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Lsi09G012480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G012480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHR-like lesion-inducing protein-related
Genome locationchr09:20150945..20153999
RNA-Seq ExpressionLsi09G012480
SyntenyLsi09G012480
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031011 - Ino80 complex (cellular component)
InterPro domainsIPR008637 - HR-like lesion-inducer


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138701.1 uncharacterized protein LOC111009799 [Momordica charantia]7.0e-7594.27Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLN FRRNVS+ FGF+LPVID+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        ILYDFFNYGREKSQFS LLNDF+LHVALAGALLFFIGTKNSISRRQ KK+AHKAKTN
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

XP_022958789.1 uncharacterized protein LOC111459955 [Cucurbita moschata]4.5e-7493.63Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PK+ T RRNVSARFGF LPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        ILYDFFNYGR+KSQFS L+NDF+LHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

XP_023006758.1 uncharacterized protein LOC111499395 [Cucurbita maxima]7.0e-7594.27Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PKL T RRNVSA+FGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        ILYDFFNYGR+KSQFS L+NDF+LHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

XP_023547571.1 uncharacterized protein LOC111806468 [Cucurbita pepo subsp. pepo]4.1e-7594.27Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PK+ T RRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        ILYDFFNYGR+KSQFS L+NDF+LHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

XP_038906663.1 uncharacterized protein LOC120092598 isoform X2 [Benincasa hispida]1.5e-7797.45Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPV+DVSH VAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        ILYDF+NYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

TrEMBL top hitse value%identityAlignment
A0A0A0LNP8 Uncharacterized protein3.2e-7392.36Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGG AAKELLPKLNTFRRN SARFGFDLP IDV+HLVAAFLSLKGIGGLLFVFGSPIGAYLLL+YLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        ILYDFFNYGRE SQF  L+NDFILHVALAGALLFFIGTKNSI R+Q KKKAHKAKTN
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

A0A1S3CE23 uncharacterized protein LOC1034994052.9e-7494.27Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGG AAKELLPKLNTFRRN SARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        ILYDFFNYGRE SQF  L+NDFILHVALAGALLFFIGTKNSI R+Q KKKAHKAKTN
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

A0A6J1CAG6 uncharacterized protein LOC1110097993.4e-7594.27Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLN FRRNVS+ FGF+LPVID+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        ILYDFFNYGREKSQFS LLNDF+LHVALAGALLFFIGTKNSISRRQ KK+AHKAKTN
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

A0A6J1H651 uncharacterized protein LOC1114599552.2e-7493.63Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PK+ T RRNVSARFGF LPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        ILYDFFNYGR+KSQFS L+NDF+LHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

A0A6J1L5U1 uncharacterized protein LOC1114993953.4e-7594.27Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PKL T RRNVSA+FGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        ILYDFFNYGR+KSQFS L+NDF+LHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04340.1 HR-like lesion-inducing protein-related3.2e-4964.33Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFN+FGTDGGPAAKEL PKL+  + ++S+  G  LP ++V  +V A ++LKG+GGLLFV G+  GAYLL +YL + +P
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSI--SRRQLKKKAHKAK
        ILYDF+NYG E  QFS LL +F+  VAL GALLFFIG KNS   S+R LKK+  K K
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSI--SRRQLKKKAHKAK

AT3G23175.1 HR-like lesion-inducing protein-related4.5e-1132.05Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEF--GTDGGPAAKELLPKLNTFRRNVSAR----FGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLY
        M   +F GR+ F+ +F ++A Q + +   G  GGP  K + P +N   +  S      FG  +   DV  +  A +S K    L F+FG  I AY LL  
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEF--GTDGGPAAKELLPKLNTFRRNVSAR----FGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLY

Query:  LAISTPILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKK
           ST I             F T LNDF  ++ L GALL++IG K+++     ++K
Subjt:  LAISTPILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKK

AT3G23190.1 HR-like lesion-inducing protein-related3.0e-1540Show/hide
Query:  GRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFN
        GRV+FAS F++SAW+ +  FG     AA EL PKL  F     A             +VA  + +K +GG+LF+F + +GA LLL+Y AI +PILYDF+N
Subjt:  GRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFN

Query:  YGREKSQFSTLLNDF
           ++  F+     F
Subjt:  YGREKSQFSTLLNDF

AT4G14420.1 HR-like lesion-inducing protein-related5.2e-4458.86Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        M   SFLGR LF S+F+LSAWQ FN+FG DGG +AK L PK N F  +V+   G  LP +D+  LVAA ++LKGIGGLLFVFGS +GAYLLLL+ A++TP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISR-RQLKKKAHKAKTN
        ILYDF+NY  ++ +F  L + F   +AL G LLFFIG KNS    RQL+KKA KAK N
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISR-RQLKKKAHKAKTN

AT5G43460.1 HR-like lesion-inducing protein-related1.6e-4561.54Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFN    DGGPAAKEL PKL+  + ++S+R G  LP I+V  +VA  ++LKG+GGLLFV G+  GAYLL  YL +  P
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSI-SRRQLKKKAHKAK
        ILYDF+NYG ++  FS LL +F+  VAL GALLFFIG KNS  +++ LKK+  K K
Subjt:  ILYDFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSI-SRRQLKKKAHKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCTTCTCTTTCCTCGGACGGGTCCTCTTTGCCTCCCTTTTCATCCTCTCCGCCTGGCAAATGTTCAATGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGA
ATTGCTCCCGAAGTTGAACACTTTTAGAAGAAACGTCTCTGCTAGATTTGGATTCGACCTACCTGTTATCGATGTTTCCCATTTAGTTGCTGCATTTCTGTCTCTTAAAG
GCATTGGAGGCCTTCTCTTTGTATTCGGGAGTCCGATCGGAGCTTATCTTCTGCTTCTCTACTTGGCAATTAGCACCCCAATTCTGTATGACTTCTTCAACTATGGTCGT
GAGAAGTCCCAATTCAGCACACTATTGAATGATTTCATACTGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGAACGAAGAACTCCATTTCGAGGAGGCAACT
GAAGAAGAAGGCACATAAAGCCAAAACAAACTAG
mRNA sequenceShow/hide mRNA sequence
GTGAAATTTATATACTAACCCATTTAAAATAAAATCTTGATGATTCAAAAATTTAAAGTTTTAGTTGATTCTAAAATGAGTTTGAAGTTTTTAAAAGAAAAAACAAGTTT
GAAGTTCTTATAAAAACGGAGTTTGAAGTTTTTTGTTTTTTATAAGAAATATATATCTAATTCATTTTTCCTTTTAGCATTACTGTTTGGGTGTTGAATTTTACCATTTT
AGGCTTCCCTTCTATAATTTCCGCCCCCCGTTGGACTCTGCCGGAGCTCTGAGTTTCCGATCCCTCAAGCTCCAAGGTTCAGATTAGCCCTTCTCTCCCTCTCTGTACAA
ATGGGGTTCTTCTCTTTCCTCGGACGGGTCCTCTTTGCCTCCCTTTTCATCCTCTCCGCCTGGCAAATGTTCAATGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGA
ATTGCTCCCGAAGTTGAACACTTTTAGAAGAAACGTCTCTGCTAGATTTGGATTCGACCTACCTGTTATCGATGTTTCCCATTTAGTTGCTGCATTTCTGTCTCTTAAAG
GCATTGGAGGCCTTCTCTTTGTATTCGGGAGTCCGATCGGAGCTTATCTTCTGCTTCTCTACTTGGCAATTAGCACCCCAATTCTGTATGACTTCTTCAACTATGGTCGT
GAGAAGTCCCAATTCAGCACACTATTGAATGATTTCATACTGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGAACGAAGAACTCCATTTCGAGGAGGCAACT
GAAGAAGAAGGCACATAAAGCCAAAACAAACTAGAAACGTAAGATAAGCCACTACTTCGACTTGAAATCGTTCCTTTCTTTTCCATTCCCTTCACTCATGTTGGGGCTCA
GATGGAAAGGTAGGATTCGATAGCTGGATATTAAATTTGGGTTTTCAAAAAGCTTCTTATTTAATAATTCCTTTTTGTAATAATAGATTTACTCATTTAGGAATTGTAGT
ACTCTTGACTGTCAATTATTGTTGGAATTGAAACTGGGAATTAGTCATTACAGACAAGCATGAAGGGATTTAGAGAAACTGTTTGCCGAGGATTAAAAATCTTTTGTTCA
ATTTAACCATATTTGTAGAATTACATGTTGATATGCATCTTTCTGATATTGATAACTCTTTTGGAGCACCATCTATGTATATCTCGGAAAATCTTAGAGTCTCGTATTGA
TGAAGATGTTTTCGAACCGAACCATCGTTTGCAATCTCTGTACCGTGTGAGGTTTGACATTTCTGCCATTCGTTAAGAATCTATCATCCATTCATCTGGTTTAGGATGAA
AGATGATGGTATTTATTTGTGAGAATGAAGTTTTGGAATAGTTTCTGATCCTCATGAAGCTTCTTTATTATGATGTTTTTGTAATCTCTGAGTGAACAACAATTTACCTT
TATAGAAACTTTTCAGTTTTTTTGGTATCCCAGAG
Protein sequenceShow/hide protein sequence
MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR
EKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN