; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G011650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G011650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr09:18842954..18866754
RNA-Seq ExpressionLsi09G011650
SyntenyLsi09G011650
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]2.7e-5380.87Show/hide
Query:  GKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLC
        GKPFQSPPVTVNITN LK  NNQLT+HCKSGDDDLG HQLSHL SYAF FRPNFWG+TLFYC F W G  HYF+IY+DLRDR +CNDTLCLWIVGE+GLC
Subjt:  GKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLC

Query:  LFNYNTNAYDICYMW
        +F+Y TNAYDICY W
Subjt:  LFNYNTNAYDICYMW

XP_008460739.1 PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]6.1e-4573.83Show/hide
Query:  VTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNA
        +TVNITN + G NNQLTVHCKSGDDDLG H+L HL SY FTFRPNFWG+TLFYC FQW  WLHYFDIYKD RD  RCN TLCLWI+ E+G+C+FNY+T  
Subjt:  VTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNA

Query:  YDICYMW
        YD CY W
Subjt:  YDICYMW

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]7.1e-4674.58Show/hide
Query:  GKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLC
        GKPFQ+P VTVNITN L    +QLTVHCKSGDDDLG HQL  LG YAFTFRPNF GTTLFYCTFQWPGW H FDIYKD RDR RCN  LCLWIVGE+G+C
Subjt:  GKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLC

Query:  LFNYNTNAYDICYMWLPK
        +F+Y T  YD CY W+ K
Subjt:  LFNYNTNAYDICYMWLPK

XP_022975116.1 S-protein homolog 3-like, partial [Cucurbita maxima]3.8e-3975Show/hide
Query:  NGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGL
        +G  F+ PP+TVNITNVL+  +NQLTVHCKSGDDDLG HQL +LG YAFTFRPNFWGTT FYCTFQWPG+  YFDIYKD RDR +CN TLCLWIVG++G+
Subjt:  NGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGL

XP_022975612.1 S-protein homolog 3-like, partial [Cucurbita maxima]3.2e-3876.04Show/hide
Query:  FQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGL
        F+ PP+TVNITNVL+  +NQLTVHCKSGDDDLG HQL +LG YAFTFRPNFWG+T FYCTFQWPG+  YFDIYKD RDR +CN TLCLWIVG++G+
Subjt:  FQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGL

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog1.3e-5380.87Show/hide
Query:  GKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLC
        GKPFQSPPVTVNITN LK  NNQLT+HCKSGDDDLG HQLSHL SYAF FRPNFWG+TLFYC F W G  HYF+IY+DLRDR +CNDTLCLWIVGE+GLC
Subjt:  GKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLC

Query:  LFNYNTNAYDICYMW
        +F+Y TNAYDICY W
Subjt:  LFNYNTNAYDICYMW

A0A1S3CDK4 S-protein homolog2.9e-4573.83Show/hide
Query:  VTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNA
        +TVNITN + G NNQLTVHCKSGDDDLG H+L HL SY FTFRPNFWG+TLFYC FQW  WLHYFDIYKD RD  RCN TLCLWI+ E+G+C+FNY+T  
Subjt:  VTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNA

Query:  YDICYMW
        YD CY W
Subjt:  YDICYMW

A0A1S3CP53 S-protein homolog3.5e-4674.58Show/hide
Query:  GKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLC
        GKPFQ+P VTVNITN L    +QLTVHCKSGDDDLG HQL  LG YAFTFRPNF GTTLFYCTFQWPGW H FDIYKD RDR RCN  LCLWIVGE+G+C
Subjt:  GKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLC

Query:  LFNYNTNAYDICYMWLPK
        +F+Y T  YD CY W+ K
Subjt:  LFNYNTNAYDICYMWLPK

A0A6J1IDA7 S-protein homolog1.8e-3975Show/hide
Query:  NGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGL
        +G  F+ PP+TVNITNVL+  +NQLTVHCKSGDDDLG HQL +LG YAFTFRPNFWGTT FYCTFQWPG+  YFDIYKD RDR +CN TLCLWIVG++G+
Subjt:  NGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGL

A0A6J1IDI1 S-protein homolog1.6e-3876.04Show/hide
Query:  FQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGL
        F+ PP+TVNITNVL+  +NQLTVHCKSGDDDLG HQL +LG YAFTFRPNFWG+T FYCTFQWPG+  YFDIYKD RDR +CN TLCLWIVG++G+
Subjt:  FQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGL

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 24.8e-2142.4Show/hide
Query:  DSLGNGKPFQSPPVTVNITNVLKGQNNQLTV--HCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDR---KRCNDTLC
        D       F +   TV I N L    NQLT+  HCKS DDDLG   L    S++F+F   F+G TL++C+F WP   H FDIYKD RD     +C    C
Subjt:  DSLGNGKPFQSPPVTVNITNVLKGQNNQLTV--HCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDR---KRCNDTLC

Query:  LWIVGEEGLCLFNYNTNAYDICYMW
        +W +   G C FN  T  +D+CY W
Subjt:  LWIVGEEGLCLFNYNTNAYDICYMW

F4JZG1 S-protein homolog 45.9e-1946.3Show/hide
Query:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFW-GTTLFYCTFQWPGWLHYFDIYKDLRDRKRCN--DTLCLWIVGEEGLCLFNYNTN
        V ITN L G  + L +HCKS DDDLG   L+  GS++F FRP+   G TLF+C F WPG   +F+IY D RD  R       C+W +G+ G C F+   +
Subjt:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFW-GTTLFYCTFQWPGWLHYFDIYKDLRDRKRCN--DTLCLWIVGEEGLCLFNYNTN

Query:  AYDICYMW
        A++ICY W
Subjt:  AYDICYMW

O23020 S-protein homolog 52.8e-1639.32Show/hide
Query:  GNGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEG
        G   PF    V V +TN++ G    LT+HCKS  DDLG H +     Y F F+PN W +TLF+C+FQW      FDIY   RD+  C+D  C W +  +G
Subjt:  GNGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEG

Query:  LCLFNYNTNAYDICYMW
         C           C+ W
Subjt:  LCLFNYNTNAYDICYMW

P0DN93 S-protein homolog 295.2e-1538.05Show/hide
Query:  PFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLF
        PF    VTV  TN +  Q   LT+ C+S DDDLG H L H  ++ + FRP+++ TTLF C F W   + +FD Y+  RD+  C    C W +  +  C+ 
Subjt:  PFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLF

Query:  NYNTNAYDICYMW
              +D CY W
Subjt:  NYNTNAYDICYMW

Q9FMQ4 S-protein homolog 38.3e-2147.66Show/hide
Query:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRD--RKRCNDTLCLWIVGEEGLCLFNYNTNA
        V ITN L G    L +HCKS DDDLG   L+  GS++F FR +  GTTLFYC F WPG    FDIY D RD  R   +   C+W +  +G C+F+ + +A
Subjt:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRD--RKRCNDTLCLWIVGEEGLCLFNYNTNA

Query:  YDICYMW
        ++ICY W
Subjt:  YDICYMW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family2.0e-1739.32Show/hide
Query:  GNGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEG
        G   PF    V V +TN++ G    LT+HCKS  DDLG H +     Y F F+PN W +TLF+C+FQW      FDIY   RD+  C+D  C W +  +G
Subjt:  GNGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEG

Query:  LCLFNYNTNAYDICYMW
         C           C+ W
Subjt:  LCLFNYNTNAYDICYMW

AT3G16970.1 Plant self-incompatibility protein S1 family1.1e-2042.98Show/hide
Query:  FQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRK--RCNDTLCLWIVGEEGLCL
        F +P  TV I N L G +  L  HCKS +DDLG   ++  G+++F FRP+ +G TLF+C F W   LH+FDIYK  RDR+        C W + ++G C 
Subjt:  FQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRK--RCNDTLCLWIVGEEGLCL

Query:  FNYNTNAYDICYMW
         N N+N +D+C  W
Subjt:  FNYNTNAYDICYMW

AT4G16195.1 Plant self-incompatibility protein S1 family3.4e-2242.4Show/hide
Query:  DSLGNGKPFQSPPVTVNITNVLKGQNNQLTV--HCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDR---KRCNDTLC
        D       F +   TV I N L    NQLT+  HCKS DDDLG   L    S++F+F   F+G TL++C+F WP   H FDIYKD RD     +C    C
Subjt:  DSLGNGKPFQSPPVTVNITNVLKGQNNQLTV--HCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDR---KRCNDTLC

