

AT2G46650.1 cytochrome B5 isoform C3.8e-2249.51Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTT--EFIIKLLQFLVPLAILGLAVGI
        VY+++ F+++HPGGD VLL+ TGKDA+ DFEDV HS+ A+E+M KY +G++D ST+P    Y  P +      +TT  E   KLL +L+PL ILG+A  +
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTT--EFIIKLLQFLVPLAILGLAVGI

Query:  RFY
        RFY
Subjt:  RFY

AT5G48810.1 cytochrome B5 isoform D1.3e-3362.26Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPH--YNQDKTTEFIIKLLQFLVPLAILGLAVGI
        VY+VT+FL+DHPGGDEV+L+ TGKDATDDFEDVGHS +A+ M+ +YYVG+ID +T+P +  +  P        QDK+++F+IKLLQFLVPL ILGLA GI
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPH--YNQDKTTEFIIKLLQFLVPLAILGLAVGI

Query:  RFYTKS
        R+YTK+
Subjt:  RFYTKS

AT5G53560.1 cytochrome B5 isoform E4.5e-3970.87Show/hide
Query:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF
        VY+VT F++DHPGGDEVLLS TGKDAT+DFEDVGHS++AR+MM KY++GEID S++P   TY  P+QP YNQDKT EFIIK+LQFLVP+ ILGLA+ +R 
Subjt:  VYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRF

Query:  YTK
        YTK
Subjt:  YTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGTAATAGAAAATCGAACCATTTTGATGTTCTCACTAGTTGTACTATGGTTGGTCGTTCAGCCCAGAATGCGATCGACAAGCGTTCAGTTGTTTTGGCA
GTTTACAATGTAACCGAGTTCTTGGAAGACCATCCTGGTGGCGACGAGGTGTTGTTGTCCGGCACTGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCAT
AGTGAAAGTGCAAGAGAAATGATGAGCAAATACTACGTTGGAGAGATCGACATCTCGACGATCCCAGAACAGACGACATACACAACTCCAAAGCAGCCTCATTAC
AATCAGGATAAGACGACCGAGTTCATAATCAAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGTTTGGCAGTCGGTATCCGCTTTTACACCAAATCAACC
TGA
mRNA sequenceShow/hide mRNA sequence
ATCCAAGTGTCGGCTGTTTCCTGTTTGGACACAAACCAAGAAATCACTGCTGACCAATGACTCACCCACCACCACAATTCAAATTCAATTCAATTCAATGCTTCT
TCCCTTTCTCCCACATTCATGCATTTACTCGCCTCCCATCTTTATTTCTGCACCGCCCTCACTGGTTGCTGCACTCCCCTTTTTCTTCACCTTCCCTGCCCCTCA
CCCTTGTTTCCCTCATTTCTCCGCCGTCTCCGGGCAGATTGCCAAATGGGTGGCGACGGAAAGCTCTTTACTTTGGCTGAAGTCTCTCAGCACAATAACCGCAAA
GACTGTTGGTTGATCATCAATGCCAAGTAATAGAAAATCGAACCATTTTGATGTTCTCACTAGTTGTACTATGGTTGGTCGTTCAGCCCAGAATGCGATCGACAA
GCGTTCAGTTGTTTTGGCAGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCTGGTGGCGACGAGGTGTTGTTGTCCGGCACTGGTAAGGATGCAACTGATGA
TTTTGAAGATGTGGGTCATAGTGAAAGTGCAAGAGAAATGATGAGCAAATACTACGTTGGAGAGATCGACATCTCGACGATCCCAGAACAGACGACATACACAAC
TCCAAAGCAGCCTCATTACAATCAGGATAAGACGACCGAGTTCATAATCAAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGTTTGGCAGTCGGTATCCG
CTTTTACACCAAATCAACCTGAGGTTCTTGTTGAGATCATATTAGGTGGTTTAGTCTTAATGATCAATTACCAACTGCTGCATTGTGTTTGTGAAACTTAGAAAT
TTTCTATTCTGATGCTCTACTTTTTTCCCCCCTTTTTCTTTGTCTTTTACATTCTAGTTTTGTTTATTTGACTGGTAAAGTAAATGTTATTTTAGTTAAAGAAAA
GAGTTGTTTGTAATCATGGAGTTGGTGATTTTCATCAGTATTTTACTAAGAAAATCTATATCTTTTTGTCTAATAATAATTTAAAATATACCT
Protein sequenceShow/hide protein sequence
MPSNRKSNHFDVLTSCTMVGRSAQNAIDKRSVVLAVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHY
NQDKTTEFIIKLLQFLVPLAILGLAVGIRFYTKST