CuGenDBv2

Gene ID	Lsi09G011730
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	small acidic protein 1
Genome location	chr09:18975359..18980934
RNA-Seq Expression	Lsi09G011730
Synteny	Lsi09G011730
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593800.1 Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]

5.0e-24

96.83

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Query:  EMRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        EMRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  EMRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

KAG7026131.1 Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.0e-24

96.83

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Query:  EMRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        EMRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  EMRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

XP_022964281.1 small acidic protein 1 [Cucurbita moschata]

1.9e-23

96.77

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

XP_023513491.1 small acidic protein 1 [Cucurbita pepo subsp. pepo]

4.2e-23

95.16

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLAD+DFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

XP_038875245.1 small acidic protein 1 [Benincasa hispida]

1.1e-23

98.39

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNK1 Uncharacterized protein

1.3e-22

95.16

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MR +PMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A1S3CCM1 small acidic protein 1

1.7e-22

93.55

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MR +PMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A5A7SMJ5 Small acidic protein 1

1.7e-22

93.55

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MR +PMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A6J1HIH2 small acidic protein 1

9.2e-24

96.77

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A6J1KE12 small acidic protein 1

9.2e-24

96.77

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

SwissProt top hits

e value

%identity

Alignment

Q1ECS0 Small acidic protein 2

2.1e-04

43.66

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Query:  EEMRP-TPMEFFAELEEHGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN
        + MRP    +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSDIN
Subjt:  EEMRP-TPMEFFAELEEHGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN

Q9T0H2 Small acidic protein 1

2.9e-14

58.06

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRP  ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+DIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

Arabidopsis top hits

e value

%identity

Alignment

AT3G24280.1 small acidic protein 2

1.5e-05

43.66

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Query:  EEMRP-TPMEFFAELEEHGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN
        + MRP    +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSDIN
Subjt:  EEMRP-TPMEFFAELEEHGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN

AT4G13520.1 small acidic protein 1

2.0e-15

58.06

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRP  ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+DIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

Sequences

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CDS sequence

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mRNA sequence

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AAGAAAAGAGGATTAGATTACCTTGAAAATCCAGACACTATCGATTACTTCATCCAAGATCCCAGAAGGTTGGTCTTCGAATTCCGGCTCCGGCTCATCGGACCACCAAC
GCCGCCGATTCTTCCGGGTGGTGGTTCGGAAGCGAATGCCGGGATCGAAGCCTTGTTGGTGGTCGTCTTCGTCGTCGGCTTCAGAGTGTTCATGTCTGCGTCTGAAATTG
TGGGAGCTGAAGAAATGAGGCCTACACCGATGGAATTCTTTGCGGAGCTGGAAGAACATGGATCGACGGTTGCCATGGACGTGGACGATGTAGACCCACTTGAGATATTG
GGCGAGGGTGTCATCTCGGCCGAGAACAAGCTTGCCGACGCCGATTTCTTCAATTCCTTCGAGGACGATTTTGATGACTCTGACATCAACTGAGATTCTTTTGCGTGGTT
TCGTTCAAAAGAAGTAGTTAATTTCCCAATTCTATGTTTTTGCTTCTCTTGATGAAACAAAGATGATAGATGCTACCATGCCCTAGTTTGTTTTAGCCTTTAGGGAATTC
ACTGCTCTGTTTGCTTCGTGATAAATTGAATACTTTTGACATGCCTTACTTTCTGAACTACTTGATTGGTTATCCCATATTTTCTTTTGCCTCTCAAGCATGATGGTTGT
TAACCTTGTAATCTTTGTCATTAGTTGCAAGGTGAACTAAGGGGAATGTGTTTATATGTAGCAGAAAA

Protein sequence

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KKRGLDYLENPDTIDYFIQDPRRLVFEFRLRLIGPPTPPILPGGGSEANAGIEALLVVVFVVGFRVFMSASEIVGAEEMRPTPMEFFAELEEHGSTVAMDVDDVDPLEIL
GEGVISAENKLADADFFNSFEDDFDDSDIN

Lsi09G011730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome