CuGenDBv2

Gene ID	Lsi09G013490
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr09:21439086..21440267
RNA-Seq Expression	Lsi09G013490
Synteny	Lsi09G013490
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593910.1 hypothetical protein SDJN03_13386, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-40

80.73

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Query:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS
        ME  V +DDLLFAELTRRISLLIMDDDELP VHTDL+RT++++RP +LPL+VDYEN  VRESKGTGVFIPTRLP PKRK RN  GYRIKSENKRLN QPS
Subjt:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS

Query:  STYYCKPKK
        STYY KPKK
Subjt:  STYYCKPKK

XP_004149266.1 uncharacterized protein LOC101220151 [Cucumis sativus]

3.5e-41

82.57

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Query:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGT-GYRIKSENKRLNHQP
        ME+ VE+DDLLFAELTRRISLLIMDDDELPI HT+ TRTV+QLRPR+LPL++DYEN  VRESKGTGVFIP RLPP KRKQ+N T GYRIKSENKRLN QP
Subjt:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGT-GYRIKSENKRLNHQP

Query:  SSTYYCKPK
        S TYYCKPK
Subjt:  SSTYYCKPK

XP_022930457.1 uncharacterized protein LOC111436898 [Cucurbita moschata]

7.9e-41

81.65

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Query:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS
        ME  V +DDLLFAELTRRISLLIMDDDELP VHTDL+RT++++RP QLPL+VDYEN  VRESKGTGVFIPTRLP PKRK RN  GYRIKSENKRLN QPS
Subjt:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS

Query:  STYYCKPKK
        STYY KPKK
Subjt:  STYYCKPKK

XP_023521928.1 uncharacterized protein LOC111785772 [Cucurbita pepo subsp. pepo]

1.3e-40

80.73

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Query:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS
        ME  V++DDLLFAELTRRISLLIMDDDE P VHTDL+RT++++RP QLPL+VDYEN  VRESKGTGVFIPTRLP PKRK RN  GYRIKSENKRLN QPS
Subjt:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS

Query:  STYYCKPKK
        STYY KPKK
Subjt:  STYYCKPKK

XP_038875510.1 uncharacterized protein LOC120067937 [Benincasa hispida]

1.7e-43

81.82

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Query:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS
        ME+GVENDDLLFAELTRRISLLIMDDDELPIVHTD TRTV+QLRPRQ PL++DYEN  +RESKGTGVFIP RLPPPKRKQR+  GYRIK++NK L+HQPS
Subjt:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS

Query:  STYYCKPKKG
        S YY +PKKG
Subjt:  STYYCKPKKG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KGT1 Uncharacterized protein

1.7e-41

82.57

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Query:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGT-GYRIKSENKRLNHQP
        ME+ VE+DDLLFAELTRRISLLIMDDDELPI HT+ TRTV+QLRPR+LPL++DYEN  VRESKGTGVFIP RLPP KRKQ+N T GYRIKSENKRLN QP
Subjt:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGT-GYRIKSENKRLNHQP

Query:  SSTYYCKPK
        S TYYCKPK
Subjt:  SSTYYCKPK

A0A1S3C8R0 uncharacterized protein LOC103497931

2.5e-40

84.11

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Query:  VENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGT-GYRIKSENKRLNH--QPSS
        VENDDLLFAELTRRISLLIMDDDELPIV+T+ TRTV+QLRPR+LPL +DYEN  VRESKGTGVFIPTRLPPPKRKQ+N T GYRIKSENKRLN+  QPS 
Subjt:  VENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGT-GYRIKSENKRLNH--QPSS

Query:  TYYCKPK
         YYCKPK
Subjt:  TYYCKPK

A0A5A7SW60 Uncharacterized protein

2.5e-40

84.11

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Query:  VENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGT-GYRIKSENKRLNH--QPSS
        VENDDLLFAELTRRISLLIMDDDELPIV+T+ TRTV+QLRPR+LPL +DYEN  VRESKGTGVFIPTRLPPPKRKQ+N T GYRIKSENKRLN+  QPS 
Subjt:  VENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGT-GYRIKSENKRLNH--QPSS

Query:  TYYCKPK
         YYCKPK
Subjt:  TYYCKPK

A0A6J1EQJ8 uncharacterized protein LOC111436898

3.8e-41

81.65

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Query:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS
        ME  V +DDLLFAELTRRISLLIMDDDELP VHTDL+RT++++RP QLPL+VDYEN  VRESKGTGVFIPTRLP PKRK RN  GYRIKSENKRLN QPS
Subjt:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS

Query:  STYYCKPKK
        STYY KPKK
Subjt:  STYYCKPKK

A0A6J1KEC6 uncharacterized protein LOC111494227

2.1e-39

78.9

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Query:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS
        ME  V++DDLLFAELTRRISLLIMDDDELP VHTDL+RT++++RP QLPL+VDY+N  VRESKGTGVFIPTRLP PKRK RN  GYRIKS N RLN QPS
Subjt:  MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPS

Query:  STYYCKPKK
        STYY KPKK
Subjt:  STYYCKPKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06070.1 unknown protein

1.7e-04

33.33

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Query:  NDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQL-----RPRQLPLLVDYEN---DLVRESKGTGVFIPTRLPPPKRKQRN
        +DD+ FA+++++++LLI D+DE   +    + +   L     +    P ++  E    +++RESKGTGVFIP R   P+RK  +
Subjt:  NDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQL-----RPRQLPLLVDYEN---DLVRESKGTGVFIPTRLPPPKRKQRN

AT5G19190.1 unknown protein

1.3e-04

33.33

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Query:  NDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQL--------PLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNH
        +DD+ FA+++++ISLLIMD+DE  +    L+ + + L  + L        P +   E     +SKGTGVFIP    P +R   +    R  S N +  H
Subjt:  NDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQL--------PLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNH

Sequences

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CDS sequence

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ATGGAAATTGGAGTAGAAAATGATGATTTGTTGTTTGCAGAGCTTACTAGAAGGATTTCGCTTCTCATTATGGACGACGATGAGCTTCCGATCGTTCATACGGACTTAAC
TAGAACAGTAAACCAACTTCGACCCAGGCAATTACCATTACTGGTGGATTACGAGAACGATTTAGTAAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCAACGCGGTTAC
CACCGCCTAAGAGGAAGCAAAGAAATGGCACCGGCTATAGAATCAAATCAGAAAACAAGAGGCTCAATCATCAACCCTCTTCAACTTATTATTGTAAGCCCAAGAAAGGC
TGA

mRNA sequence

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ACTTCCCTTTTCCTCTTCTTTTTGGCTTTGTTTTAGCCTTTGAGATGGAAATTGGAGTAGAAAATGATGATTTGTTGTTTGCAGAGCTTACTAGAAGGATTTCGCTTCTC
ATTATGGACGACGATGAGCTTCCGATCGTTCATACGGACTTAACTAGAACAGTAAACCAACTTCGACCCAGGCAATTACCATTACTGGTGGATTACGAGAACGATTTAGT
AAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCAACGCGGTTACCACCGCCTAAGAGGAAGCAAAGAAATGGCACCGGCTATAGAATCAAATCAGAAAACAAGAGGCTCA
ATCATCAACCCTCTTCAACTTATTATTGTAAGCCCAAGAAAGGCTGAGCTCATAAATGATCTATAATCTCTAATTATTTTAAGTTGTAGTTCTATATTAATATTTAATTA
TTTAATAAAATCGTGTGTGATAGTGATATGTTGGTAACATCACTTATGAAATAAAGCTACATAGAATTTTAGATTGTCTATTTCTTTTTCATGAATGAATAAAAGATGAT
AAAAGATTTAGATCTATTAATGTTTTTTAAAAGTTA

Protein sequence

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MEIGVENDDLLFAELTRRISLLIMDDDELPIVHTDLTRTVNQLRPRQLPLLVDYENDLVRESKGTGVFIPTRLPPPKRKQRNGTGYRIKSENKRLNHQPSSTYYCKPKKG

Lsi09G013490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome