CuGenDBv2

Gene ID	Lsi09G011840
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	40S ribosomal protein S3a
Genome location	chr09:19109909..19110662
RNA-Seq Expression	Lsi09G011840
Synteny	Lsi09G011840
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005829 - cytosol (cellular component) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134125.1 40S ribosomal protein S3a [Cucumis sativus]

7.8e-68

61.98

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL +DEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA + AVEGATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

XP_008438626.1 PREDICTED: 40S ribosomal protein S3a [Cucumis melo]

2.7e-68

62.36

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL +DEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AAVEGATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

XP_022956208.1 40S ribosomal protein S3a-like [Cucurbita moschata]

3.0e-67

61.6

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF++SLADL DDEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AA E ATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

XP_022979234.1 40S ribosomal protein S3a-like [Cucurbita maxima]

3.0e-67

61.6

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF++SLADL DDEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AA E ATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

XP_038875051.1 40S ribosomal protein S3a [Benincasa hispida]

9.3e-69

62.74

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL DDEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIMINQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AAVEGATE+VGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4P6 40S ribosomal protein S3a

3.8e-68

61.98

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL +DEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA + AVEGATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

A0A1S3AXI4 40S ribosomal protein S3a

1.3e-68

62.36

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL +DEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AAVEGATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

A0A5D3CZ21 40S ribosomal protein S3a

3.8e-68

61.98

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL +DEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA + AVEGATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

A0A6J1GW62 40S ribosomal protein S3a

1.4e-67

61.6

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF++SLADL DDEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AA E ATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

A0A6J1IW45 40S ribosomal protein S3a

1.4e-67

61.6

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF++SLADL DDEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AA E ATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

3.5e-63

56.65

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKA DPFAKKDWYDIKAPSVF V+NV KTLV+ TQGTK ASEGLKH VF+ISLADL  DE+ AYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM N A+SCDLK+LV+KFIPESIG  +EIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNV+I+KVKILKAPK+ LGKLM   G     +G +LERPA +   EG TEV+GA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

P33444 40S ribosomal protein S3a

1.5e-61

54.92

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKA DPFAKKDWYDIKAPSVF+V+NV KTLVT TQGTK ASEGL+H VF+ISLADL  DE+H++RKI LRA+D+QG+N     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQA SCDLK LV+KFIPESIG  +EIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM          +  +L+RPA +A  E  TEV+GA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA

P49198 40S ribosomal protein S3a

5.1e-62

55.51

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NV KTLVT TQGTK ASEGLKH VF++SLADL +DE+H+YRKI LRA+DVQG+N     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    IKQIR KMREIM+ QA +CDLK+LV+KFIPESIG  +EIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ +GKLM   G     +G +L+RPA +AA E ATEV+GA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

Q8GTE3 40S ribosomal protein S3a

1.3e-62

55.89

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKA DPF+KKDWYDIKAPSVF VKNV KTLV+ TQGTK ASEGLKH VF+ISLADL  DE++A+RKI LRA+DVQG+N     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMREIM+NQA+SCDLK+LVRKFIPE IG  KEIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILK+PK+ LGKLM   G     +G ++E PA +  VEG  E+VGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

Q9MBB3 40S ribosomal protein S3a

5.6e-61

56.27

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAP+VF  KNV KTLV+ TQGTK ASEGLKH VF++ LADL  DE+ AYRKI LRA+DVQG+N     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KM EIM NQASSCDLK+LV KFIPESIG  +EIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI PLQNVFI+KVKILKAPK+ +GKLM   G     +G +LERP  +  VEG TEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

1.3e-60

51.89

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKG+KGGKKKA DPF+KKDWYD+KAPS+FT +NV KTLV+ TQGTK ASEGLKH VF++SLADL  DE++AYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KMR+IM+ +ASSCDLK LV KFIPE+IG  +EIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA
        KAT  I+PLQNVFI+KVKILKAPK+ LGKLM       +  +  +++RPA + AVE  TE++GA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA

AT4G34670.1 Ribosomal protein S3Ae

7.1e-59

51.14

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKG+KGGKKKA DPF+KKDWYD+KAP  FT +NV KTLV+ TQGTK ASEGLKH VF++SLADL +DE++AYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                                    I+QIR KM EIM+ +ASSCDLK+LV KFIPE+IG  +EIE
Subjt:  ------------------------------------------------------------IKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA
        KAT  I+PLQNVFI+KVKILKAPK+ LGKLM       +  +  +++RPA +  VE  TE++GA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCGTCGGCAAGAACAAGCAGATTTCAAAGGGAAAGAAGGGTGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAAGACTGGTATGATATCAAGGCTCCTTCAGT
TTTCACTGTTAAGAATGTGAAAAAGACTCTTGTTACACACACTCAGGGTACCAAGTTTGCATCTGAAGGACTCAAACATAGTGTCTTCAAGATCTCTTTGGCTGATCTTC
ATGATGATGAAGAGCATGCTTACAGAAAGATTCCATTGAGAGCAAAAGATGTTCAAGGGAGGAATATCAAGCAGATCCGCTGCAAGATGAGAGAGATCATGATCAACCAA
GCTTCCTCTTGTGATTTGAAGCAATTGGTTCGCAAGTTCATTCCAGAGTCAATTGGCAAGGACAAGGAGATCGAAAAGGCAACATCCAGTATCCACCCACTTCAAAATGT
GTTTATCCAAAAAGTTAAAATTTTGAAAGCTCCCAAATACGGTCTTGGGAAGTTAATGGGAGGTTCACGGAGATTACTCGGAAGACTTGAGAGACCTGCTGGCAAAGCTG
CAGTAGAGGGGGCTACTGAAGTTGTTGGAGCTTGA

mRNA sequence

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Protein sequence

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MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNIKQIRCKMREIMINQ
ASSCDLKQLVRKFIPESIGKDKEIEKATSSIHPLQNVFIQKVKILKAPKYGLGKLMGGSRRLLGRLERPAGKAAVEGATEVVGA

Lsi09G011840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome