; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G012950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G012950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationchr09:20795732..20796613
RNA-Seq ExpressionLsi09G012950
SyntenyLsi09G012950
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593874.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4785.34Show/hide
Query:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEY
        MAVVLLHHHHN HRRR   TLFL A VLLLL SAIAARPTPI+  ET+   G EERVVTRRRLSGPGSSPPTCRSKCGSCTPCT VHVPI PGLSLPLEY
Subjt:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEY

Query:  YPEAWRCKCGNSLYMP
        YPEAWRCKCGNSLYMP
Subjt:  YPEAWRCKCGNSLYMP

XP_008449315.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]3.2e-4077.78Show/hide
Query:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPI-EETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLE
        MAV+LLH     H RR+ LTLFL    LLLL S+IAARPTPI EE E + PAGT ERV+TRRRL+GPGSSPPTCRSKCGSC PCT VHVPIQPGLSLPLE
Subjt:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPI-EETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLE

Query:  YYPEAWRCKCGNSLYMP
        YYPEAWRCKCGN+LYMP
Subjt:  YYPEAWRCKCGNSLYMP

XP_022930459.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita moschata]2.3e-4683.33Show/hide
Query:  MAVVLLHHHHNRHRRRSCLTLFLLAAV----LLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSL
        MAVVLLHHHHN HRRR   TLFL A V    LLLLASAIAARPTPI+  ET+   G EERVVTRRRLSGPGSSPPTCRSKCGSCTPCT VHVPI PGLSL
Subjt:  MAVVLLHHHHNRHRRRSCLTLFLLAAV----LLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSL

Query:  PLEYYPEAWRCKCGNSLYMP
        PLEYYPEAWRCKCGNSLYMP
Subjt:  PLEYYPEAWRCKCGNSLYMP

XP_023000566.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima]1.6e-4786.21Show/hide
Query:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEY
        MAVVLLHHHHN HRRR   TLFL  AV+LLLASAIAARPTPI+  ET+ P G EERVVTRRRLSGPGSSPPTCRSKCGSCTPCT VHVPI PGLSLPLEY
Subjt:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEY

Query:  YPEAWRCKCGNSLYMP
        YPEAWRCKCGNSLYMP
Subjt:  YPEAWRCKCGNSLYMP

XP_023513820.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo]2.9e-4987.07Show/hide
Query:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEY
        MAVVLLHHHHN HRRR   TLFL A VLLLLASAIAARPTPI+  ET+ P G EERVVTRRRLSGPGSSPPTCRSKCGSCTPCT VHVPI PGLSLPLEY
Subjt:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEY

Query:  YPEAWRCKCGNSLYMP
        YPEAWRCKCGNSLYMP
Subjt:  YPEAWRCKCGNSLYMP

TrEMBL top hitse value%identityAlignment
A0A0A0LKT0 Epidermal patterning factor-like protein3.0e-3672.88Show/hide
Query:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPI-EETETE-FPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPL
        MA++LL H    HRRR+ L+L L    LLLL S+IAARPTPI +E E +  P GT+E  +TRRRLSGPGSSPPTCRSKCGSC PCT VHVPIQPGLSLPL
Subjt:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPI-EETETE-FPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGN+LYMP
Subjt:  EYYPEAWRCKCGNSLYMP

A0A1S3BMN7 Epidermal patterning factor-like protein1.5e-4077.78Show/hide
Query:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPI-EETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLE
        MAV+LLH     H RR+ LTLFL    LLLL S+IAARPTPI EE E + PAGT ERV+TRRRL+GPGSSPPTCRSKCGSC PCT VHVPIQPGLSLPLE
Subjt:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPI-EETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLE

Query:  YYPEAWRCKCGNSLYMP
        YYPEAWRCKCGN+LYMP
Subjt:  YYPEAWRCKCGNSLYMP

A0A5A7UQS2 Epidermal patterning factor-like protein1.5e-4077.78Show/hide
Query:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPI-EETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLE
        MAV+LLH     H RR+ LTLFL    LLLL S+IAARPTPI EE E + PAGT ERV+TRRRL+GPGSSPPTCRSKCGSC PCT VHVPIQPGLSLPLE
Subjt:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPI-EETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLE

Query:  YYPEAWRCKCGNSLYMP
        YYPEAWRCKCGN+LYMP
Subjt:  YYPEAWRCKCGNSLYMP

A0A6J1ERG1 Epidermal patterning factor-like protein1.1e-4683.33Show/hide
Query:  MAVVLLHHHHNRHRRRSCLTLFLLAAV----LLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSL
        MAVVLLHHHHN HRRR   TLFL A V    LLLLASAIAARPTPI+  ET+   G EERVVTRRRLSGPGSSPPTCRSKCGSCTPCT VHVPI PGLSL
Subjt:  MAVVLLHHHHNRHRRRSCLTLFLLAAV----LLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSL

Query:  PLEYYPEAWRCKCGNSLYMP
        PLEYYPEAWRCKCGNSLYMP
Subjt:  PLEYYPEAWRCKCGNSLYMP

A0A6J1KG67 Epidermal patterning factor-like protein7.6e-4886.21Show/hide
Query:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEY
        MAVVLLHHHHN HRRR   TLFL  AV+LLLASAIAARPTPI+  ET+ P G EERVVTRRRLSGPGSSPPTCRSKCGSCTPCT VHVPI PGLSLPLEY
Subjt:  MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEY

Query:  YPEAWRCKCGNSLYMP
        YPEAWRCKCGNSLYMP
Subjt:  YPEAWRCKCGNSLYMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.3e-2073.68Show/hide
Query:  RRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP
        RR L G GSSPP C SKCG CTPC PVHVP+ PG  +  EYYPEAWRCKCGN LYMP
Subjt:  RRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 44.6e-2656.48Show/hide
Query:  RHRRRSCLTLFLLAAVLLLL--ASAIAARPTPI-EETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCK
        R RRR  L   +  A+L L   +S ++A    I + T ++ P G    + + +R  GPGSSPPTCRSKCG C PC PVHVPIQPGLS+PLEYYPEAWRCK
Subjt:  RHRRRSCLTLFLLAAVLLLL--ASAIAARPTPI-EETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCK

Query:  CGNSLYMP
        CGN L+MP
Subjt:  CGNSLYMP

Q7M1E7 Polygalacturonase7.4e-0844.9Show/hide
Query:  SSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP
        SSPP C++KC  C PC P  + + P  + P +YYP+ W C C N +Y P
Subjt:  SSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP

Q9FY19 Polygalacturonase9.7e-0844.9Show/hide
Query:  SSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP
        SSPP C++KC  C PC P  + + P  + P +YYP+ W C C N +Y P
Subjt:  SSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 56.2e-2352.48Show/hide
Query:  TLFLLAAVLLLLASAIAARPTP---IEETETEFP-AGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYM
        TL + A +L   +S+ A+   P   + + + E   +G   ++V ++RL GPGS PP CR KCG C PC  VHVPIQPGL +PLEYYPEAWRCKCGN L+M
Subjt:  TLFLLAAVLLLLASAIAARPTP---IEETETEFP-AGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYM

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related9.2e-2273.68Show/hide
Query:  RRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP
        RR L G GSSPP C SKCG CTPC PVHVP+ PG  +  EYYPEAWRCKCGN LYMP
Subjt:  RRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP

AT2G30370.2 allergen-related9.2e-2273.68Show/hide
Query:  RRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP
        RR L G GSSPP C SKCG CTPC PVHVP+ PG  +  EYYPEAWRCKCGN LYMP
Subjt:  RRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP

AT3G22820.1 allergen-related4.4e-2452.48Show/hide
Query:  TLFLLAAVLLLLASAIAARPTP---IEETETEFP-AGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYM
        TL + A +L   +S+ A+   P   + + + E   +G   ++V ++RL GPGS PP CR KCG C PC  VHVPIQPGL +PLEYYPEAWRCKCGN L+M
Subjt:  TLFLLAAVLLLLASAIAARPTP---IEETETEFP-AGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCGNSLYM

Query:  P
        P
Subjt:  P

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)3.3e-2756.48Show/hide
Query:  RHRRRSCLTLFLLAAVLLLL--ASAIAARPTPI-EETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCK
        R RRR  L   +  A+L L   +S ++A    I + T ++ P G    + + +R  GPGSSPPTCRSKCG C PC PVHVPIQPGLS+PLEYYPEAWRCK
Subjt:  RHRRRSCLTLFLLAAVLLLL--ASAIAARPTPI-EETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCK

Query:  CGNSLYMP
        CGN L+MP
Subjt:  CGNSLYMP

AT4G37810.1 unknown protein7.8e-0531.25Show/hide
Query:  SCLTLFLLAAVLLLLAS---AIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTC-RSKCGSCTPCTPVHVPIQPGLSL--PL------------
        S ++ FLL  +LL+L S   ++ A   P  ++     +G ++  +  R L   GS PP C R +C SC  C  + VP  P   L  PL            
Subjt:  SCLTLFLLAAVLLLLAS---AIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTC-RSKCGSCTPCTPVHVPIQPGLSL--PL------------

Query:  ----------EYYPEAWRCKCGNSLYMP
                   Y P +W+CKCGNS+Y P
Subjt:  ----------EYYPEAWRCKCGNSLYMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTAGTCCTCCTCCACCACCACCACAACCGCCACCGCCGCCGCAGCTGTCTAACCCTTTTTCTTCTAGCCGCAGTTCTCCTCCTCCTCGCCTCCGCCATTGCCGC
CCGCCCCACTCCCATCGAGGAAACAGAAACAGAGTTTCCAGCAGGAACAGAGGAGCGGGTTGTGACACGGCGGAGACTCAGCGGGCCAGGGTCGTCACCGCCGACTTGTA
GATCGAAGTGCGGCAGTTGCACGCCGTGTACGCCGGTGCACGTGCCAATTCAACCGGGACTGAGCTTGCCGTTGGAATACTACCCTGAAGCTTGGCGGTGCAAATGCGGC
AACTCCCTTTATATGCCATGA
mRNA sequenceShow/hide mRNA sequence
CACAAAAAGAAAAAAAAAAAAAAGAAAATAAATTTATATATGGATTGAGATATGACAGCTCTCTGTTTTTTCTCGTTTTCTGTTTCGATTTTATGACCTTACTCCACTTC
ACTTCCTCCTCCATTCCTGGCCGGCGATGGCCGTAGTCCTCCTCCACCACCACCACAACCGCCACCGCCGCCGCAGCTGTCTAACCCTTTTTCTTCTAGCCGCAGTTCTC
CTCCTCCTCGCCTCCGCCATTGCCGCCCGCCCCACTCCCATCGAGGAAACAGAAACAGAGTTTCCAGCAGGAACAGAGGAGCGGGTTGTGACACGGCGGAGACTCAGCGG
GCCAGGGTCGTCACCGCCGACTTGTAGATCGAAGTGCGGCAGTTGCACGCCGTGTACGCCGGTGCACGTGCCAATTCAACCGGGACTGAGCTTGCCGTTGGAATACTACC
CTGAAGCTTGGCGGTGCAAATGCGGCAACTCCCTTTATATGCCATGAAAATTTAGCAAAGTTCTGTGACATTAAACACTCTGTTTTTCTTTTTTTTCCCTTTCATCTTCT
TCTTCTTCTTCCTCTTTGTCAAATACATCTGCTCGATTGTTTTTGCCACTCGTAGTCACTTCAATGGAGATTTTTTTTCCTTTTTTTTCTCCTTATTTTTTAAAATGTCT
ATATGATATAGTGTCATCGGAACTCGAAATCCCTCATTGTTTTTTGTCTTGCTGCGTTGGGAAAGAAAGTTAAGGACTTTGGAAATACAATAGTTTTCATTTTTCC
Protein sequenceShow/hide protein sequence
MAVVLLHHHHNRHRRRSCLTLFLLAAVLLLLASAIAARPTPIEETETEFPAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTPVHVPIQPGLSLPLEYYPEAWRCKCG
NSLYMP