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Lsi09G013600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G013600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionserine incorporator 3
Genome locationchr09:21627042..21627308
RNA-Seq ExpressionLsi09G013600
SyntenyLsi09G013600
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005016 - Serine incorporator/TMS membrane protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150322.1 serine incorporator 3 [Cucumis sativus]4.3e-2194.83Show/hide
Query:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
        MSCLFSCCASLTCGLCSSVAAGIS+SSARLAYCGLFGVSLVVSWILREFGAP+MEK+P
Subjt:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
XP_008458551.1 PREDICTED: serine incorporator 3 [Cucumis melo]2.5e-2196.55Show/hide
Query:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
        MSCLFSCCASLTCGLCSSVAAGIS+SSARLAYCGLFGVSLVVSWILREFGAPLMEK+P
Subjt:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
XP_022959416.1 serine incorporator 3 [Cucurbita moschata]1.8e-1991.23Show/hide
Query:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKI
        MSCLFSCCASLTCGLCSSVA+GIS+SSARLAYCGLFG+SLV SWILREFGAPLMEK+
Subjt:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKI
XP_023548171.1 serine incorporator 3 [Cucurbita pepo subsp. pepo]1.4e-1992.98Show/hide
Query:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKI
        MSCLFSCCASLTCGLCSSVA+GIS+SSARLAYCGLFGVSLV SWILREFGAPLMEK+
Subjt:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKI
XP_038906601.1 serine incorporator 3 [Benincasa hispida]2.5e-2196.55Show/hide
Query:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
        MSCLFSCCASLTCGLCSSVAAGIS+SSARLAYCGLFGVSLVVSWILREFGAPLMEK+P
Subjt:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
TrEMBL top hitse value%identityAlignment
A0A0A0KCI8 Uncharacterized protein2.1e-2194.83Show/hide
Query:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
        MSCLFSCCASLTCGLCSSVAAGIS+SSARLAYCGLFGVSLVVSWILREFGAP+MEK+P
Subjt:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
A0A1S3C9C5 serine incorporator 31.2e-2196.55Show/hide
Query:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
        MSCLFSCCASLTCGLCSSVAAGIS+SSARLAYCGLFGVSLVVSWILREFGAPLMEK+P
Subjt:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
A0A5A7SW70 Serine incorporator 31.2e-2196.55Show/hide
Query:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
        MSCLFSCCASLTCGLCSSVAAGIS+SSARLAYCGLFGVSLVVSWILREFGAPLMEK+P
Subjt:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
A0A6J1H4T3 serine incorporator 38.7e-2091.23Show/hide
Query:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKI
        MSCLFSCCASLTCGLCSSVA+GIS+SSARLAYCGLFG+SLV SWILREFGAPLMEK+
Subjt:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKI
A0A6J1L1J4 serine incorporator 38.7e-2091.23Show/hide
Query:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKI
        MSCLFSCCASLTCGLCSSVA+GIS+SSARLAYCGLFG+SLV SWILREFGAPLMEK+
Subjt:  MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16180.1 Serinc-domain containing serine and sphingolipid biosynthesis protein7.5e-1666.67Show/hide
Query:  SCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
        SCL SCCA+  C  C +V +GIS+ SAR+AYCGLF +SL+VSWILRE  APLMEK+P
Subjt:  SCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
AT1G16180.2 Serinc-domain containing serine and sphingolipid biosynthesis protein7.5e-1666.67Show/hide
Query:  SCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
        SCL SCCA+  C  C +V +GIS+ SAR+AYCGLF +SL+VSWILRE  APLMEK+P
Subjt:  SCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
AT3G06170.1 Serinc-domain containing serine and sphingolipid biosynthesis protein2.9e-2082.14Show/hide
Query:  CLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP
        CL SCCAS TCGLCSSVA+GIS+ SAR+AYCGLFG SLVVSWILRE GAPL+EK+P
Subjt:  CLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTGCTTGTTTTCATGCTGTGCATCTCTCACGTGCGGTCTCTGCTCCTCCGTCGCCGCCGGCATCTCCAAAAGCTCCGCTAGACTTGCTTACTGTGGCCTTTTCGG
CGTCTCCTTGGTCGTTTCATGGATTCTCAGAGAGTTTGGAGCTCCTCTGATGGAGAAGATTCCATGTGAGTTTCATCACTTGCTTGAATTTTCGTTATTCTACCTGATTT
CAATTGTTTGCTCGTATCTTCGATTTTGTTTTTCTTTAGCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTGCTTGTTTTCATGCTGTGCATCTCTCACGTGCGGTCTCTGCTCCTCCGTCGCCGCCGGCATCTCCAAAAGCTCCGCTAGACTTGCTTACTGTGGCCTTTTCGG
CGTCTCCTTGGTCGTTTCATGGATTCTCAGAGAGTTTGGAGCTCCTCTGATGGAGAAGATTCCATGTGAGTTTCATCACTTGCTTGAATTTTCGTTATTCTACCTGATTT
CAATTGTTTGCTCGTATCTTCGATTTTGTTTTTCTTTAGCTTCTTGA
Protein sequenceShow/hide protein sequence
MSCLFSCCASLTCGLCSSVAAGISKSSARLAYCGLFGVSLVVSWILREFGAPLMEKIPCEFHHLLEFSLFYLISIVCSYLRFCFSLAS