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Lsi09G012200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G012200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEmbryo sac development arrest protein
Genome locationchr09:19620895..19623292
RNA-Seq ExpressionLsi09G012200
SyntenyLsi09G012200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050715.1 hypothetical protein E6C27_scaffold560G00090 [Cucumis melo var. makuwa]1.1e-3683.16Show/hide
Query:  ADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        AD++SANRLLAGYLAHEFLSNGTLFGEKYE AQ+EA+GM+N QS ECKRTKPEAA+  I+K N SYAEVASILKMDG HLPGIVNP QLAWWIKM
Subjt:  ADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

KGN61585.1 hypothetical protein Csa_006307 [Cucumis sativus]7.6e-3885.26Show/hide
Query:  ADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        ADS+SANRLLAGYLAHEFL NGTLFGEKYEPA +EA+GM+NSQSTECKRTK EAA+ SI+K NHSYAEVA ILKMDG HLPGIVNP QLAWWIKM
Subjt:  ADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

XP_023006321.1 uncharacterized protein LOC111499092 [Cucurbita maxima]3.2e-3682.47Show/hide
Query:  GADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPE-AASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        G DSVS+N+LLAGYLAHEFLS GTLFGEKYEP +SEA+GM++SQ +ECKRTKPE AA+PS+RK NHSYAEVASILKMDG HLPGIVNPAQLA WIKM
Subjt:  GADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPE-AASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

XP_023547636.1 uncharacterized protein LOC111806520 [Cucurbita pepo subsp. pepo]1.4e-3681.82Show/hide
Query:  GADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPE---AASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        G DSVS+N+LLAGYLAHEFLS GTLFGEKYEPA+SEA+GM++SQ +ECKRTKPE   AA+PS+RK NHSYAEVASILKMDG HLPGIVNPAQLA WIKM
Subjt:  GADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPE---AASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

XP_038875618.1 uncharacterized protein LOC120068023 [Benincasa hispida]2.7e-4391.67Show/hide
Query:  GADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        GADS+SANRLLAGYLAHEFL+NGTLFGEKYEPAQSE +GM+N QSTECKRTKPEAASPSI+KGNHSYAEVASILKMDG HLPGIVNPAQLAWWIKM
Subjt:  GADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

TrEMBL top hitse value%identityAlignment
A0A0A0LI65 Uncharacterized protein3.7e-3885.26Show/hide
Query:  ADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        ADS+SANRLLAGYLAHEFL NGTLFGEKYEPA +EA+GM+NSQSTECKRTK EAA+ SI+K NHSYAEVA ILKMDG HLPGIVNP QLAWWIKM
Subjt:  ADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

A0A5A7UAS9 Uncharacterized protein5.3e-3783.16Show/hide
Query:  ADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        AD++SANRLLAGYLAHEFLSNGTLFGEKYE AQ+EA+GM+N QS ECKRTKPEAA+  I+K N SYAEVASILKMDG HLPGIVNP QLAWWIKM
Subjt:  ADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

A0A6J1H3W4 uncharacterized protein LOC1114601901.9e-3477.23Show/hide
Query:  DSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPE-------AASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIK
        DSVS+N+LLAGYLAHEFLS GTLFGEKYEPA+SEA+GM++SQ +ECKR KPE       AA+PS+RK +HSYAEVASILKMDG HLPGIVNPAQLA WIK
Subjt:  DSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPE-------AASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIK

Query:  M
        M
Subjt:  M

A0A6J1HJY7 uncharacterized protein LOC1114642571.0e-3278.35Show/hide
Query:  GADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPE-AASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        GADSV +NRLLAGYLAHEFLS GTLFGEKYEPA+SEA+GM+ S+  E K+TKPE AA+PS+ K N SYAEVASILKM+G HLPGIVNPAQLA WIKM
Subjt:  GADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPE-AASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

A0A6J1KXG9 uncharacterized protein LOC1114990921.6e-3682.47Show/hide
Query:  GADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPE-AASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        G DSVS+N+LLAGYLAHEFLS GTLFGEKYEP +SEA+GM++SQ +ECKRTKPE AA+PS+RK NHSYAEVASILKMDG HLPGIVNPAQLA WIKM
Subjt:  GADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPE-AASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04000.1 unknown protein8.2e-1441.67Show/hide
Query:  ADSVSANRL-LAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        A+ + +N+L LAGYL+HE+L+ GTLFGE++  A+++A      +S++ K +     +         Y EVA++L+ DG  LPGIVNPAQLA ++K+
Subjt:  ADSVSANRL-LAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

AT3G23440.1 embryo sac development arrest 62.2e-1443.62Show/hide
Query:  DSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM
        ++ + N LLAGY+AHE+L+ GT+ G K     +E +G   S S           S  ++K   SY+EVAS+ K DG H+PG+VNP QLA WI+M
Subjt:  DSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKM

AT5G44060.1 unknown protein1.5e-2053.06Show/hide
Query:  ADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHS---YAEVASILKMDGTHLPGIVNPAQLAWWIKM
        A+ V +N+LLAGYLAHEFL+NGTLFGE + P +++A G   +QS + ++ KP   S  I   +H    Y EVA+IL++DGTHLPGIVNP+QLA ++K+
Subjt:  ADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHS---YAEVASILKMDGTHLPGIVNPAQLAWWIKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGCCGACTCAGTTTCGGCGAATCGGCTTCTAGCTGGCTATCTCGCTCATGAGTTTCTCAGCAACGGCACTTTGTTTGGGGAGAAGTATGAGCCGGCTCAAAG
TGAAGCCATTGGAATGTCTAACTCGCAGTCAACTGAGTGTAAGAGGACAAAGCCGGAAGCCGCCTCGCCGAGCATCAGAAAAGGAAATCATAGCTATGCTGAGGTGGCAA
GCATCCTGAAGATGGATGGGACACACTTGCCTGGAATTGTTAACCCGGCGCAGCTCGCTTGGTGGATTAAAATGTCTGTAATGGATGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAGCCGACTCAGTTTCGGCGAATCGGCTTCTAGCTGGCTATCTCGCTCATGAGTTTCTCAGCAACGGCACTTTGTTTGGGGAGAAGTATGAGCCGGCTCAAAG
TGAAGCCATTGGAATGTCTAACTCGCAGTCAACTGAGTGTAAGAGGACAAAGCCGGAAGCCGCCTCGCCGAGCATCAGAAAAGGAAATCATAGCTATGCTGAGGTGGCAA
GCATCCTGAAGATGGATGGGACACACTTGCCTGGAATTGTTAACCCGGCGCAGCTCGCTTGGTGGATTAAAATGTCTGTAATGGATGCATAA
Protein sequenceShow/hide protein sequence
MEGADSVSANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAIGMSNSQSTECKRTKPEAASPSIRKGNHSYAEVASILKMDGTHLPGIVNPAQLAWWIKMSVMDA