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Lsi09G011630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G011630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich protein 5-like
Genome locationchr09:18744673..18750390
RNA-Seq ExpressionLsi09G011630
SyntenyLsi09G011630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460740.1 PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo]7.5e-3273.33Show/hide
Query:  MAKIFIVVVAFVFLVVNAG------GGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG
        MAK  +V+VAFVF ++N        G SR+ EYQTLE+AA+PVA PP  GGV DQKNIFGGVGGF GMGGYIGGL+PHLGGVG IGKYGGIGGG GFGHG
Subjt:  MAKIFIVVVAFVFLVVNAG------GGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFG---GGVGGVGGGFVPFP
        GFG   GGVGGVGGG VPFP
Subjt:  GFG---GGVGGVGGGFVPFP

XP_031736585.1 elastin-like isoform X1 [Cucumis sativus]5.8e-3274.11Show/hide
Query:  MAKIFIVVVAFVFLVVN--------AGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH
        MAK F++++ FVFL++N        AGG  +E+Y+TLE+AAAPVA PPS GGV DQKNIFGGVG FAGMGGYIGGL+PHLGGVGVIGKYGGIGGG G GH
Subjt:  MAKIFIVVVAFVFLVVN--------AGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGG
        GGFGGGVGGVGG
Subjt:  GGFGGGVGGVGG

XP_031736586.1 ctenidin-3-like isoform X2 [Cucumis sativus]4.4e-3274.77Show/hide
Query:  MAKIFIVVVAFVFLVVN-------AGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG
        MAK F++++ FVFL++N       AGG  +E+Y+TLE+AAAPVA PPS GGV DQKNIFGGVG FAGMGGYIGGL+PHLGGVGVIGKYGGIGGG G GHG
Subjt:  MAKIFIVVVAFVFLVVN-------AGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFGGGVGGVGG
        GFGGGVGGVGG
Subjt:  GFGGGVGGVGG

XP_031736587.1 glycine-rich protein 5-like isoform X3 [Cucumis sativus]1.4e-3372.73Show/hide
Query:  MAKIFIVVVAFVFLVVN--------AGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH
        MAK F++++ FVFL++N        AGG  +E+Y+TLE+AAAPVA PPS GGV DQKNIFGGVG FAGMGGYIGGL+PHLGGVGVIGKYGGIGGG G GH
Subjt:  MAKIFIVVVAFVFLVVN--------AGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGV---GGGFVPFP
        GGFGGGVGGV   GGG VPFP
Subjt:  GGFGGGVGGV---GGGFVPFP

XP_038906734.1 glycine-rich protein 5-like [Benincasa hispida]1.5e-4086.55Show/hide
Query:  MAKIFIVVVAFVFLVVNAG------GGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHGG
        MAKIFIVVVAFVFL VNAG      GGS+E+YQTLEQAAAPVA PPSS GV DQKNIFGGVGGFAGMGGYIGGL+PHLGGVGVIGKYGGIGGGIGFGHGG
Subjt:  MAKIFIVVVAFVFLVVNAG------GGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHGG

Query:  FG---GGVGGVGGGFVPFP
        FG   GGVGGVGGGFVPFP
Subjt:  FG---GGVGGVGGGFVPFP

TrEMBL top hitse value%identityAlignment
A0A1S3CEA9 glycine-rich cell wall structural protein 1-like3.7e-3273.33Show/hide
Query:  MAKIFIVVVAFVFLVVNAG------GGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG
        MAK  +V+VAFVF ++N        G SR+ EYQTLE+AA+PVA PP  GGV DQKNIFGGVGGF GMGGYIGGL+PHLGGVG IGKYGGIGGG GFGHG
Subjt:  MAKIFIVVVAFVFLVVNAG------GGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFG---GGVGGVGGGFVPFP
        GFG   GGVGGVGGG VPFP
Subjt:  GFG---GGVGGVGGGFVPFP

A0A5D3D259 Glycine-rich cell wall structural protein 1-like3.7e-3273.33Show/hide
Query:  MAKIFIVVVAFVFLVVNAG------GGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG
        MAK  +V+VAFVF ++N        G SR+ EYQTLE+AA+PVA PP  GGV DQKNIFGGVGGF GMGGYIGGL+PHLGGVG IGKYGGIGGG GFGHG
Subjt:  MAKIFIVVVAFVFLVVNAG------GGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFG---GGVGGVGGGFVPFP
        GFG   GGVGGVGGG VPFP
Subjt:  GFG---GGVGGVGGGFVPFP

A0A6J1CDU6 WW domain-containing protein C660.067.2e-2059.23Show/hide
Query:  IFIVVVAFVFLVVNAGG-------GSREEYQTLEQAAAPVAYPPSSGGVVDQKN-IFGGVGGFAGMGGYIGGLYPHL--GGVGVIGKYGGIG--------
        +F+V+ AFV LVV+A G        S ++ QTLE A  PVA PPSSGGV +QK  IFGGVGGFAGMGG++GGL+PHL  GGVG IGK+GGIG        
Subjt:  IFIVVVAFVFLVVNAGG-------GSREEYQTLEQAAAPVAYPPSSGGVVDQKN-IFGGVGGFAGMGGYIGGLYPHL--GGVGVIGKYGGIG--------

Query:  -----GGIGFGHGGFGGGVGGVGGGFVPFP
             GG+G G GG GGGVGGVGGG +PFP
Subjt:  -----GGIGFGHGGFGGGVGGVGGGFVPFP

A0A6J1HL05 glycine-rich protein 5-like9.3e-2872.73Show/hide
Query:  MAKI--FIVVVAFVFLVVNA------GGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH
        MAKI   +VVV FV LVV+A      GGGS +    L+ A APVA  PSS   VDQKNI+GGVGGFAGMGGYIGGL+PHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MAKI--FIVVVAFVFLVVNA------GGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFG---GGVGGVGGGFVPFP
        GGFG   GGVGGVGGG VPFP
Subjt:  GGFG---GGVGGVGGGFVPFP

A0A6J1KIQ3 glycine-rich protein 5-like1.6e-2772.41Show/hide
Query:  IFIVVVAFVFLVVNA------GGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHGGFG-
        + +VVV FV LVV+A      GGGS +    L+ A APVA  PSS   VDQKNI+GGVGGFAGMGGYIGGL+PHLGGVGVIGKYGGIGGGIGFGHGGFG 
Subjt:  IFIVVVAFVFLVVNA------GGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHGGFG-

Query:  --GGVGGVGGGFVPFP
          GGVGGVGGG VPFP
Subjt:  --GGVGGVGGGFVPFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein1.1e-0453.41Show/hide
Query:  AAAPVAYPPSSGGVVDQKNIFG--GVGGFAGMGGY--IGGL-YPHLGGVGVIGKYGGIGGGIGFGH----------GGFGGGVGGVGG
        A A    PP S G  D+K I G  GVGGFAG+GG   +GGL  P +GG+G IGKYGGIGG  G G           GG GGGVGG+GG
Subjt:  AAAPVAYPPSSGGVVDQKNIFG--GVGGFAGMGGY--IGGL-YPHLGGVGVIGKYGGIGGGIGFGH----------GGFGGGVGGVGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACTTCAACAAGTTTAAAGAGTTGAGAGCGAGGGAAATGGCGAAAATTTTCATCGTTGTCGTTGCGTTTGTTTTCCTAGTCGTGAATGCGGGCGGTGGCAGTAG
GGAAGAGTACCAAACCCTAGAACAAGCAGCGGCACCCGTGGCATATCCGCCGAGCAGCGGCGGTGTCGTCGACCAAAAGAACATCTTTGGTGGGGTTGGAGGTTTTGCAG
GGATGGGTGGCTACATTGGAGGGTTGTATCCACATCTTGGTGGGGTTGGCGTAATCGGCAAGTACGGCGGAATTGGTGGTGGCATTGGCTTCGGTCACGGTGGCTTCGGA
GGCGGAGTTGGCGGCGTCGGTGGCGGATTTGTGCCATTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGACTTCAACAAGTTTAAAGAGTTGAGAGCGAGGGAAATGGCGAAAATTTTCATCGTTGTCGTTGCGTTTGTTTTCCTAGTCGTGAATGCGGGCGGTGGCAGTAG
GGAAGAGTACCAAACCCTAGAACAAGCAGCGGCACCCGTGGCATATCCGCCGAGCAGCGGCGGTGTCGTCGACCAAAAGAACATCTTTGGTGGGGTTGGAGGTTTTGCAG
GGATGGGTGGCTACATTGGAGGGTTGTATCCACATCTTGGTGGGGTTGGCGTAATCGGCAAGTACGGCGGAATTGGTGGTGGCATTGGCTTCGGTCACGGTGGCTTCGGA
GGCGGAGTTGGCGGCGTCGGTGGCGGATTTGTGCCATTTCCTTGA
Protein sequenceShow/hide protein sequence
MNDFNKFKELRAREMAKIFIVVVAFVFLVVNAGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHGGFG
GGVGGVGGGFVPFP