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Lsi09G011640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G011640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr09:18810310..18811372
RNA-Seq ExpressionLsi09G011640
SyntenyLsi09G011640
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902587.1 PREDICTED: uncharacterized protein LOC103499490 [Cucumis melo]2.4e-6391.27Show/hide
Query:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI
        AFSF +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR+SFDAFKVPRDFYRCG 
Subjt:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI

Query:  FKKCSWLVTEDGFYFSPDEFWCKEGF
        FKKCSWLVTEDGFYFSPDE   K+ F
Subjt:  FKKCSWLVTEDGFYFSPDEFWCKEGF

XP_023000578.1 S-protein homolog 5 [Cucurbita maxima]3.9e-6188.89Show/hide
Query:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI
        AFSFFIFIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR+SFDAFKVPRDFYRCGI
Subjt:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI

Query:  FKKCSWLVTEDGFYFSPDEFWCKEGF
        FKKCSWLV EDGFYFSPDE   K+ F
Subjt:  FKKCSWLVTEDGFYFSPDEFWCKEGF

XP_038875011.1 S-protein homolog 5-like [Benincasa hispida]2.3e-6190.48Show/hide
Query:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI
        AFSFF+FIIQPDRLYL+GVVFEVRVINGFKNNSSLPLVIWCSS+ESDLGGRALQEHDDFSWKVTTKLWK  +FSCTMKWDAKRRSFDAFKVPRDFYRCG 
Subjt:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI

Query:  FKKCSWLVTEDGFYFSPDEFWCKEGF
        FKKCSWLVTEDGFYFSPDE   K+ F
Subjt:  FKKCSWLVTEDGFYFSPDEFWCKEGF

XP_038875976.1 S-protein homolog 5-like isoform X1 [Benincasa hispida]1.0e-6190.48Show/hide
Query:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI
        +FSFF+FII PDR YLH VVFEVRVINGF+NNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCG 
Subjt:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI

Query:  FKKCSWLVTEDGFYFSPDEFWCKEGF
        FKKCSWLVTEDGFYFSPDE   K+ F
Subjt:  FKKCSWLVTEDGFYFSPDEFWCKEGF

XP_038875977.1 S-protein homolog 5-like isoform X2 [Benincasa hispida]1.0e-6190.48Show/hide
Query:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI
        +FSFF+FII PDR YLH VVFEVRVINGF+NNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCG 
Subjt:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI

Query:  FKKCSWLVTEDGFYFSPDEFWCKEGF
        FKKCSWLVTEDGFYFSPDE   K+ F
Subjt:  FKKCSWLVTEDGFYFSPDEFWCKEGF

TrEMBL top hitse value%identityAlignment
A0A0A0LNI8 S-protein homolog1.2e-6092.56Show/hide
Query:  IFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGIFKKCS
        +FIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCG FKKCS
Subjt:  IFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGIFKKCS

Query:  WLVTEDGFYFSPDEFWCKEGF
        WLVTEDGFYFS DE   K+ F
Subjt:  WLVTEDGFYFSPDEFWCKEGF

A0A1S4E2Y6 S-protein homolog1.2e-6391.27Show/hide
Query:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI
        AFSF +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR+SFDAFKVPRDFYRCG 
Subjt:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI

Query:  FKKCSWLVTEDGFYFSPDEFWCKEGF
        FKKCSWLVTEDGFYFSPDE   K+ F
Subjt:  FKKCSWLVTEDGFYFSPDEFWCKEGF

A0A5D3CZS1 S-protein homolog1.2e-6391.27Show/hide
Query:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI
        AFSF +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR+SFDAFKVPRDFYRCG 
Subjt:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI

Query:  FKKCSWLVTEDGFYFSPDEFWCKEGF
        FKKCSWLVTEDGFYFSPDE   K+ F
Subjt:  FKKCSWLVTEDGFYFSPDEFWCKEGF

A0A6J1HNC1 S-protein homolog1.9e-6188.89Show/hide
Query:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI
        AFSFFIFIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR+SFDAFKVPRDFYRCGI
Subjt:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI

Query:  FKKCSWLVTEDGFYFSPDEFWCKEGF
        FKKCSWLV EDGFYFSPDE   K+ F
Subjt:  FKKCSWLVTEDGFYFSPDEFWCKEGF

A0A6J1KN10 S-protein homolog1.9e-6188.89Show/hide
Query:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI
        AFSFFIFIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR+SFDAFKVPRDFYRCGI
Subjt:  AFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGI

Query:  FKKCSWLVTEDGFYFSPDEFWCKEGF
        FKKCSWLV EDGFYFSPDE   K+ F
Subjt:  FKKCSWLVTEDGFYFSPDEFWCKEGF

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.6e-0428.92Show/hide
Query:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGIFKKCSWLVTEDG
        + L L+  C SK+ DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  RD     +C    +C W +  +G
Subjt:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGIFKKCSWLVTEDG

Arabidopsis top hitse value%identityAlignment
AT1G26798.1 Plant self-incompatibility protein S1 family9.6e-1032.91Show/hide
Query:  LVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRD---FYRCGIFKKCSWLVTEDG
        LV+ C +K  DLG  AL+  +   ++    L ++  ++CT  W    ++FD F+V RD      CGI ++C W + E G
Subjt:  LVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRD---FYRCGIFKKCSWLVTEDG

AT3G24060.1 Plant self-incompatibility protein S1 family2.2e-3859.84Show/hide
Query:  FIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWK-SNQFSCTMKWDAKRRSFDAFKVPRDFYRCGIFKK
        F  ++QP  ++L G  F+VRVIN F++NSSLPLVIWC+S + DLGGRALQE DDF W     LW    +++CTMKWD+KR+ F+AFKV RD  RCG  KK
Subjt:  FIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWK-SNQFSCTMKWDAKRRSFDAFKVPRDFYRCGIFKK

Query:  CSWLVTEDGFYFSPDE-FWCKE
        CSW V EDGFYFS DE +W K+
Subjt:  CSWLVTEDGFYFSPDE-FWCKE

AT4G16195.1 Plant self-incompatibility protein S1 family1.1e-0528.92Show/hide
Query:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGIFKKCSWLVTEDG
        + L L+  C SK+ DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  RD     +C    +C W +  +G
Subjt:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGIFKKCSWLVTEDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTCTCCTTCTTCATATTCATCATACAGCCAGATAGATTATACCTACACGGCGTTGTTTTCGAGGTTCGAGTCATCAATGGCTTCAAAAACAACTCATCTTTGCC
TTTGGTAATATGGTGCTCTTCAAAAGAGAGTGATTTGGGAGGGAGGGCGTTGCAAGAGCATGATGATTTCAGCTGGAAAGTGACAACAAAACTTTGGAAGAGCAACCAAT
TCTCTTGTACCATGAAATGGGATGCCAAAAGGAGGTCCTTTGATGCGTTTAAGGTTCCTAGGGACTTTTACCGATGTGGGATTTTCAAGAAGTGTTCTTGGTTGGTTACT
GAAGATGGCTTCTATTTTAGCCCTGATGAGTTTTGGTGCAAGGAAGGTTTCTTTCTTTCTAATCTTCCAAATGAAATGAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATTCTCCTTCTTCATATTCATCATACAGCCAGATAGATTATACCTACACGGCGTTGTTTTCGAGGTTCGAGTCATCAATGGCTTCAAAAACAACTCATCTTTGCC
TTTGGTAATATGGTGCTCTTCAAAAGAGAGTGATTTGGGAGGGAGGGCGTTGCAAGAGCATGATGATTTCAGCTGGAAAGTGACAACAAAACTTTGGAAGAGCAACCAAT
TCTCTTGTACCATGAAATGGGATGCCAAAAGGAGGTCCTTTGATGCGTTTAAGGTTCCTAGGGACTTTTACCGATGTGGGATTTTCAAGAAGTGTTCTTGGTTGGTTACT
GAAGATGGCTTCTATTTTAGCCCTGATGAGTTTTGGTGCAAGGAAGGTTTCTTTCTTTCTAATCTTCCAAATGAAATGAAAAGATGA
Protein sequenceShow/hide protein sequence
MAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGIFKKCSWLVT
EDGFYFSPDEFWCKEGFFLSNLPNEMKR