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Lsi09G011900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G011900
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHir1
Genome locationchr09:19146833..19150990
RNA-Seq ExpressionLsi09G011900
SyntenyLsi09G011900
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK16764.1 uncharacterized protein E5676_scaffold96G00180 [Cucumis melo var. makuwa]3.1e-6792.26Show/hide
Query:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA
        MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSR+RP STN  LDQLKYIRE++EIRLSMQPLELIKRVREIQ+EAYYET+ VQ+KDSKQNA
Subjt:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
        AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTL+SPSQ RKHN
Subjt:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
XP_004147168.1 uncharacterized protein LOC101209470 [Cucumis sativus]7.0e-6790.38Show/hide
Query:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA
        MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLS ASSRNRP STN  LDQLKYI+E++EIRLSMQPLELIKRVREIQ+EAYYET+ VQ+KDSKQNA
Subjt:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHNF
        A+DLSKRLKDFRSLNDASSLKALEEWRKRKMERARLRE+EKNGTL+SPSQ RKHNF
Subjt:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHNF
XP_008460696.1 PREDICTED: uncharacterized protein LOC103499464 [Cucumis melo]9.1e-6791.61Show/hide
Query:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA
        MEVQQSWRLRFSFRNATIALC LNLVAAFLLLQGFLSAASSR+RP STN  LDQLKYIRE++EIRLSMQPLELIKRVREIQ+EAYYET+ VQ+KDSKQNA
Subjt:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
        AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTL+SPSQ RKHN
Subjt:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
XP_022138362.1 uncharacterized protein LOC111009555 [Momordica charantia]2.8e-6892.26Show/hide
Query:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA
        MEVQQ WRLRFSF+NATIA+CLLNLVAAF LLQGFLSAASSRNRPSSTNP+L QLKYIRESEEIR +MQPLELIKRVREI++EA+YET+VVQEKDSKQNA
Subjt:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
        AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
Subjt:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
XP_038874445.1 uncharacterized protein LOC120067104 [Benincasa hispida]2.6e-6994.87Show/hide
Query:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA
        MEVQQSWRLRFSFRNATIALCLLNLVA FLLLQGFLSAASSRNRPSSTN NLDQLKYIRESEEIRLSMQPLELIKRVREIQQEA+YET+ VQ+KDSKQNA
Subjt:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHNF
        AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSS  QPRKHNF
Subjt:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHNF
TrEMBL top hitse value%identityAlignment
A0A0A0LNL1 Uncharacterized protein3.4e-6790.38Show/hide
Query:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA
        MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLS ASSRNRP STN  LDQLKYI+E++EIRLSMQPLELIKRVREIQ+EAYYET+ VQ+KDSKQNA
Subjt:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHNF
        A+DLSKRLKDFRSLNDASSLKALEEWRKRKMERARLRE+EKNGTL+SPSQ RKHNF
Subjt:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHNF
A0A1S3CD43 uncharacterized protein LOC1034994644.4e-6791.61Show/hide
Query:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA
        MEVQQSWRLRFSFRNATIALC LNLVAAFLLLQGFLSAASSR+RP STN  LDQLKYIRE++EIRLSMQPLELIKRVREIQ+EAYYET+ VQ+KDSKQNA
Subjt:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
        AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTL+SPSQ RKHN
Subjt:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
A0A5A7SNT0 Uncharacterized protein4.4e-6791.61Show/hide
Query:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA
        MEVQQSWRLRFSFRNATIALC LNLVAAFLLLQGFLSAASSR+RP STN  LDQLKYIRE++EIRLSMQPLELIKRVREIQ+EAYYET+ VQ+KDSKQNA
Subjt:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
        AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTL+SPSQ RKHN
Subjt:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
A0A5D3D0K8 Uncharacterized protein1.5e-6792.26Show/hide
Query:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA
        MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSR+RP STN  LDQLKYIRE++EIRLSMQPLELIKRVREIQ+EAYYET+ VQ+KDSKQNA
Subjt:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
        AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTL+SPSQ RKHN
Subjt:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
A0A6J1CAW5 uncharacterized protein LOC1110095551.4e-6892.26Show/hide
Query:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA
        MEVQQ WRLRFSF+NATIA+CLLNLVAAF LLQGFLSAASSRNRPSSTNP+L QLKYIRESEEIR +MQPLELIKRVREI++EA+YET+VVQEKDSKQNA
Subjt:  MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
        AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
Subjt:  AIDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04555.1 unknown protein9.1e-4160.4Show/hide
Query:  VQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLD-QLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAA
        +   WR+RFSF+NATIAL ++N++    LLQGF +++SS +  SS+   +  QL+YI+E+EE+RL MQPLELI+RVREI+QEA    +  Q+KD KQ  A
Subjt:  VQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLD-QLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAA

Query:  IDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQ
        +DLSKRLKDFR+LNDASSLKALEEWRKRKMERAR R++EK G +SS ++
Subjt:  IDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTCAGCAGTCATGGAGATTGAGATTCTCGTTTAGGAATGCGACCATTGCTTTGTGCTTGTTGAATTTAGTGGCAGCTTTTCTTCTGCTTCAGGGTTTTTTATC
TGCTGCTTCTTCCCGCAACAGACCCTCATCAACAAATCCCAATTTGGATCAACTCAAATATATCAGGGAATCTGAAGAGATTCGACTTTCCATGCAACCTTTGGAACTGA
TTAAAAGGGTAAGGGAAATTCAGCAGGAAGCATATTATGAAACACAAGTTGTACAAGAAAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAAAGATTGAAAGAC
TTCCGTTCTCTAAATGATGCTTCCAGCTTAAAAGCTCTTGAGGAATGGCGCAAAAGGAAGATGGAAAGAGCAAGACTGCGTGAAATGGAGAAAAATGGGACACTGAGTTC
TCCTTCTCAGCCTCGGAAACACAACTTCTAA
mRNA sequenceShow/hide mRNA sequence
TTAATGTTTAATCAAATTAATTATAATTAATACATTATTTAATATATAAGAAGAACCAAAGCTGAAGAGAAGAAGAGGGAGCAGCAGCTGAATTGAGTTGAAGAATTTCC
CTTGAAACACAAATACGTGTTCTTGACTTCAAATTTCAGAGAGGAGTGTTTATACGAATCTCCTCCCATTTTCCCCAATTACCCACAAACTGATTTCCTTCATTTCTCAA
AATCATCGCCATCATCAGCTACGGAATTCTGTGGGGTTGCTTCTAATTTCTTCGGCTTCGTTGTAAACAGCTGAATGGTATTTGGGAAATTGAAGGGAATATCGATTGAG
AGTATCTGTAGAAGAAGAAAATGGAGGTTCAGCAGTCATGGAGATTGAGATTCTCGTTTAGGAATGCGACCATTGCTTTGTGCTTGTTGAATTTAGTGGCAGCTTTTCTT
CTGCTTCAGGGTTTTTTATCTGCTGCTTCTTCCCGCAACAGACCCTCATCAACAAATCCCAATTTGGATCAACTCAAATATATCAGGGAATCTGAAGAGATTCGACTTTC
CATGCAACCTTTGGAACTGATTAAAAGGGTAAGGGAAATTCAGCAGGAAGCATATTATGAAACACAAGTTGTACAAGAAAAAGACTCCAAGCAGAATGCTGCCATTGATC
TTTCTAAAAGATTGAAAGACTTCCGTTCTCTAAATGATGCTTCCAGCTTAAAAGCTCTTGAGGAATGGCGCAAAAGGAAGATGGAAAGAGCAAGACTGCGTGAAATGGAG
AAAAATGGGACACTGAGTTCTCCTTCTCAGCCTCGGAAACACAACTTCTAAATCTATATGAACTTTCTTTGTACCTTGTATAACAAACTTGTCTATGTTGATTCTAAAGT
GAAAAGCATCATACCTCTTCTTTTTATACCTGGCTGCCCTTCTACAAAAACAGAGTTTGAGTGATTCAGAAGCTCAGAGTTGATTCTATATATTAAATTAGTACAACAAT
TGTTTATGGACAACATATGACGGGTATTTAGAATGTTTTACCTGTCACATTATCACTATATTTCAAAAGGTATCATAATATTACAAATTCA
Protein sequenceShow/hide protein sequence
MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRNRPSSTNPNLDQLKYIRESEEIRLSMQPLELIKRVREIQQEAYYETQVVQEKDSKQNAAIDLSKRLKD
FRSLNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHNF