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Lsi09G012730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G012730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein SIEVE ELEMENT OCCLUSION B-like
Genome locationchr09:20525286..20527088
RNA-Seq ExpressionLsi09G012730
SyntenyLsi09G012730
Gene Ontology termsGO:0010088 - phloem development (biological process)
InterPro domainsIPR027944 - Sieve element occlusion, C-terminal
IPR039299 - Protein SIEVE ELEMENT OCCLUSION


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFN06074.1 sieve element occlusion protein 1 [Cucurbita maxima]2.1e-7770.85Show/hide
Query:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL
        F H  R    I   K+ILFYGGK+PMWIQQFE+R++ILKSDPLI + GSFEIVRIGK+AKG+DDPALMA FW  QW YF V+SQL GS ASE+  DILRL
Subjt:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL

Query:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH
        ISYQNEDGWVVL+VGS P LVGRGILILKLL+EFPKWKQ L    FP AF++YFN+LA KSHQCD+V+LP FSG+IP++VNC EC  FM+  ISFKC H
Subjt:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH

XP_004150431.3 protein SIEVE ELEMENT OCCLUSION B [Cucumis sativus]1.7e-7971.36Show/hide
Query:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL
        F H  R    I   KNILFYGGKDP+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRL
Subjt:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL

Query:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH
        ISYQNEDGWVVLTVG+ P LVGRGILILKLL++FPKWKQ+L    FP  F+EYFN+LA  SHQCD+V+LP FSGWIP++VNC EC  FM+  ISFKC H
Subjt:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH

XP_008465183.1 PREDICTED: protein SIEVE ELEMENT OCCLUSION B-like [Cucumis melo]3.3e-7870.35Show/hide
Query:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL
        F H  R    I   K+ILFYGGK+P+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRL
Subjt:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL

Query:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH
        ISYQNEDGWVVLTVGS P LVGRGILILKLL+E+PKWKQ L    FP   +EYFN+LA +SHQCD+V+LP FSGWIP++VNC EC  FM+  ISFKC H
Subjt:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH

XP_023006703.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucurbita maxima]2.5e-7871.36Show/hide
Query:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL
        F H  R    I   K+ILFYGGK+PMWIQQFE+R++ILKSDPLI + GSFEIVRIGK+AKG+DDPALMA FW  QW YF V+SQL GS ASE+  DILRL
Subjt:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL

Query:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH
        ISYQNE+GWVVL+VGS P LVGRGILILKLL+EFPKWKQ L    FP AF+EYFN+LA KSHQCD+V+LP FSGWIP++VNC EC  FM+  ISFKC H
Subjt:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH

XP_038906501.1 LOW QUALITY PROTEIN: protein SIEVE ELEMENT OCCLUSION B-like [Benincasa hispida]1.9e-7870.35Show/hide
Query:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL
        F H  R    I   KNILFYGGK+P+WIQQFE+R++IL++DPLIM+ GSFEIVRIGKDA G+DDPALMA FWT QW YF V+SQL GS ASE+  DILRL
Subjt:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL

Query:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH
        ISYQNEDGWVVL+VGS P LVGRGILILKLL EFPKWKQ L    FP  F++YFN+LA K+HQCD+V+LP FSGWIP++VNC EC  FM+  ISFKC H
Subjt:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH

TrEMBL top hitse value%identityAlignment
A0A0A0LIA4 Uncharacterized protein4.2e-7970.85Show/hide
Query:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL
        F H  R    I   KNILFYGGKDP+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRL
Subjt:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL

Query:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH
        ISYQNEDGWVVLTVG+ P LVGRGILILKLL++FPKWKQ+L    FP  F+EYFN+LA  SHQCD+V+LP FSGWIP++VNC EC  FM+  IS KC H
Subjt:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH

A0A1S3CNB5 protein SIEVE ELEMENT OCCLUSION B-like1.6e-7870.35Show/hide
Query:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL
        F H  R    I   K+ILFYGGK+P+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRL
Subjt:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL

Query:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH
        ISYQNEDGWVVLTVGS P LVGRGILILKLL+E+PKWKQ L    FP   +EYFN+LA +SHQCD+V+LP FSGWIP++VNC EC  FM+  ISFKC H
Subjt:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH

A0A5D3E2S2 Protein SIEVE ELEMENT OCCLUSION B-like1.6e-7870.35Show/hide
Query:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL
        F H  R    I   K+ILFYGGK+P+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRL
Subjt:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL

Query:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH
        ISYQNEDGWVVLTVGS P LVGRGILILKLL+E+PKWKQ L    FP   +EYFN+LA +SHQCD+V+LP FSGWIP++VNC EC  FM+  ISFKC H
Subjt:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH

A0A6J1L5P1 protein SIEVE ELEMENT OCCLUSION B-like1.2e-7871.36Show/hide
Query:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL
        F H  R    I   K+ILFYGGK+PMWIQQFE+R++ILKSDPLI + GSFEIVRIGK+AKG+DDPALMA FW  QW YF V+SQL GS ASE+  DILRL
Subjt:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL

Query:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH
        ISYQNE+GWVVL+VGS P LVGRGILILKLL+EFPKWKQ L    FP AF+EYFN+LA KSHQCD+V+LP FSGWIP++VNC EC  FM+  ISFKC H
Subjt:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH

I6V4B3 Sieve element occlusion protein 11.0e-7770.85Show/hide
Query:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL
        F H  R    I   K+ILFYGGK+PMWIQQFE+R++ILKSDPLI + GSFEIVRIGK+AKG+DDPALMA FW  QW YF V+SQL GS ASE+  DILRL
Subjt:  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRL

Query:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH
        ISYQNEDGWVVL+VGS P LVGRGILILKLL+EFPKWKQ L    FP AF++YFN+LA KSHQCD+V+LP FSG+IP++VNC EC  FM+  ISFKC H
Subjt:  ISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACTTCCTCTATTTCATTGCATTGGAGGACTTTTCCCTAACTCTGCTTTTTTACATCTTCTCAGAGCATTGAAGAGGATCGACCATGGGAAAAACATCCTATTCTA
TGGAGGAAAAGACCCGATGTGGATCCAACAATTTGAAGATCGAATAAAAATTTTGAAAAGTGATCCTTTGATAATGGAAAAGGGTTCATTTGAAATTGTACGTATAGGAA
AAGATGCAAAAGGAAAGGATGATCCAGCACTTATGGCTCATTTTTGGACAACACAATGGAGCTATTTTGCAGTCAGGAGCCAATTGAGAGGTTCACGTGCGAGTGAATCA
ATAAACGACATCTTAAGATTGATTTCATACCAAAATGAAGATGGTTGGGTTGTTCTAACCGTAGGATCAACCCCAGAGCTAGTTGGGCGTGGGATTTTGATATTGAAATT
GCTTAAAGAGTTCCCAAAATGGAAGCAAGATTTAAATCGGATGGACTTCCCTCGTGCCTTTAAAGAATACTTCAATAAATTGGCTCCCAAAAGTCACCAATGTGATCAAG
TAGTTCTTCCAAAGTTCAGTGGATGGATTCCTATAGTTGTGAATTGTACTGAATGTGCTGATTTCATGAAGGTTAATATTAGCTTCAAGTGCCGCCATTTGAGGAGCTCA
AATGTGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATACTTCCTCTATTTCATTGCATTGGAGGACTTTTCCCTAACTCTGCTTTTTTACATCTTCTCAGAGCATTGAAGAGGATCGACCATGGGAAAAACATCCTATTCTA
TGGAGGAAAAGACCCGATGTGGATCCAACAATTTGAAGATCGAATAAAAATTTTGAAAAGTGATCCTTTGATAATGGAAAAGGGTTCATTTGAAATTGTACGTATAGGAA
AAGATGCAAAAGGAAAGGATGATCCAGCACTTATGGCTCATTTTTGGACAACACAATGGAGCTATTTTGCAGTCAGGAGCCAATTGAGAGGTTCACGTGCGAGTGAATCA
ATAAACGACATCTTAAGATTGATTTCATACCAAAATGAAGATGGTTGGGTTGTTCTAACCGTAGGATCAACCCCAGAGCTAGTTGGGCGTGGGATTTTGATATTGAAATT
GCTTAAAGAGTTCCCAAAATGGAAGCAAGATTTAAATCGGATGGACTTCCCTCGTGCCTTTAAAGAATACTTCAATAAATTGGCTCCCAAAAGTCACCAATGTGATCAAG
TAGTTCTTCCAAAGTTCAGTGGATGGATTCCTATAGTTGTGAATTGTACTGAATGTGCTGATTTCATGAAGGTTAATATTAGCTTCAAGTGCCGCCATTTGAGGAGCTCA
AATGTGATGTGA
Protein sequenceShow/hide protein sequence
MILPLFHCIGGLFPNSAFLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASES
INDILRLISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRHLRSS
NVM