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Lsi09G012870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G012870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:20725915..20726986
RNA-Seq ExpressionLsi09G012870
SyntenyLsi09G012870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593870.1 hypothetical protein SDJN03_13346, partial [Cucurbita argyrosperma subsp. sororia]3.0e-6172.83Show/hide
Query:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS
        MAFRLGACPRATVASHFP LN  +FL+     +VEI+R  G RR+RIRVSDGGESYLGMWKNAV+RQRK IEFQKV+EN VGNDD +GGD  ADQLEKKS
Subjt:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS

Query:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV--AVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT
        ++FSKILQVP EERDRIQRMQVIHRAAAAIAAARAL+GETG V  A  +SSS D ++S+NLN  N+G LL+REED   +Q  NT
Subjt:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV--AVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT

XP_022930393.1 uncharacterized protein LOC111436854 [Cucurbita moschata]2.6e-6072.58Show/hide
Query:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS
        MAFRLGA PRATVASHFP LN  NFL+     +VEI+R  G RRLRIRVSDGGESYLGMWKNAV+RQRK IEFQKV+EN VGN D +GGD  ADQLEKKS
Subjt:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS

Query:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV----AVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT
        ++FSKILQVP EERDRIQRMQVIHRAAAAIAAARAL+GETG V    A  +SSS D ++S+NLN  N+GGLL+REED   +Q  NT
Subjt:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV----AVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT

XP_023000480.1 uncharacterized protein LOC111494737 [Cucurbita maxima]7.4e-6072.04Show/hide
Query:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS
        MAFRLGA PRATVASHFP LN  NFL+     + EI+R  G RRLRIRVSDGGESYLGMWKNAV+RQRK IEFQKV+EN VGN D +GGD  ADQLEKKS
Subjt:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS

Query:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV----AVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT
        ++FSKILQVP EERDRIQRMQVIHRAAAAIAAARAL+GETG V    A  +SSS D ++S+NLN  N+GGLL+REED   +Q  NT
Subjt:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV----AVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT

XP_023514387.1 uncharacterized protein LOC111778665 [Cucurbita pepo subsp. pepo]1.5e-6075.43Show/hide
Query:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS
        MAFRLGA PRATVASHFP LN  NFL+     +VEI+R    RRLRIRVSDGGESYLGMWKNAV+RQRK IEFQKV+EN VGNDD +GGD  ADQLEKKS
Subjt:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS

Query:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV--AVGDSSSHDLNISLNLNSSNNGGLLDREED
        ++FSKILQVP EERDRIQRMQVIHRAAAAIAAARAL+GETG V  A  +SSS D ++S+NLN  N+GGLL+REED
Subjt:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV--AVGDSSSHDLNISLNLNSSNNGGLLDREED

XP_038907156.1 uncharacterized protein LOC120092960 [Benincasa hispida]1.5e-7385.16Show/hide
Query:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS
        MAFRLGAC RATVAS FPQLNHNNFLI    RE+EI+RVRG RRLRIRVSDGGESYLGMWKNAVERQRK+IEFQKV+EN VGNDD NGGDRSA QLEKKS
Subjt:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS

Query:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMVAVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT
        EEFSKILQVP EERDRIQRMQVIHRAAAAIAAARAL+GETGMVAVGDSSS D NIS NLNSSN+GGLLDREE+   +Q  NT
Subjt:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMVAVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT

TrEMBL top hitse value%identityAlignment
A0A1S3BMD1 uncharacterized protein LOC1034912231.0e-5973.84Show/hide
Query:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS
        M FRLG  PR T+++HFP L H+NFL+    RE++I+   G R LRIR SDGGESYLGMWKNAVERQRK+IEFQKV+EN VGNDD N GD S+DQLEKKS
Subjt:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS

Query:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMVAVGDSSSHDLNISLNLNSSNNGGLLDREE
        EEFSKILQVP EERDRIQRMQVIHRAAAAIAAARAL+GETG +AVGDS +     S+NLNS+N+GGLLDREE
Subjt:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMVAVGDSSSHDLNISLNLNSSNNGGLLDREE

A0A5A7UQT1 Uncharacterized protein1.0e-5973.84Show/hide
Query:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS
        M FRLG  PR T+++HFP L H+NFL+    RE++I+   G R LRIR SDGGESYLGMWKNAVERQRK+IEFQKV+EN VGNDD N GD S+DQLEKKS
Subjt:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS

Query:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMVAVGDSSSHDLNISLNLNSSNNGGLLDREE
        EEFSKILQVP EERDRIQRMQVIHRAAAAIAAARAL+GETG +AVGDS +     S+NLNS+N+GGLLDREE
Subjt:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMVAVGDSSSHDLNISLNLNSSNNGGLLDREE

A0A6J1EV14 uncharacterized protein LOC1114368541.2e-6072.58Show/hide
Query:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS
        MAFRLGA PRATVASHFP LN  NFL+     +VEI+R  G RRLRIRVSDGGESYLGMWKNAV+RQRK IEFQKV+EN VGN D +GGD  ADQLEKKS
Subjt:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS

Query:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV----AVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT
        ++FSKILQVP EERDRIQRMQVIHRAAAAIAAARAL+GETG V    A  +SSS D ++S+NLN  N+GGLL+REED   +Q  NT
Subjt:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV----AVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT

A0A6J1KIG6 uncharacterized protein LOC1114947373.6e-6072.04Show/hide
Query:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS
        MAFRLGA PRATVASHFP LN  NFL+     + EI+R  G RRLRIRVSDGGESYLGMWKNAV+RQRK IEFQKV+EN VGN D +GGD  ADQLEKKS
Subjt:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS

Query:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV----AVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT
        ++FSKILQVP EERDRIQRMQVIHRAAAAIAAARAL+GETG V    A  +SSS D ++S+NLN  N+GGLL+REED   +Q  NT
Subjt:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMV----AVGDSSSHDLNISLNLNSSNNGGLLDREED--PYQYPNT

A0A6J1KWK6 uncharacterized protein LOC1114993671.8e-5973.08Show/hide
Query:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS
        MAFR G CPRAT  S+FPQLN  NFLI    REVEI+R RG RRLRIRVSDG ESYLGMWKNAVERQRK+IEF+KV+EN VGNDD N GDRS DQL +KS
Subjt:  MAFRLGACPRATVASHFPQLNHNNFLI----REVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKS

Query:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMVAVGDSSSHDLNISLNLNSSNNGGLLDREE--DPYQYPNT
        EEFSKILQVP +ERD+IQRMQVIHRA AAIAAARAL+GET +VA       D N SLNLNS N+GGLLDREE    +Q  NT
Subjt:  EEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALIGETGMVAVGDSSSHDLNISLNLNSSNNGGLLDREE--DPYQYPNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G55760.1 unknown protein5.6e-2157.73Show/hide
Query:  GARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKSEEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALI
        G R LR+  ++G ESYL MWKNAV+R++K   F+K+ EN V  D   G       LEKKS+EF KIL+V  EERDRIQRMQV+ RAAAAI+AARA++
Subjt:  GARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKSEEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALI

AT3G55760.2 unknown protein5.6e-2157.73Show/hide
Query:  GARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKSEEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALI
        G R LR+  ++G ESYL MWKNAV+R++K   F+K+ EN V  D   G       LEKKS+EF KIL+V  EERDRIQRMQV+ RAAAAI+AARA++
Subjt:  GARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKSEEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALI

AT3G55760.3 unknown protein5.6e-2157.73Show/hide
Query:  GARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKSEEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALI
        G R LR+  ++G ESYL MWKNAV+R++K   F+K+ EN V  D   G       LEKKS+EF KIL+V  EERDRIQRMQV+ RAAAAI+AARA++
Subjt:  GARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKSEEFSKILQVPAEERDRIQRMQVIHRAAAAIAAARALI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCGTTCCGATTAGGAGCTTGTCCACGCGCCACCGTCGCCTCTCATTTTCCCCAACTCAATCACAACAACTTTCTCATTCGAGAGGTTGAGATTCAGCGGGTGAG
AGGCGCGAGGAGACTGAGAATTAGGGTTTCGGATGGAGGAGAATCGTATCTCGGGATGTGGAAGAACGCGGTGGAGCGCCAGAGGAAATCTATTGAGTTTCAGAAAGTTA
TTGAGAATGCTGTTGGAAATGACGATCTCAATGGCGGTGATCGAAGTGCTGATCAGTTGGAGAAGAAGAGCGAGGAGTTCAGTAAGATTCTTCAGGTCCCGGCGGAGGAG
AGGGATCGGATTCAGCGGATGCAGGTCATTCATCGAGCTGCTGCCGCCATTGCAGCTGCTCGTGCACTTATTGGTGAGACTGGAATGGTAGCTGTGGGAGACTCGAGTTC
GCACGATTTGAATATTTCTCTGAATTTGAACAGTAGTAATAACGGTGGACTACTCGATCGTGAAGAAGATCCGTATCAATATCCTAATACAGGAAATAATGGCAGTGTCG
ACTAG
mRNA sequenceShow/hide mRNA sequence
TGACAGTACGCAAGGTGTCACCGTCCAAAATGTGACCAATAAAGAAATATTTATTTGAAAGAAAGGTGACCGACGGGTAACGGCATCACATCCTTTCTTCCAATTCAAGA
AACTTTCTTCCAATTCCCGAGGGTTTGGGAGTGTACACTATGTGGAGGGAAGAAAAATGGCGTCCACAAGATCAAATCACCACCCGAAATTGAATCATTGAGCTTATCCC
ATTTCCAATTTCATCACTGCAGTTCCGGTTTCAATGATGGCGTTCCGATTAGGAGCTTGTCCACGCGCCACCGTCGCCTCTCATTTTCCCCAACTCAATCACAACAACTT
TCTCATTCGAGAGGTTGAGATTCAGCGGGTGAGAGGCGCGAGGAGACTGAGAATTAGGGTTTCGGATGGAGGAGAATCGTATCTCGGGATGTGGAAGAACGCGGTGGAGC
GCCAGAGGAAATCTATTGAGTTTCAGAAAGTTATTGAGAATGCTGTTGGAAATGACGATCTCAATGGCGGTGATCGAAGTGCTGATCAGTTGGAGAAGAAGAGCGAGGAG
TTCAGTAAGATTCTTCAGGTCCCGGCGGAGGAGAGGGATCGGATTCAGCGGATGCAGGTCATTCATCGAGCTGCTGCCGCCATTGCAGCTGCTCGTGCACTTATTGGTGA
GACTGGAATGGTAGCTGTGGGAGACTCGAGTTCGCACGATTTGAATATTTCTCTGAATTTGAACAGTAGTAATAACGGTGGACTACTCGATCGTGAAGAAGATCCGTATC
AATATCCTAATACAGGAAATAATGGCAGTGTCGACTAG
Protein sequenceShow/hide protein sequence
MMAFRLGACPRATVASHFPQLNHNNFLIREVEIQRVRGARRLRIRVSDGGESYLGMWKNAVERQRKSIEFQKVIENAVGNDDLNGGDRSADQLEKKSEEFSKILQVPAEE
RDRIQRMQVIHRAAAAIAAARALIGETGMVAVGDSSSHDLNISLNLNSSNNGGLLDREEDPYQYPNTGNNGSVD