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Lsi09G011670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G011670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase CYP23 isoform X1
Genome locationchr09:18866569..18888606
RNA-Seq ExpressionLsi09G011670
SyntenyLsi09G011670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032235.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]2.3e-0448.98Show/hide
Query:  REAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKN
        R  F EELGD Y +CG R CVVGDFNV+ SP+E    G+    ++   N
Subjt:  REAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKN

TYK22164.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]4.7e-0542.65Show/hide
Query:  EAKSSGFGGLIALQPRM--REAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKN
        E    GF   +   PR+  R  F EELGD Y +CG R CVVGDFNV+ SP+E    G+    ++   N
Subjt:  EAKSSGFGGLIALQPRM--REAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKN

TrEMBL top hitse value%identityAlignment
A0A0A0KQG1 Uncharacterized protein4.9e-0850.75Show/hide
Query:  RMREAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKNNV------VPPEIGTK
        R R  F EELGD + +CG+R CVVGDFNV+RSPEE  SRGR    ++   N +       PP IG K
Subjt:  RMREAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKNNV------VPPEIGTK

A0A5A7SSQ8 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X11.1e-0448.98Show/hide
Query:  REAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKN
        R  F EELGD Y +CG R CVVGDFNV+ SP+E    G+    ++   N
Subjt:  REAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKN

A0A5D3DEZ6 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X12.3e-0542.65Show/hide
Query:  EAKSSGFGGLIALQPRM--REAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKN
        E    GF   +   PR+  R  F EELGD Y +CG R CVVGDFNV+ SP+E    G+    ++   N
Subjt:  EAKSSGFGGLIALQPRM--REAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKN

M5VS59 Reverse transcriptase domain-containing protein (Fragment)2.5e-0439.68Show/hide
Query:  RMREAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLK-----LQKNNVVPPEI
        R R +F EEL D YGFCG + C+ GDFNV+R   E  + GR    ++     +Q+ N+  P +
Subjt:  RMREAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLK-----LQKNNVVPPEI

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)5.6e-0438.1Show/hide
Query:  RMREAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLK-----LQKNNVVPPEI
        R R +F EEL D YG+CG + C+ GDFNV+R   E  + GR    ++     +Q+ N+  P +
Subjt:  RMREAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLK-----LQKNNVVPPEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGGCGGGTGGGATGGGAGGCGAAGAGTTCTGGGTTTGGGGGGCTTATAGCCCTGCAACCTAGGATGAGGGAAGCCTTTTCGGAGGAGTTAGGGGACTTTTATGG
TTTTTGTGGTTCTAGATGTTGTGTGGTTGGGGACTTCAATGTTATTCGCTCCCCTGAGGAAAATGTCTCTAGAGGTAGAGCACTAGACCATTTGAAGCTGCAAAAAAACA
ACGTCGTACCCCCAGAAATTGGGACGAAATCGGAAGCTGAAGCTGTCCAAATGACAAAGATCATGGTAACCAAGATCATCATCTCTGGACTTGCAATGAAGGGTTACCAC
CTTGTTGTCGGATCAAGCATTTTTTATCATCATCGTGACCTTGTCATAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGGCGGGTGGGATGGGAGGCGAAGAGTTCTGGGTTTGGGGGGCTTATAGCCCTGCAACCTAGGATGAGGGAAGCCTTTTCGGAGGAGTTAGGGGACTTTTATGG
TTTTTGTGGTTCTAGATGTTGTGTGGTTGGGGACTTCAATGTTATTCGCTCCCCTGAGGAAAATGTCTCTAGAGGTAGAGCACTAGACCATTTGAAGCTGCAAAAAAACA
ACGTCGTACCCCCAGAAATTGGGACGAAATCGGAAGCTGAAGCTGTCCAAATGACAAAGATCATGGTAACCAAGATCATCATCTCTGGACTTGCAATGAAGGGTTACCAC
CTTGTTGTCGGATCAAGCATTTTTTATCATCATCGTGACCTTGTCATAAATTAG
Protein sequenceShow/hide protein sequence
MAWRVGWEAKSSGFGGLIALQPRMREAFSEELGDFYGFCGSRCCVVGDFNVIRSPEENVSRGRALDHLKLQKNNVVPPEIGTKSEAEAVQMTKIMVTKIIISGLAMKGYH
LVVGSSIFYHHRDLVIN