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Lsi09G011540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G011540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCLAVATA3/ESR-related protein
Genome locationchr09:18517262..18517617
RNA-Seq ExpressionLsi09G011540
SyntenyLsi09G011540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574868.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1054.46Show/hide
Query:  MAKLEDYYL--------KSQAYFFLFFLVLLLLVVPHRFSTVPST------PSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSN
        MAK ED Y         KSQA FFLF LVLLLL VP+RFST PS+      PSR PS S AMA            ++     QFEA+MHEVPSGPNPTSN
Subjt:  MAKLEDYYL--------KSQAYFFLFFLVLLLLVVPHRFSTVPST------PSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSN

Query:  K
        K
Subjt:  K

KAG6593788.1 hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1254.55Show/hide
Query:  MAKLEDYYL-------KSQAYFFLFFLVLLLLVVPHRFSTVP-----STPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK
        MA+L+++Y        KS+A FFLF     LL++P+ FST+P     STPSR PS+S+AM ++    SS YSS+R   LQQFEAAMHEVPSGPNPT+NK
Subjt:  MAKLEDYYL-------KSQAYFFLFFLVLLLLVVPHRFSTVP-----STPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK

KGN61461.1 hypothetical protein Csa_006135 [Cucumis sativus]1.5e-1564.37Show/hide
Query:  MAKLEDYYLKSQAYFFLFFLVLLLLVVPHRFSTVPSTPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK
        MAK  + YLKSQA FFLF LVLLLLVVPHR STVP+TPSR PSN MAM                     FEAAMHEVPSGPNPTSNK
Subjt:  MAKLEDYYLKSQAYFFLFFLVLLLLVVPHRFSTVPSTPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK

TrEMBL top hitse value%identityAlignment
A0A0A0LNB8 CLAVATA3/ESR-related protein7.5e-1664.37Show/hide
Query:  MAKLEDYYLKSQAYFFLFFLVLLLLVVPHRFSTVPSTPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK
        MAK  + YLKSQA FFLF LVLLLLVVPHR STVP+TPSR PSN MAM                     FEAAMHEVPSGPNPTSNK
Subjt:  MAKLEDYYLKSQAYFFLFFLVLLLLVVPHRFSTVPSTPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTCTTCCGGGGGGTGTCACCGTTGCCGATCGTCATCGTCATTCGTCCCTGTCGTCTTTCCACTCCCTTTTCATGGCAAAACTTGAAGATTATTATTTGAAGTC
TCAAGCTTATTTCTTCCTCTTCTTCCTCGTTCTTCTCCTCCTCGTTGTTCCTCATCGCTTCTCGACCGTTCCGAGTACTCCGTCTCGTGCTCCTTCAAATTCTATGGCCA
TGGCAAAACGACCCTTATTCATCTCTAGCCATTATTCTAGTAAAAGAATATTATTATTGCAACAGTTTGAAGCAGCTATGCATGAAGTTCCTAGTGGCCCAAATCCCACA
TCCAACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATTCTTCCGGGGGGTGTCACCGTTGCCGATCGTCATCGTCATTCGTCCCTGTCGTCTTTCCACTCCCTTTTCATGGCAAAACTTGAAGATTATTATTTGAAGTC
TCAAGCTTATTTCTTCCTCTTCTTCCTCGTTCTTCTCCTCCTCGTTGTTCCTCATCGCTTCTCGACCGTTCCGAGTACTCCGTCTCGTGCTCCTTCAAATTCTATGGCCA
TGGCAAAACGACCCTTATTCATCTCTAGCCATTATTCTAGTAAAAGAATATTATTATTGCAACAGTTTGAAGCAGCTATGCATGAAGTTCCTAGTGGCCCAAATCCCACA
TCCAACAAGTAA
Protein sequenceShow/hide protein sequence
MDILPGGVTVADRHRHSSLSSFHSLFMAKLEDYYLKSQAYFFLFFLVLLLLVVPHRFSTVPSTPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPT
SNK