CuGenDBv2

Gene ID	Lsi09G012250
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	COP1-interacting protein 7
Genome location	chr09:19664184..19665968
RNA-Seq Expression	Lsi09G012250
Synteny	Lsi09G012250
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_023547770.1 COP1-interacting protein 7-like isoform X1 [Cucurbita pepo subsp. pepo]

1.0e-67

93.71

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDSATFQLTPTRTRCDLI+SANGKSEKIASGLLNPFLAHLK AQEQMARGGYSIILEPDPR+DRTWFTKGTMERFVRFVSTPEILERVYT ESE
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG
        ILQIEEAIVIQGN+DMGPNVVDDKQGKPTKP ES TEG+KI+G
Subjt:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG

XP_023547771.1 COP1-interacting protein 7-like isoform X2 [Cucurbita pepo subsp. pepo]

1.0e-67

93.71

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDSATFQLTPTRTRCDLI+SANGKSEKIASGLLNPFLAHLK AQEQMARGGYSIILEPDPR+DRTWFTKGTMERFVRFVSTPEILERVYT ESE
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG
        ILQIEEAIVIQGN+DMGPNVVDDKQGKPTKP ES TEG+KI+G
Subjt:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG

XP_023547772.1 COP1-interacting protein 7-like isoform X3 [Cucurbita pepo subsp. pepo]

1.0e-67

93.71

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDSATFQLTPTRTRCDLI+SANGKSEKIASGLLNPFLAHLK AQEQMARGGYSIILEPDPR+DRTWFTKGTMERFVRFVSTPEILERVYT ESE
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG
        ILQIEEAIVIQGN+DMGPNVVDDKQGKPTKP ES TEG+KI+G
Subjt:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG

XP_038906994.1 COP1-interacting protein 7 isoform X1 [Benincasa hispida]

4.8e-70

96.5

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Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSST+LDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPR+DRTWFTKGTMERFVRFVSTPEILERVYTTESE
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG
        ILQIEEAI+IQGNND GPNVVDDKQGKPTKPPESTTEG KISG
Subjt:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG

XP_038906996.1 COP1-interacting protein 7 isoform X2 [Benincasa hispida]

5.9e-68

95.71

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSST+LDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPR+DRTWFTKGTMERFVRFVSTPEILERVYTTESE
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAK
        ILQIEEAI+IQGNND GPNVVDDKQGKPTKPPESTTE +K
Subjt:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UAW7 Uncharacterized protein

3.8e-65

91.61

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSST LDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEP+ R+D TWFTKGTMERFVRFV TP+ILERVYT ESE
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG
        ILQIEEAIVIQGNNDM PNVVDDKQGKPTK PESTTEG+KI+G
Subjt:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG

A0A6J1H3I3 COP1-interacting protein 7-like isoform X1

5.3e-67

93.01

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDSATFQLTPTRTRCDLI+SANGKSEKIASGLLNPFLAHLK AQEQMARGGYSIILEPDPR+DRTWFTKGTMERFVRFVSTPEILERVYT ESE
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG
        ILQIEEAIVIQGN+DMGPNVVDDKQGKPTK  ES TEG+KI+G
Subjt:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG

A0A6J1H4U9 COP1-interacting protein 7-like isoform X2

3.8e-65

92.31

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDSATFQLTPTRTRCDLI+SANGKSEKIASGLLNPFLAHLK AQEQMARGGYSIILEPDPR+DRTWFTKGTMERFVRFVSTPEILERVYT ESE
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG
        ILQIEEAIVIQGN+DMGPN VDDKQGKPTK  ES TEG+KI+G
Subjt:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG

A0A6J1KZT2 COP1-interacting protein 7-like isoform X2

4.1e-67

93.01

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDSATFQLTPTRTRCDLI+SAN KSEKIASGLLNPFLAHLK AQEQMARGGYSIILEPDPR+DRTWFTKGTMERFVRFVSTPEILERVYT ESE
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG
        ILQIEEAIVIQGN+DMGPNVVDDKQGKPTKP ES TEG+KI+G
Subjt:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG

A0A6J1L1U5 COP1-interacting protein 7-like isoform X1

4.1e-67

93.01

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDSATFQLTPTRTRCDLI+SAN KSEKIASGLLNPFLAHLK AQEQMARGGYSIILEPDPR+DRTWFTKGTMERFVRFVSTPEILERVYT ESE
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG
        ILQIEEAIVIQGN+DMGPNVVDDKQGKPTKP ES TEG+KI+G
Subjt:  ILQIEEAIVIQGNNDMGPNVVDDKQGKPTKPPESTTEGAKISG

SwissProt top hits

e value

%identity

Alignment

O80386 COP1-interacting protein 7

1.2e-28

57.41

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        M   TRLD A FQLTPTRTRCDL+I + G++EK+ASG+  PF+ HLK   +Q+++GGYS+ L P       WFTK T++RFVRFV+TPE+LER  T E E
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAI
        I QIE++I
Subjt:  ILQIEEAI

Arabidopsis top hits

e value

%identity

Alignment

AT4G27430.1 COP1-interacting protein 7

8.8e-30

57.41

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        M   TRLD A FQLTPTRTRCDL+I + G++EK+ASG+  PF+ HLK   +Q+++GGYS+ L P       WFTK T++RFVRFV+TPE+LER  T E E
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAI
        I QIE++I
Subjt:  ILQIEEAI

AT5G43310.1 COP1-interacting protein-related

3.3e-45

70.25

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDS  FQLTPTRTRCDL+++ANGK+EKIA+GLL+PFLAHLK A++Q+ +GGYSIIL+P+   +  WFTKGT+ERFVRFVSTPE++ERVYT E+E
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVV
        I+QI+EAI IQ N++M   VV
Subjt:  ILQIEEAIVIQGNNDMGPNVV

AT5G43310.2 COP1-interacting protein-related

2.0e-45

65.44

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDS  FQLTPTRTRCDL+++ANGK+EKIA+GLL+PFLAHLK A++Q+ +GGYSIIL+P+   +  WFTKGT+ERFVRFVSTPE++ERVYT E+E
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVV-DDKQGKPTKPPEST
        I+QI+EAI IQ N++M   VV DD + K     E +
Subjt:  ILQIEEAIVIQGNNDMGPNVV-DDKQGKPTKPPEST

AT5G43310.3 COP1-interacting protein-related

2.0e-45

65.44

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDS  FQLTPTRTRCDL+++ANGK+EKIA+GLL+PFLAHLK A++Q+ +GGYSIIL+P+   +  WFTKGT+ERFVRFVSTPE++ERVYT E+E
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVV-DDKQGKPTKPPEST
        I+QI+EAI IQ N++M   VV DD + K     E +
Subjt:  ILQIEEAIVIQGNNDMGPNVV-DDKQGKPTKPPEST

AT5G43310.4 COP1-interacting protein-related

2.0e-45

65.44

Show/hide

Query:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE
        MKSSTRLDS  FQLTPTRTRCDL+++ANGK+EKIA+GLL+PFLAHLK A++Q+ +GGYSIIL+P+   +  WFTKGT+ERFVRFVSTPE++ERVYT E+E
Subjt:  MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESE

Query:  ILQIEEAIVIQGNNDMGPNVV-DDKQGKPTKPPEST
        I+QI+EAI IQ N++M   VV DD + K     E +
Subjt:  ILQIEEAIVIQGNNDMGPNVV-DDKQGKPTKPPEST

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGTCTTCCACTAGGCTCGATTCGGCTACTTTTCAGCTCACACCTACTCGAACCAGGTGTGATTTGATTATATCTGCGAATGGAAAGTCTGAGAAGATAGCTTCGGG
TTTATTGAATCCTTTTCTTGCCCATTTGAAGATTGCACAAGAACAGATGGCCAGAGGTGGTTATTCCATTATTCTCGAGCCAGACCCTCGCACTGATAGAACGTGGTTCA
CAAAGGGTACAATGGAGAGGTTTGTCCGATTTGTAAGCACCCCTGAAATTTTGGAACGGGTGTACACTACTGAATCAGAGATATTACAGATTGAGGAGGCAATCGTGATT
CAGGGAAACAATGACATGGGGCCAAATGTTGTAGATGACAAGCAAGGAAAGCCTACGAAGCCTCCCGAAAGCACCACCGAAGGTGCTAAAATCAGTGGAGGTTTGTAG

mRNA sequence

Show/hide mRNA sequence

CAAAAAGTTGCACTCTCTTTCCTCTCTTGGTCTTGGATTCTCTCGCTGGTCGCTTGCGGCAGCTCTGTTTCTCTCTCTCTCATGGCAGCTGCCATTAAAGCTCATCTTTA
GAGCTAAATGCCCTTTCTTCCTTAGGTTTCTTCTTCAACTTTTTACTTACAGTTACCGAGCTCTTCTTTTCGTGGCACAAACCTGCTTATCAGTCTTTCGCAATGAAGTC
TTCCACTAGGCTCGATTCGGCTACTTTTCAGCTCACACCTACTCGAACCAGGTGTGATTTGATTATATCTGCGAATGGAAAGTCTGAGAAGATAGCTTCGGGTTTATTGA
ATCCTTTTCTTGCCCATTTGAAGATTGCACAAGAACAGATGGCCAGAGGTGGTTATTCCATTATTCTCGAGCCAGACCCTCGCACTGATAGAACGTGGTTCACAAAGGGT
ACAATGGAGAGGTTTGTCCGATTTGTAAGCACCCCTGAAATTTTGGAACGGGTGTACACTACTGAATCAGAGATATTACAGATTGAGGAGGCAATCGTGATTCAGGGAAA
CAATGACATGGGGCCAAATGTTGTAGATGACAAGCAAGGAAAGCCTACGAAGCCTCCCGAAAGCACCACCGAAGGTGCTAAAATCAGTGGAGGTTTGTAG

Protein sequence

Show/hide protein sequence

MKSSTRLDSATFQLTPTRTRCDLIISANGKSEKIASGLLNPFLAHLKIAQEQMARGGYSIILEPDPRTDRTWFTKGTMERFVRFVSTPEILERVYTTESEILQIEEAIVI
QGNNDMGPNVVDDKQGKPTKPPESTTEGAKISGGL

Lsi09G012250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome