; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G012410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G012410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionethylene-responsive transcription factor ERF098
Genome locationchr09:20062403..20062777
RNA-Seq ExpressionLsi09G012410
SyntenyLsi09G012410
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460635.1 PREDICTED: ethylene-responsive transcription factor ERF098 [Cucumis melo]2.5e-5186.15Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGG------SSSSAAAPRRQG
        MDEEG+S+NDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGAR+WLGTFNTAEEAARAYDRAAY+MRGHLA+LNFPNEYPSLGG      SSSSAAAPR QG
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGG------SSSSAAAPRRQG

Query:  QGDQSQVIELECLDDKVLEELLEYEEKRKK
             QVIELE LDDKVLEELLEYEEKRKK
Subjt:  QGDQSQVIELECLDDKVLEELLEYEEKRKK

XP_022958792.1 ethylene-responsive transcription factor ERF098-like [Cucurbita moschata]3.6e-5085.94Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLG----GSSSSAAAPRRQGQG
        MDEE RS  DQGGEVRYRGVRRRPWGKFAAEIRDSSR+GARVWLGTFNTAEEAARAYDRAAY+MRGHLA+LNFP+EYPSLG    GSSSSA+A RRQG G
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLG----GSSSSAAAPRRQGQG

Query:  DQSQVIELECLDDKVLEELLEYEEKRKK
         +  VIELECLDDKVLEELLEYEEKRKK
Subjt:  DQSQVIELECLDDKVLEELLEYEEKRKK

XP_023006327.1 ethylene-responsive transcription factor ERF098-like [Cucurbita maxima]7.3e-5185.27Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSA-----AAPRRQGQ
        MDEE RS +DQGGEVRYRGVRRRPWGKFAAEIRDSSR+GARVWLGTFNTAEEAARAYDRAAY+MRGHLA+LNFP+EYPSLGGSSS +     A PRRQGQ
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSA-----AAPRRQGQ

Query:  GDQSQVIELECLDDKVLEELLEYEEKRKK
        G +  VIELECLDDKVLEELLEYEEKRKK
Subjt:  GDQSQVIELECLDDKVLEELLEYEEKRKK

XP_023547375.1 ethylene-responsive transcription factor ERF098-like [Cucurbita pepo subsp. pepo]9.5e-5186.72Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSS----SAAAPRRQGQG
        MDEE RS  DQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAY+MRGHLA+LNFP+EYPSLGGSSS    SA A RRQG G
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSS----SAAAPRRQGQG

Query:  DQSQVIELECLDDKVLEELLEYEEKRKK
         +  VIELECLDDKVLEELLEYEEKRKK
Subjt:  DQSQVIELECLDDKVLEELLEYEEKRKK

XP_038876105.1 ethylene-responsive transcription factor ERF098-like [Benincasa hispida]4.7e-5892.74Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAAAPRRQGQGDQSQ
        MDEEG+S+NDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGAR+WLGTFNTAEEAARAYDRAAY+MRGHLA+LNFPNEYPSLGGSSS+A   RRQGQGDQSQ
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAAAPRRQGQGDQSQ

Query:  VIELECLDDKVLEELLEYEEKRKK
        VIELECLDDKVLEELLEYEEKRKK
Subjt:  VIELECLDDKVLEELLEYEEKRKK

TrEMBL top hitse value%identityAlignment
A0A0A0LI84 AP2/ERF domain-containing protein1.7e-5083.85Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGG------SSSSAAAPRRQG
        MDEEG+S+NDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGAR+WLGTFNTAEEAARAYDRAAY+MRGHLA+LNFPNEYPSLGG      SSSSAAAPR +G
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGG------SSSSAAAPRRQG

Query:  QGDQSQVIELECLDDKVLEELLEYEEKRKK
             QVIELECLDDKVLEELL YEE+R K
Subjt:  QGDQSQVIELECLDDKVLEELLEYEEKRKK

A0A1S3CCW3 ethylene-responsive transcription factor ERF0981.2e-5186.15Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGG------SSSSAAAPRRQG
        MDEEG+S+NDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGAR+WLGTFNTAEEAARAYDRAAY+MRGHLA+LNFPNEYPSLGG      SSSSAAAPR QG
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGG------SSSSAAAPRRQG

Query:  QGDQSQVIELECLDDKVLEELLEYEEKRKK
             QVIELE LDDKVLEELLEYEEKRKK
Subjt:  QGDQSQVIELECLDDKVLEELLEYEEKRKK

A0A5A7VH52 Ethylene-responsive transcription factor ERF0981.2e-5186.15Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGG------SSSSAAAPRRQG
        MDEEG+S+NDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGAR+WLGTFNTAEEAARAYDRAAY+MRGHLA+LNFPNEYPSLGG      SSSSAAAPR QG
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGG------SSSSAAAPRRQG

Query:  QGDQSQVIELECLDDKVLEELLEYEEKRKK
             QVIELE LDDKVLEELLEYEEKRKK
Subjt:  QGDQSQVIELECLDDKVLEELLEYEEKRKK

A0A6J1H2T4 ethylene-responsive transcription factor ERF098-like1.7e-5085.94Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLG----GSSSSAAAPRRQGQG
        MDEE RS  DQGGEVRYRGVRRRPWGKFAAEIRDSSR+GARVWLGTFNTAEEAARAYDRAAY+MRGHLA+LNFP+EYPSLG    GSSSSA+A RRQG G
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLG----GSSSSAAAPRRQGQG

Query:  DQSQVIELECLDDKVLEELLEYEEKRKK
         +  VIELECLDDKVLEELLEYEEKRKK
Subjt:  DQSQVIELECLDDKVLEELLEYEEKRKK

A0A6J1KVJ6 ethylene-responsive transcription factor ERF098-like3.5e-5185.27Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSA-----AAPRRQGQ
        MDEE RS +DQGGEVRYRGVRRRPWGKFAAEIRDSSR+GARVWLGTFNTAEEAARAYDRAAY+MRGHLA+LNFP+EYPSLGGSSS +     A PRRQGQ
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSA-----AAPRRQGQ

Query:  GDQSQVIELECLDDKVLEELLEYEEKRKK
        G +  VIELECLDDKVLEELLEYEEKRKK
Subjt:  GDQSQVIELECLDDKVLEELLEYEEKRKK

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI56.7e-2381.97Show/hide
Query:  RYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNE
        +YRGVRRRPWGK+AAEIRDS+RHGARVWLGTF TAEEAA AYDRAA+ MRG  A+LNFP+E
Subjt:  RYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNE

P93822 Ethylene-responsive transcription factor 141.4e-3362.99Show/hide
Query:  MDEEGRSNNDQGG---EVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAAAPRRQGQGD
        MD+ GRS+   GG   + +YRGVRRRPWGK+AAEIRDS +HG RVWLGTF+TAE+AARAYDRAAY MRG  AILNFP+EY    GSSS+AA         
Subjt:  MDEEGRSNNDQGG---EVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAAAPRRQGQGD

Query:  QSQVIELECLDDKVLEELLEYEEKRKK
          QV E E LDD VL+ELLEY E   K
Subjt:  QSQVIELECLDDKVLEELLEYEEKRKK

Q9LSX0 Ethylene-responsive transcription factor ERF0966.6e-3160.47Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAA-----APRRQGQ
        MD+ GR    + G  +YRGVRRRPWGK+AAEIRDS +HG RVWLGTF+TAEEAARAYD+AAY MRG  AILNFP+EY    G SSS A     +      
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAA-----APRRQGQ

Query:  GDQSQVIELECLDDKVLEELLEYEEKRKK
            QV E E LDD VLEELLE  EK  K
Subjt:  GDQSQVIELECLDDKVLEELLEYEEKRKK

Q9LTC5 Ethylene-responsive transcription factor ERF0981.1e-3357.55Show/hide
Query:  MDEEGRSNNDQG---GEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNE-------------YPSLGGSS
        M+   RS+N+Q     + R+RGVRRRPWGKFAAEIRD SR+GAR+WLGTF TAEEAARAYDRAA+ +RGHLAILNFPNE             Y S   SS
Subjt:  MDEEGRSNNDQG---GEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNE-------------YPSLGGSS

Query:  SSAAAPRRQGQGDQSQVIELECLDDKVLEELLEYEEKRK
        SS +      + +Q +V E E LDDKVLEELL+ EE+++
Subjt:  SSAAAPRRQGQGDQSQVIELECLDDKVLEELLEYEEKRK

Q9LTC6 Ethylene-responsive transcription factor ERF0951.3e-3163.56Show/hide
Query:  EVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSL----GGS-----SSSAAAPRRQGQGDQS-QVIE
        E++YRGVR+RPWGK+AAEIRDS+RHGARVWLGTFNTAE+AARAYDRAA+ MRG  AILNFP+EY  +     GS     +SS++  R  G GD   +VIE
Subjt:  EVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSL----GGS-----SSSAAAPRRQGQGDQS-QVIE

Query:  LECLDDKVLEELLEYEEK
         E LDD +LEELL+Y E+
Subjt:  LECLDDKVLEELLEYEEK

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 141.0e-3462.99Show/hide
Query:  MDEEGRSNNDQGG---EVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAAAPRRQGQGD
        MD+ GRS+   GG   + +YRGVRRRPWGK+AAEIRDS +HG RVWLGTF+TAE+AARAYDRAAY MRG  AILNFP+EY    GSSS+AA         
Subjt:  MDEEGRSNNDQGG---EVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAAAPRRQGQGD

Query:  QSQVIELECLDDKVLEELLEYEEKRKK
          QV E E LDD VL+ELLEY E   K
Subjt:  QSQVIELECLDDKVLEELLEYEEKRKK

AT3G23220.1 Integrase-type DNA-binding superfamily protein9.5e-3363.56Show/hide
Query:  EVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSL----GGS-----SSSAAAPRRQGQGDQS-QVIE
        E++YRGVR+RPWGK+AAEIRDS+RHGARVWLGTFNTAE+AARAYDRAA+ MRG  AILNFP+EY  +     GS     +SS++  R  G GD   +VIE
Subjt:  EVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSL----GGS-----SSSAAAPRRQGQGDQS-QVIE

Query:  LECLDDKVLEELLEYEEK
         E LDD +LEELL+Y E+
Subjt:  LECLDDKVLEELLEYEEK

AT3G23230.1 Integrase-type DNA-binding superfamily protein7.8e-3557.55Show/hide
Query:  MDEEGRSNNDQG---GEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNE-------------YPSLGGSS
        M+   RS+N+Q     + R+RGVRRRPWGKFAAEIRD SR+GAR+WLGTF TAEEAARAYDRAA+ +RGHLAILNFPNE             Y S   SS
Subjt:  MDEEGRSNNDQG---GEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNE-------------YPSLGGSS

Query:  SSAAAPRRQGQGDQSQVIELECLDDKVLEELLEYEEKRK
        SS +      + +Q +V E E LDDKVLEELL+ EE+++
Subjt:  SSAAAPRRQGQGDQSQVIELECLDDKVLEELLEYEEKRK

AT5G43410.1 Integrase-type DNA-binding superfamily protein4.7e-3260.47Show/hide
Query:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAA-----APRRQGQ
        MD+ GR    + G  +YRGVRRRPWGK+AAEIRDS +HG RVWLGTF+TAEEAARAYD+AAY MRG  AILNFP+EY    G SSS A     +      
Subjt:  MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAA-----APRRQGQ

Query:  GDQSQVIELECLDDKVLEELLEYEEKRKK
            QV E E LDD VLEELLE  EK  K
Subjt:  GDQSQVIELECLDDKVLEELLEYEEKRKK

AT5G51190.1 Integrase-type DNA-binding superfamily protein2.9e-2157Show/hide
Query:  NDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNE---YPSLGGSS---SSAAAPRRQGQGDQSQVI
        NDQ     YRGVRRRPWGK+AAEIRD ++ G RVWLGTF+TA EAAR YD+AA+ +RG  AILNFP E   +  LG +    S  A  +RQ   D+SQ+I
Subjt:  NDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNE---YPSLGGSS---SSAAAPRRQGQGDQSQVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGGAAGGGAGGTCCAACAATGATCAAGGTGGTGAGGTTCGATACCGAGGCGTGCGGCGGCGTCCTTGGGGGAAATTTGCAGCGGAGATTCGTGACTCGTCGCG
ACATGGGGCTCGGGTTTGGCTTGGAACGTTCAACACGGCGGAGGAGGCAGCTCGGGCCTATGACCGAGCTGCCTATCTCATGCGTGGTCATTTGGCTATCCTGAATTTCC
CTAACGAATATCCTTCTCTTGGTGGGAGTTCTTCTTCTGCTGCAGCTCCTAGGCGCCAAGGGCAGGGTGATCAAAGCCAAGTGATTGAATTGGAATGTCTTGATGATAAG
GTGCTTGAGGAACTACTTGAGTATGAGGAGAAAAGGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGGAAGGGAGGTCCAACAATGATCAAGGTGGTGAGGTTCGATACCGAGGCGTGCGGCGGCGTCCTTGGGGGAAATTTGCAGCGGAGATTCGTGACTCGTCGCG
ACATGGGGCTCGGGTTTGGCTTGGAACGTTCAACACGGCGGAGGAGGCAGCTCGGGCCTATGACCGAGCTGCCTATCTCATGCGTGGTCATTTGGCTATCCTGAATTTCC
CTAACGAATATCCTTCTCTTGGTGGGAGTTCTTCTTCTGCTGCAGCTCCTAGGCGCCAAGGGCAGGGTGATCAAAGCCAAGTGATTGAATTGGAATGTCTTGATGATAAG
GTGCTTGAGGAACTACTTGAGTATGAGGAGAAAAGGAAGAAGTGA
Protein sequenceShow/hide protein sequence
MDEEGRSNNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYLMRGHLAILNFPNEYPSLGGSSSSAAAPRRQGQGDQSQVIELECLDDK
VLEELLEYEEKRKK