Query:  LWIVGEEGLCLFNYNTNAYDICYMW
        +W +   G C FN  T  +D+CY W
Subjt:  LWIVGEEGLCLFNYNTNAYDICYMW

AT5G12060.1 Plant self-incompatibility protein S1 family5.9e-2247.66Show/hide
Query:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRD--RKRCNDTLCLWIVGEEGLCLFNYNTNA
        V ITN L G    L +HCKS DDDLG   L+  GS++F FR +  GTTLFYC F WPG    FDIY D RD  R   +   C+W +  +G C+F+ + +A
Subjt:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRD--RKRCNDTLCLWIVGEEGLCLFNYNTNA

Query:  YDICYMW
        ++ICY W
Subjt:  YDICYMW

AT5G12070.1 Plant self-incompatibility protein S1 family4.2e-2046.3Show/hide
Query:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFW-GTTLFYCTFQWPGWLHYFDIYKDLRDRKRCN--DTLCLWIVGEEGLCLFNYNTN
        V ITN L G  + L +HCKS DDDLG   L+  GS++F FRP+   G TLF+C F WPG   +F+IY D RD  R       C+W +G+ G C F+   +
Subjt:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFW-GTTLFYCTFQWPGWLHYFDIYKDLRDRKRCN--DTLCLWIVGEEGLCLFNYNTN

Query:  AYDICYMW
        A++ICY W
Subjt:  AYDICYMW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACGCTCGTCACCGCCACCGCTACTGTCGTCAGATGCTACCGGAGTTACCTTCGTTCAGATCCTCTACCACTGCATGCAGGGGAAGTCGTCGGAGTGAAGGAGGA
AAAAAGGGGAAGTTGTTGGAGTGAAGGAGGAGAAGTTGTCGGAGTGAAGGAGGAAAAAAGGTGTGTCGGAAACCTTGTGCCCTATGCATTCAAGGGGAAATGGGAGGTCG
ATGTGTCATACCCTCTTTACGACGTGTCGACTTGGCCTTTTGTTGAGAAGAAATTTGATTCCCTTGGAAATGGAAAACCCTTCCAATCCCCACCAGTTACAGTCAACATA
ACAAATGTTCTAAAAGGTCAGAATAATCAACTCACTGTTCACTGCAAATCTGGCGATGATGACTTGGGATTCCACCAGCTCTCACATTTGGGCAGCTACGCCTTCACTTT
TCGACCAAACTTTTGGGGTACAACCTTGTTTTATTGTACATTCCAATGGCCTGGCTGGTTACATTACTTTGATATCTATAAGGATTTAAGAGATAGAAAACGTTGTAATG
ATACTCTGTGTTTGTGGATTGTGGGTGAAGAAGGTCTTTGTCTGTTCAACTATAACACCAATGCGTATGACATTTGTTATATGTGGTTGCCTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATACGCTCGTCACCGCCACCGCTACTGTCGTCAGATGCTACCGGAGTTACCTTCGTTCAGATCCTCTACCACTGCATGCAGGGGAAGTCGTCGGAGTGAAGGAGGA
AAAAAGGGGAAGTTGTTGGAGTGAAGGAGGAGAAGTTGTCGGAGTGAAGGAGGAAAAAAGGTGTGTCGGAAACCTTGTGCCCTATGCATTCAAGGGGAAATGGGAGGTCG
ATGTGTCATACCCTCTTTACGACGTGTCGACTTGGCCTTTTGTTGAGAAGAAATTTGATTCCCTTGGAAATGGAAAACCCTTCCAATCCCCACCAGTTACAGTCAACATA
ACAAATGTTCTAAAAGGTCAGAATAATCAACTCACTGTTCACTGCAAATCTGGCGATGATGACTTGGGATTCCACCAGCTCTCACATTTGGGCAGCTACGCCTTCACTTT
TCGACCAAACTTTTGGGGTACAACCTTGTTTTATTGTACATTCCAATGGCCTGGCTGGTTACATTACTTTGATATCTATAAGGATTTAAGAGATAGAAAACGTTGTAATG
ATACTCTGTGTTTGTGGATTGTGGGTGAAGAAGGTCTTTGTCTGTTCAACTATAACACCAATGCGTATGACATTTGTTATATGTGGTTGCCTAAATAA
Protein sequenceShow/hide protein sequence
MDTLVTATATVVRCYRSYLRSDPLPLHAGEVVGVKEEKRGSCWSEGGEVVGVKEEKRCVGNLVPYAFKGKWEVDVSYPLYDVSTWPFVEKKFDSLGNGKPFQSPPVTVNI
TNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNAYDICYMWLPK