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Lsi09G012370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G012370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationchr09:19993059..19995830
RNA-Seq ExpressionLsi09G012370
SyntenyLsi09G012370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651815.1 hypothetical protein Csa_006392, partial [Cucumis sativus]3.0e-2775Show/hide
Query:  QTETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYP
        +T+T+KA MF KYFLLLLLAVVLLTTTQALK P +SNQE IP TD    K+PTT T    DP+EESKF++R  PYK+PYKRPPYKKYPPYKKRPPYKKYP
Subjt:  QTETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYP

Query:  PSSH
        PSSH
Subjt:  PSSH

POE15980.1 hypothetical protein BV923_23575 [Pectobacterium odoriferum]2.4e-2985.87Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKRLPYKRP-YKRPPYKKYPPYKKRPPYKKYPPSS
        MFLKYFLLLLLAVVLLTTTQALK P DSNQEVIP+TDE++PTTTTT + DPDEESKFYK+  YKRP YKRPPYKKYPPYKK PPYKKYPPSS
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKRLPYKRP-YKRPPYKKYPPYKKRPPYKKYPPSS

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]5.2e-3284.69Show/hide
Query:  ETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKRLPYKRP-YKRPPYKKYPPYKKRPPYKKYPPSS
        +TQK KMFLKYFLLLLLAVVLLTTTQALK P DSNQEVIP+TDE++PTTTTT + DPDEESKFYK+  YKRP YKRPPYKKYPPYKK PPYKKYPPSS
Subjt:  ETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKRLPYKRP-YKRPPYKKYPPYKKRPPYKKYPPSS

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]4.1e-2975.7Show/hide
Query:  PNRQTETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYK
        P  +T+T KA MFLKYFLLLLLAVVLLTTTQALK P +SNQEVIP TD    K+PTT T    DP+EESKFY+R  PYK+PYKRPPYK+YPPYKKRPPYK
Subjt:  PNRQTETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYK

Query:  KYPPSSH
        KYPPSSH
Subjt:  KYPPSSH

XP_008460638.1 PREDICTED: repetitive proline-rich cell wall protein 3-like [Cucumis melo]2.8e-2578.49Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLA VLL+TTQALK P  S+QEVIP TD    T  TTI  DP+EESKFY+R  PYK+PYKRPPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein2.0e-2975.7Show/hide
Query:  PNRQTETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYK
        P  +T+T KA MFLKYFLLLLLAVVLLTTTQALK P +SNQEVIP TD    K+PTT T    DP+EESKFY+R  PYK+PYKRPPYK+YPPYKKRPPYK
Subjt:  PNRQTETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYK

Query:  KYPPSSH
        KYPPSSH
Subjt:  KYPPSSH

A0A0A0LNP2 Uncharacterized protein6.4e-2873.83Show/hide
Query:  PNRQTETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYK
        P  +T+T+KA MF KYFLLLLLAVVLLTTTQALK P +SNQE IP TD    K+PTT T    DP+EESKF++R  PYK+PYKRPPYKKYPPYKKRPPYK
Subjt:  PNRQTETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYK

Query:  KYPPSSH
        KYPPSSH
Subjt:  KYPPSSH

A0A1S3CE34 repetitive proline-rich cell wall protein 3-like1.3e-2578.49Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLA VLL+TTQALK P  S+QEVIP TD    T  TTI  DP+EESKFY+R  PYK+PYKRPPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like1.3e-2578.49Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLA VLL+TTQALK P  S+QEVIP TD    T  TTI  DP+EESKFY+R  PYK+PYKRPPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

Q8H0R6 Proline-rich protein5.1e-2577.08Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MF KYFLLLLLAVVLLTTTQALK P +SNQE IP TD    K+PTT T    DP+EESKF++R  PYK+PYKRPPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGGCCACAAGGTATGAGGTTCCCAATAGGCAAACTGAAACTCAAAAAGCCAAAATGTTTCTCAAATACTTTCTTTTGCTTCTTCTCGCAGTTGTGCTTCTTAC
CACAACTCAAGCCCTGAAACAGCCCTTGGACTCCAATCAGGAGGTGATTCCGGTGACCGACGAAAAGGTTCCGACGACCACCACCACCATCGACAACGACCCGGACGAAG
AATCAAAGTTCTACAAGAGGTTACCCTACAAGAGGCCTTACAAGAGGCCACCCTACAAGAAGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAGTACCCACCATCC
TCCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCGGCCACAAGGTATGAGGTTCCCAATAGGCAAACTGAAACTCAAAAAGCCAAAATGTTTCTCAAATACTTTCTTTTGCTTCTTCTCGCAGTTGTGCTTCTTAC
CACAACTCAAGCCCTGAAACAGCCCTTGGACTCCAATCAGGAGGTGATTCCGGTGACCGACGAAAAGGTTCCGACGACCACCACCACCATCGACAACGACCCGGACGAAG
AATCAAAGTTCTACAAGAGGTTACCCTACAAGAGGCCTTACAAGAGGCCACCCTACAAGAAGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAGTACCCACCATCC
TCCCACTAA
Protein sequenceShow/hide protein sequence
MAAATRYEVPNRQTETQKAKMFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKRLPYKRPYKRPPYKKYPPYKKRPPYKKYPPS
SH