CuGenDBv2

Gene ID	Lsi09G013470
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	E3 ubiquitin-protein ligase RHF1A
Genome location	chr09:21426924..21430716
RNA-Seq Expression	Lsi09G013470
Synteny	Lsi09G013470
Gene Ontology terms	GO:0009561 - megagametogenesis (biological process) GO:0010498 - proteasomal protein catabolic process (biological process) GO:0016567 - protein ubiquitination (biological process) GO:0051726 - regulation of cell cycle (biological process) GO:0055046 - microgametogenesis (biological process) GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033417.1 E3 ubiquitin-protein ligase RHF1A [Cucumis melo var. makuwa]

6.1e-128

75.98

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +L+ SQRS+ECPICCQLL LKDPVGQELLAAMASERLLKSRSLSSAASTSL FHENFD DHDS HSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFG+
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL
        GPSQV SACP EVPMSPRFQDAT TSPNSDSPSPGSP+ SVGQTGI+KISPS                                                
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL

Query:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS
           VILLP  PSGSQQKT+QSEG+SF DSIKSKWSATS KYKESILRSTQGIKEKLLARNSSVK LS+GVKREVSAGIAGVARMIDRLDLT K N  S+S
Subjt:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS

Query:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD
        FFSC GGTSNSLKGKNVVQESA TDGSVKI+RI TGSPSQVSPTVP S+E SLAQRGD
Subjt:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

XP_004149264.1 E3 ubiquitin-protein ligase RHF1A [Cucumis sativus]

1.9e-129

75.98

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +L+ SQRS+ECPICCQLLVLKDPVGQELLAAMASERLLKSR LSSAASTSLHFHENFD DHDS HSDDSDFDDLIMQHLAAAASRARYV RRERQRHFG+
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL
        GPSQV+SACP EVPMSPRFQDAT TSPNSDSPSP SP+ SVG+TGI+KISPS                                                
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL

Query:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS
           VILLP  PSGSQQKT+QSEG+SF DSIKSKWSATS KYKESILRSTQGIKEKLLARNSSVK LS+GVKREVSAGIAGVARMIDRLDLT K N  S+S
Subjt:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS

Query:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD
        FFSCSGGTSNSLKGKNVVQESAVTDGSVKI+RI TGSPSQVSPTVPSS++ SLAQRGD
Subjt:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

XP_008458566.1 PREDICTED: E3 ubiquitin-protein ligase RHF1A [Cucumis melo]

6.1e-128

75.98

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +L+ SQRS+ECPICCQLL LKDPVGQELLAAMASERLLKSRSLSSAASTSL FHENFD DHDS HSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFG+
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL
        GPSQV SACP EVPMSPRFQDAT TSPNSDSPSPGSP+ SVGQTGI+KISPS                                                
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL

Query:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS
           VILLP  PSGSQQKT+QSEG+SF DSIKSKWSATS KYKESILRSTQGIKEKLLARNSSVK LS+GVKREVSAGIAGVARMIDRLDLT K N  S+S
Subjt:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS

Query:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD
        FFSC GGTSNSLKGKNVVQESA TDGSVKI+RI TGSPSQVSPTVP S+E SLAQRGD
Subjt:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

XP_023006440.1 E3 ubiquitin-protein ligase RHF1A isoform X1 [Cucurbita maxima]

1.7e-122

72.45

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +L+ SQRSNECPICCQLLVL+DPVGQELLAA+ASE+LLKSRSLSS ASTSL FHENFD+DHDS+HSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEV-----PMSPRFQDATPTSPNSDSPSPGSPLSV-GQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNM
        GPSQ  SACPEEV     P+SPRFQDAT +SPNSDSPSPGSPLS  G+TGISKISP                                            
Subjt:  GPSQVTSACPEEV-----PMSPRFQDATPTSPNSDSPSPGSPLSV-GQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNM

Query:  HQPSLSYRVILLPP-SGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNA
               RV+L    SGSQQKT+Q EG+SFPDSIKSKWSATS KYKESI RSTQGIKEKLLARNSSVK LSRGVKREVSAGIAGVARMIDRLDL+ K NA
Subjt:  HQPSLSYRVILLPP-SGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNA

Query:  ASISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD
        AS+SFFSCSGGTSNS+KGKNVV QES VTDGSVK DRI TGSPS VSPTVP S+  SLAQRG+
Subjt:  ASISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

XP_038906575.1 E3 ubiquitin-protein ligase RHF1A [Benincasa hispida]

6.3e-133

77.81

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +L+ SQRSNECPICCQLLVLKDPVGQELLAA+ASERLLK RSLSSAASTSL FHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL
        GPSQV SACPEEVPMSPRFQDAT  SPNSDSPSPGSPL SVGQTG SKIS S                                                
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL

Query:  SYRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASISFF
           VILLPPSGS QKT+QSEG+SFPDSIKSKWSATS KYKESILRSTQGIKEKLLARNSS+K LSRGVKREVSAGIAGVARMIDRLDLT K N  S+SFF
Subjt:  SYRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASISFF

Query:  SCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD
        S SGGTSNSLKGKNVVQESAVTDGSVKIDRI TGSPSQVSPTVP S+E SLAQRGD
Subjt:  SCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDQ6 RING-type domain-containing protein

9.2e-130

75.98

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +L+ SQRS+ECPICCQLLVLKDPVGQELLAAMASERLLKSR LSSAASTSLHFHENFD DHDS HSDDSDFDDLIMQHLAAAASRARYV RRERQRHFG+
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL
        GPSQV+SACP EVPMSPRFQDAT TSPNSDSPSP SP+ SVG+TGI+KISPS                                                
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL

Query:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS
           VILLP  PSGSQQKT+QSEG+SF DSIKSKWSATS KYKESILRSTQGIKEKLLARNSSVK LS+GVKREVSAGIAGVARMIDRLDLT K N  S+S
Subjt:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS

Query:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD
        FFSCSGGTSNSLKGKNVVQESAVTDGSVKI+RI TGSPSQVSPTVPSS++ SLAQRGD
Subjt:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

A0A1S3C9D8 E3 ubiquitin-protein ligase RHF1A

3.0e-128

75.98

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +L+ SQRS+ECPICCQLL LKDPVGQELLAAMASERLLKSRSLSSAASTSL FHENFD DHDS HSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFG+
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL
        GPSQV SACP EVPMSPRFQDAT TSPNSDSPSPGSP+ SVGQTGI+KISPS                                                
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL

Query:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS
           VILLP  PSGSQQKT+QSEG+SF DSIKSKWSATS KYKESILRSTQGIKEKLLARNSSVK LS+GVKREVSAGIAGVARMIDRLDLT K N  S+S
Subjt:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS

Query:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD
        FFSC GGTSNSLKGKNVVQESA TDGSVKI+RI TGSPSQVSPTVP S+E SLAQRGD
Subjt:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

A0A5A7SVT0 E3 ubiquitin-protein ligase RHF1A

3.0e-128

75.98

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +L+ SQRS+ECPICCQLL LKDPVGQELLAAMASERLLKSRSLSSAASTSL FHENFD DHDS HSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFG+
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL
        GPSQV SACP EVPMSPRFQDAT TSPNSDSPSPGSP+ SVGQTGI+KISPS                                                
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPL-SVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQPSL

Query:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS
           VILLP  PSGSQQKT+QSEG+SF DSIKSKWSATS KYKESILRSTQGIKEKLLARNSSVK LS+GVKREVSAGIAGVARMIDRLDLT K N  S+S
Subjt:  SYRVILLP--PSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAASIS

Query:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD
        FFSC GGTSNSLKGKNVVQESA TDGSVKI+RI TGSPSQVSPTVP S+E SLAQRGD
Subjt:  FFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

A0A6J1H5S5 E3 ubiquitin-protein ligase RHF1A isoform X1

1.6e-121

71.9

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +L+ SQRSNECPICCQLLVL+DPVGQELLAA+A+E+LLKSRSLSS ASTSL FHENFD+DHDS+ SDDSDFDDLIMQHLAAAASRARYVHRRERQR FGL
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEV-----PMSPRFQDATPTSPNSDSPSPGSPLSV-GQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNM
        GPSQ  SACPEEV     P+SPRFQDA+ +SPNSDSPSPGSPLS  G+TGISKISP                                            
Subjt:  GPSQVTSACPEEV-----PMSPRFQDATPTSPNSDSPSPGSPLSV-GQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNM

Query:  HQPSLSYRVILL-PPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNA
               RV+L    SGSQQKT+QSEG+SFPDSIKSKWSATS KYKESI RSTQGIKEKLLARNSSVK LSRGVKREVSAGIAGVARMIDRLDL+ K NA
Subjt:  HQPSLSYRVILL-PPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNA

Query:  ASISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD
        AS+SFFSCSGGTSNS+KGKNVV QES VTDGSVK DRI TGSPS VSPTVP S++ SLAQRGD
Subjt:  ASISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

A0A6J1L048 E3 ubiquitin-protein ligase RHF1A isoform X1

8.4e-123

72.45

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +L+ SQRSNECPICCQLLVL+DPVGQELLAA+ASE+LLKSRSLSS ASTSL FHENFD+DHDS+HSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEV-----PMSPRFQDATPTSPNSDSPSPGSPLSV-GQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNM
        GPSQ  SACPEEV     P+SPRFQDAT +SPNSDSPSPGSPLS  G+TGISKISP                                            
Subjt:  GPSQVTSACPEEV-----PMSPRFQDATPTSPNSDSPSPGSPLSV-GQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNM

Query:  HQPSLSYRVILLPP-SGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNA
               RV+L    SGSQQKT+Q EG+SFPDSIKSKWSATS KYKESI RSTQGIKEKLLARNSSVK LSRGVKREVSAGIAGVARMIDRLDL+ K NA
Subjt:  HQPSLSYRVILLPP-SGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNA

Query:  ASISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD
        AS+SFFSCSGGTSNS+KGKNVV QES VTDGSVK DRI TGSPS VSPTVP S+  SLAQRG+
Subjt:  ASISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

SwissProt top hits

e value

%identity

Alignment

Q4TU14 E3 ubiquitin-protein ligase RHF1A

3.4e-36

37.72

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        ++E SQRS ECPIC QL VL+DP  QELLAA+  ERLLK+R++SS++  S+H H + D   +   S  S FD+  ++HL  AA R   + RR+ Q    L
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  -GPSQVTSACPEEVPMSPRFQDATPTSPNSDS--PSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQP
           S  T+  P ++    R    +     + +  PSPGS      +G S I P++ ++ S +                                     P
Subjt:  -GPSQVTSACPEEVPMSPRFQDATPTSPNSDS--PSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQP

Query:  SLSYRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPK--GNAAS
          S       PS S Q     E  S P++IKSK +A S KYKESI +S QG+KEKLLARN+SVK LS+GV+RE++AGIAGVARMI+R+D + K  G +A 
Subjt:  SLSYRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPK--GNAAS

Query:  ISFFSC-SGGTSNSLKGKNVVQESAVTDGSVKID
        +S  +  + G + S KGK V   S   +   K +
Subjt:  ISFFSC-SGGTSNSLKGKNVVQESAVTDGSVKID

Q9ZT42 E3 ubiquitin-protein ligase RHF2A

1.1e-23

32.17

Show/hide

Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +LE  QRS++CP+C Q + LKDP  QELL A+  ER  +     +A         +F++ H     D+++ ++ I+QHLAAAA+  R  H   R+ H   
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQ--PS
          SQ             +F     + PN+ SP P  P+          SPS RD +  V           NL  +   + S Q+       S+  Q  PS
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQ--PS

Query:  LS---YRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAAS
         S    R +       Q +   SE  SF +S+KS+ +A ST+YKESI ++T+  K++L +RN+S+  L   VKREVSAGIA V+RM++RL+       ++
Subjt:  LS---YRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAAS

Query:  ISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS
         S    S      T+N         E +V +  VK +  +TGS S
Subjt:  ISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS

Arabidopsis top hits

e value

%identity

Alignment

AT4G14220.1 RING-H2 group F1A

2.4e-37

37.72

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Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        ++E SQRS ECPIC QL VL+DP  QELLAA+  ERLLK+R++SS++  S+H H + D   +   S  S FD+  ++HL  AA R   + RR+ Q    L
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  -GPSQVTSACPEEVPMSPRFQDATPTSPNSDS--PSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQP
           S  T+  P ++    R    +     + +  PSPGS      +G S I P++ ++ S +                                     P
Subjt:  -GPSQVTSACPEEVPMSPRFQDATPTSPNSDS--PSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQP

Query:  SLSYRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPK--GNAAS
          S       PS S Q     E  S P++IKSK +A S KYKESI +S QG+KEKLLARN+SVK LS+GV+RE++AGIAGVARMI+R+D + K  G +A 
Subjt:  SLSYRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPK--GNAAS

Query:  ISFFSC-SGGTSNSLKGKNVVQESAVTDGSVKID
        +S  +  + G + S KGK V   S   +   K +
Subjt:  ISFFSC-SGGTSNSLKGKNVVQESAVTDGSVKID

AT5G22000.1 RING-H2 group F2A

8.0e-25

32.17

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Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +LE  QRS++CP+C Q + LKDP  QELL A+  ER  +     +A         +F++ H     D+++ ++ I+QHLAAAA+  R  H   R+ H   
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQ--PS
          SQ             +F     + PN+ SP P  P+          SPS RD +  V           NL  +   + S Q+       S+  Q  PS
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQ--PS

Query:  LS---YRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAAS
         S    R +       Q +   SE  SF +S+KS+ +A ST+YKESI ++T+  K++L +RN+S+  L   VKREVSAGIA V+RM++RL+       ++
Subjt:  LS---YRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAAS

Query:  ISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS
         S    S      T+N         E +V +  VK +  +TGS S
Subjt:  ISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS

AT5G22000.2 RING-H2 group F2A

8.0e-25

32.17

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Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +LE  QRS++CP+C Q + LKDP  QELL A+  ER  +     +A         +F++ H     D+++ ++ I+QHLAAAA+  R  H   R+ H   
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQ--PS
          SQ             +F     + PN+ SP P  P+          SPS RD +  V           NL  +   + S Q+       S+  Q  PS
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQ--PS

Query:  LS---YRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAAS
         S    R +       Q +   SE  SF +S+KS+ +A ST+YKESI ++T+  K++L +RN+S+  L   VKREVSAGIA V+RM++RL+       ++
Subjt:  LS---YRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAAS

Query:  ISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS
         S    S      T+N         E +V +  VK +  +TGS S
Subjt:  ISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS

AT5G22000.3 RING-H2 group F2A

8.0e-25

32.17

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Query:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL
        +LE  QRS++CP+C Q + LKDP  QELL A+  ER  +     +A         +F++ H     D+++ ++ I+QHLAAAA+  R  H   R+ H   
Subjt:  LLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVHRRERQRHFGL

Query:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQ--PS
          SQ             +F     + PN+ SP P  P+          SPS RD +  V           NL  +   + S Q+       S+  Q  PS
Subjt:  GPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQASKQAKLSFVLLSNMHQ--PS

Query:  LS---YRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAAS
         S    R +       Q +   SE  SF +S+KS+ +A ST+YKESI ++T+  K++L +RN+S+  L   VKREVSAGIA V+RM++RL+       ++
Subjt:  LS---YRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKGNAAS

Query:  ISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS
         S    S      T+N         E +V +  VK +  +TGS S
Subjt:  ISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATGCTTTTGATGACGCTTGCTGTATTTGCCTCGACCCATTTACCTCCGATGATCCCGCCACTATTACCAGTTGCAAGCATGAATATCATCTCCAATGTATTCTTGAT
TGGTAGGCTTCTTGAAGAGTCTCAAAGAAGCAATGAATGCCCAATCTGTTGCCAGTTGCTAGTGTTGAAGGATCCTGTTGGCCAGGAGCTTCTAGCAGCCATGGCTAGTG
AAAGGCTTTTAAAGTCGAGAAGCTTGTCTTCTGCTGCTTCCACTTCTTTGCATTTCCACGAAAACTTTGATATTGATCACGACTCCGCTCACTCAGATGACTCTGACTTT
GATGACCTGATTATGCAGCATCTTGCTGCTGCAGCTAGCAGAGCTCGGTATGTTCATAGAAGGGAGAGGCAAAGACATTTTGGACTTGGGCCTTCACAAGTTACCTCTGC
ATGTCCAGAAGAGGTTCCAATGTCACCACGATTTCAAGATGCAACTCCAACTTCACCTAATAGTGATTCACCATCTCCCGGTTCCCCGTTGTCTGTTGGCCAAACTGGAA
TTAGTAAAATCTCGCCTAGTAACAGAGATAGTGCCTCGCTAGTATTCTATCAAGAAATTTTTTCTTCCCTTGATTGCAACCTTAAATTCTCAAGATTCCCTCAGGCTTCA
AAACAAGCAAAGCTTTCGTTTGTTTTACTGTCTAACATGCATCAACCTTCTTTGTCATATAGGGTTATATTGCTGCCACCGTCTGGTAGCCAACAGAAAACAGACCAATC
TGAGGGGATCTCTTTCCCAGATTCCATCAAATCCAAATGGTCTGCTACTTCTACAAAGTACAAGGAATCAATCTTGCGAAGCACTCAAGGTATTAAGGAGAAACTGCTTG
CTCGTAACAGCTCCGTGAAGGTGCTAAGCAGAGGAGTAAAGCGTGAAGTGAGTGCTGGGATTGCTGGCGTTGCTCGAATGATTGATCGCCTAGATTTGACTCCAAAAGGG
AATGCTGCTTCTATTTCCTTCTTCAGCTGCAGTGGGGGTACATCAAACTCCTTGAAAGGAAAGAACGTTGTGCAAGAGAGTGCTGTCACTGATGGTTCAGTTAAAATTGA
TAGAATATCTACTGGTTCACCTTCACAGGTTTCCCCTACCGTTCCAAGCTCCATTGAAGCTTCTTTAGCTCAGAGAGGAGATTGA

mRNA sequence

Show/hide mRNA sequence

GGAAAAGGGAGTTTTTTGAGAGCAGACTGGTTCCACTTCCACCAAACCGTATGAATCGGTTTGTTTGCTGCAAAGTTCTTCAGATTTTTCCTCGTCTCCCAATAACTCTC
TTCTTTGACCATTCTCTCTCTTTCTTTCTCTACACATTTCTAGGTTTCTGTTTTCCCCAATTCCCTCTTCTAAAATCCTTCCTTCCTTCCTTCTCCCCTTTGATTTTGTC
TGCACTCCATGGCCAATTTCCCTTCTTCTTCCTCTCAGATTCCCAAAGCTCTTTCAGCTTCTGCTGCTTCCGATGATGCTTTTGATGACGCTTGCTGTATTTGCCTCGAC
CCATTTACCTCCGATGATCCCGCCACTATTACCAGTTGCAAGCATGAATATCATCTCCAATGTATTCTTGATTGGTAGGCTTCTTGAAGAGTCTCAAAGAAGCAATGAAT
GCCCAATCTGTTGCCAGTTGCTAGTGTTGAAGGATCCTGTTGGCCAGGAGCTTCTAGCAGCCATGGCTAGTGAAAGGCTTTTAAAGTCGAGAAGCTTGTCTTCTGCTGCT
TCCACTTCTTTGCATTTCCACGAAAACTTTGATATTGATCACGACTCCGCTCACTCAGATGACTCTGACTTTGATGACCTGATTATGCAGCATCTTGCTGCTGCAGCTAG
CAGAGCTCGGTATGTTCATAGAAGGGAGAGGCAAAGACATTTTGGACTTGGGCCTTCACAAGTTACCTCTGCATGTCCAGAAGAGGTTCCAATGTCACCACGATTTCAAG
ATGCAACTCCAACTTCACCTAATAGTGATTCACCATCTCCCGGTTCCCCGTTGTCTGTTGGCCAAACTGGAATTAGTAAAATCTCGCCTAGTAACAGAGATAGTGCCTCG
CTAGTATTCTATCAAGAAATTTTTTCTTCCCTTGATTGCAACCTTAAATTCTCAAGATTCCCTCAGGCTTCAAAACAAGCAAAGCTTTCGTTTGTTTTACTGTCTAACAT
GCATCAACCTTCTTTGTCATATAGGGTTATATTGCTGCCACCGTCTGGTAGCCAACAGAAAACAGACCAATCTGAGGGGATCTCTTTCCCAGATTCCATCAAATCCAAAT
GGTCTGCTACTTCTACAAAGTACAAGGAATCAATCTTGCGAAGCACTCAAGGTATTAAGGAGAAACTGCTTGCTCGTAACAGCTCCGTGAAGGTGCTAAGCAGAGGAGTA
AAGCGTGAAGTGAGTGCTGGGATTGCTGGCGTTGCTCGAATGATTGATCGCCTAGATTTGACTCCAAAAGGGAATGCTGCTTCTATTTCCTTCTTCAGCTGCAGTGGGGG
TACATCAAACTCCTTGAAAGGAAAGAACGTTGTGCAAGAGAGTGCTGTCACTGATGGTTCAGTTAAAATTGATAGAATATCTACTGGTTCACCTTCACAGGTTTCCCCTA
CCGTTCCAAGCTCCATTGAAGCTTCTTTAGCTCAGAGAGGAGATTGAAGTGTGGATGTTAGGATTTGATTCATCTAGTTGAACATCTTATCAACTCAACTCAATAGAATG
CACACTGCGGCAAGCGACGTGTTACGATTTAGCCAACATCCTTGTTGGTTTGCGTCCTGCGTTTTCATCTTCTTCTTTTTATAAATCTACTAATGAAAAAAGGTGTAATT
TTCGTAGTAATTCTCTATATAATATATTTTATGTAATGATGTTGATCTGCTTCATGATACTCTATTTCTATGTGGATGAGTTTCTTTCTATCTCTTTGAGATTGGGACTG
AAGTTTTCATTATCAATGGAAGCTTTGACTGAATGGAGGCAACTCATTGGGATACAAATGCTTCTTTTGAAGCGAAGAACATAAAAAGGAAGCCAACCTAAGTGTAATGC
CAAGGGGAATTTGGGTTAGGGGTGGAAGTTGAGATTGTAAATCTCTATCAAACCTACCAAACTACATTGGTTGAATTTTATTTCATTTATTTATTTGTTTTTTATCAGCC
ATTAAATTAACATGTAGGGCCTTGAAGATGTTTTTTCACAACTTAATTCCCTTGCCAATTTTGCAA

Protein sequence

Show/hide protein sequence

MMLLMTLAVFASTHLPPMIPPLLPVASMNIISNVFLIGRLLEESQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLHFHENFDIDHDSAHSDDSDF
DDLIMQHLAAAASRARYVHRRERQRHFGLGPSQVTSACPEEVPMSPRFQDATPTSPNSDSPSPGSPLSVGQTGISKISPSNRDSASLVFYQEIFSSLDCNLKFSRFPQAS
KQAKLSFVLLSNMHQPSLSYRVILLPPSGSQQKTDQSEGISFPDSIKSKWSATSTKYKESILRSTQGIKEKLLARNSSVKVLSRGVKREVSAGIAGVARMIDRLDLTPKG
NAASISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPSSIEASLAQRGD

Lsi09G013470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome