; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G013870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G013870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:21894879..21895277
RNA-Seq ExpressionLsi09G013870
SyntenyLsi09G013870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033453.1 hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa]2.5e-4982.73Show/hide
Query:  MDQIKDASSFFLWEDSADSEVDRLLSNPHELESAV--DDQDDACSCSC--NDFTNDDLRALDFQDD---GDADGDQAVGLIGDGGRRRSGAALEYGYEEE
        MDQIKDASSFFLWEDSADSEVD+LLS+PHELESAV  DDQ+DACSCSC  NDF+ DDLRALDFQDD   GD D DQ + LIGDGGRRRSGAAL+YGY   
Subjt:  MDQIKDASSFFLWEDSADSEVDRLLSNPHELESAV--DDQDDACSCSC--NDFTNDDLRALDFQDD---GDADGDQAVGLIGDGGRRRSGAALEYGYEEE

Query:  EEEEEEEEEESSNDVAVIRNMDEMEDKLFWDTCMAGGYP
        EEEEEEEEEESS+DV VIRNM+EMEDKLFWDTCMAGGYP
Subjt:  EEEEEEEEEESSNDVAVIRNMDEMEDKLFWDTCMAGGYP

KAE8646684.1 hypothetical protein Csa_005604 [Cucumis sativus]2.3e-3172.58Show/hide
Query:  SADSEVDRLLSN-PHELESAV---DDQDDACSCSCNDFTNDDLRALDFQD--DGD-ADGDQAVGLIGDGGRRRSGAALEYGYEEEEEEEEEEEEESSNDV
        SADSEVD+LLS+ PH+LESAV   DDQ+DACSCSCN   N+D    DFQD  DGD  DGDQ +GLIGDGGRRRSGA    GY  EEEEEEEEEE S+NDV
Subjt:  SADSEVDRLLSN-PHELESAV---DDQDDACSCSCNDFTNDDLRALDFQD--DGD-ADGDQAVGLIGDGGRRRSGAALEYGYEEEEEEEEEEEEESSNDV

Query:  AVIRNMDEMEDKLFWDTCMAGGYP
          IRNM+EMEDK+FWDTCMAGGYP
Subjt:  AVIRNMDEMEDKLFWDTCMAGGYP

KAF5738669.1 hypothetical protein HS088_TW13G01570 [Tripterygium wilfordii]2.0e-0642.86Show/hide
Query:  QIKDASSFFLWEDSADSEVDRLLSNPHELESAVDDQDDACSCSCNDFTNDDLRALDFQDDGDADGDQAVGLIGD--GGRRRSGAALEYGYEEEEEEEEEE
        ++ D SSF L E SADSE+D    +        DD DDA SCSC      D   LDF DD     D+ + + GD       +    + G E    EE EE
Subjt:  QIKDASSFFLWEDSADSEVDRLLSNPHELESAVDDQDDACSCSCNDFTNDDLRALDFQDDGDADGDQAVGLIGD--GGRRRSGAALEYGYEEEEEEEEEE

Query:  EEESSNDVAVIRN-MDEMEDKLFWDTCMAGGYP
        EEE S D+   R   DEMEDKLFW+TCM  GYP
Subjt:  EEESSNDVAVIRN-MDEMEDKLFWDTCMAGGYP

KAG6575041.1 hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3463.97Show/hide
Query:  IKDASSFFLWEDSADSEVDRLLSNPHELESAVDDQDDACSCSCNDFTNDDLRALDFQDDGDADGDQAVGLIGDGGR-------RRSGAALEYGYEEEEEE
        + +ASS FLWED+ADSEVDRLLS+PH+LESAVDD +DA SCSC+D+   D  A+D QDDGD D D+AVG  GD  R       R SGA LEY      EE
Subjt:  IKDASSFFLWEDSADSEVDRLLSNPHELESAVDDQDDACSCSCNDFTNDDLRALDFQDDGDADGDQAVGLIGDGGR-------RRSGAALEYGYEEEEEE

Query:  EEEEEEESSNDVAVIRNMDEMEDKLFWDTCMAGGYP
        +EEEEEES+N+V  IR+M+EMEDKLFWDTCM GGYP
Subjt:  EEEEEEESSNDVAVIRNMDEMEDKLFWDTCMAGGYP

KDO74975.1 hypothetical protein CISIN_1g032474mg [Citrus sinensis]5.8e-0637.32Show/hide
Query:  DASSFFLWEDSADSEVDRLLSNP--HELESAVDDQDDACSCSCNDFT--------NDDLRALDFQDDGDADGDQAVGLIGDGGRRRSGAALEYGYEEEEE
        D SSF L E+SADSEVD L       +   A  D+DDA SCSC+           + +L+  +F DDGD         I      +   A         +
Subjt:  DASSFFLWEDSADSEVDRLLSNP--HELESAVDDQDDACSCSCNDFT--------NDDLRALDFQDDGDADGDQAVGLIGDGGRRRSGAALEYGYEEEEE

Query:  EEEEEEEESSNDVAVIRNM-----DEMEDKLFWDTCMAGGYP
          ++EEE SS D+ +  N+     DEMED+LFW+TCMA GYP
Subjt:  EEEEEEEESSNDVAVIRNM-----DEMEDKLFWDTCMAGGYP

TrEMBL top hitse value%identityAlignment
A0A067G8N3 Uncharacterized protein2.8e-0637.32Show/hide
Query:  DASSFFLWEDSADSEVDRLLSNP--HELESAVDDQDDACSCSCNDFT--------NDDLRALDFQDDGDADGDQAVGLIGDGGRRRSGAALEYGYEEEEE
        D SSF L E+SADSEVD L       +   A  D+DDA SCSC+           + +L+  +F DDGD         I      +   A         +
Subjt:  DASSFFLWEDSADSEVDRLLSNP--HELESAVDDQDDACSCSCNDFT--------NDDLRALDFQDDGDADGDQAVGLIGDGGRRRSGAALEYGYEEEEE

Query:  EEEEEEEESSNDVAVIRNM-----DEMEDKLFWDTCMAGGYP
          ++EEE SS D+ +  N+     DEMED+LFW+TCMA GYP
Subjt:  EEEEEEEESSNDVAVIRNM-----DEMEDKLFWDTCMAGGYP

A0A0A0KBF3 Uncharacterized protein7.8e-4175.54Show/hide
Query:  MDQIKDASSFFLWEDSADSEVDRLLSN-PHELESAV---DDQDDACSCSCNDFTNDDLRALDFQD--DGD-ADGDQAVGLIGDGGRRRSGAALEYGYEEE
        MDQIKDASSFFLWEDSADSEVD+LLS+ PH+LESAV   DDQ+DACSCSCN   N+D    DFQD  DGD  DGDQ +GLIGDGGRRRSGA    GY  E
Subjt:  MDQIKDASSFFLWEDSADSEVDRLLSN-PHELESAV---DDQDDACSCSCNDFTNDDLRALDFQD--DGD-ADGDQAVGLIGDGGRRRSGAALEYGYEEE

Query:  EEEEEEEEEESSNDVAVIRNMDEMEDKLFWDTCMAGGYP
        EEEEEEEEE S+NDV  IRNM+EMEDK+FWDTCMAGGYP
Subjt:  EEEEEEEEEESSNDVAVIRNMDEMEDKLFWDTCMAGGYP

A0A5A7SSL9 Uncharacterized protein1.2e-4982.73Show/hide
Query:  MDQIKDASSFFLWEDSADSEVDRLLSNPHELESAV--DDQDDACSCSC--NDFTNDDLRALDFQDD---GDADGDQAVGLIGDGGRRRSGAALEYGYEEE
        MDQIKDASSFFLWEDSADSEVD+LLS+PHELESAV  DDQ+DACSCSC  NDF+ DDLRALDFQDD   GD D DQ + LIGDGGRRRSGAAL+YGY   
Subjt:  MDQIKDASSFFLWEDSADSEVDRLLSNPHELESAV--DDQDDACSCSC--NDFTNDDLRALDFQDD---GDADGDQAVGLIGDGGRRRSGAALEYGYEEE

Query:  EEEEEEEEEESSNDVAVIRNMDEMEDKLFWDTCMAGGYP
        EEEEEEEEEESS+DV VIRNM+EMEDKLFWDTCMAGGYP
Subjt:  EEEEEEEEEESSNDVAVIRNMDEMEDKLFWDTCMAGGYP

A0A5E4EN68 PREDICTED: LOC1106016474.8e-0637.96Show/hide
Query:  DASSFFLWEDSADSEVDR-----LLSNPHELESAVDDQDDACSCSCNDFTNDDLRALDFQDDGDADGDQAVGLIGDGGRRRSGAALEYGYEEEE----EE
        D S FFLWEDSADSE D         N  ++E A+ + +DA SCS    ++    A +  D    + ++         R++S  + + G + +     EE
Subjt:  DASSFFLWEDSADSEVDR-----LLSNPHELESAVDDQDDACSCSCNDFTNDDLRALDFQDDGDADGDQAVGLIGDGGRRRSGAALEYGYEEEE----EE

Query:  EEEEEEESSNDVAVIRNMDEM-EDKLFWDTCMAGGYP
        +EEEE ES     V ++MDEM ED+LFW+TCMA GYP
Subjt:  EEEEEEESSNDVAVIRNMDEM-EDKLFWDTCMAGGYP

A0A7J7CXK2 Uncharacterized protein9.7e-0742.86Show/hide
Query:  QIKDASSFFLWEDSADSEVDRLLSNPHELESAVDDQDDACSCSCNDFTNDDLRALDFQDDGDADGDQAVGLIGD--GGRRRSGAALEYGYEEEEEEEEEE
        ++ D SSF L E SADSE+D    +        DD DDA SCSC      D   LDF DD     D+ + + GD       +    + G E    EE EE
Subjt:  QIKDASSFFLWEDSADSEVDRLLSNPHELESAVDDQDDACSCSCNDFTNDDLRALDFQDDGDADGDQAVGLIGD--GGRRRSGAALEYGYEEEEEEEEEE

Query:  EEESSNDVAVIRN-MDEMEDKLFWDTCMAGGYP
        EEE S D+   R   DEMEDKLFW+TCM  GYP
Subjt:  EEESSNDVAVIRN-MDEMEDKLFWDTCMAGGYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTGGATAGATTATTGTCTAATCCTCATGAATTGGAATCTGCTGTGGATGA
TCAGGACGATGCTTGCTCCTGCAGCTGCAATGATTTTACTAATGATGATCTCAGAGCCCTTGATTTCCAAGATGATGGGGATGCCGATGGAGATCAAGCCGTTGGTTTGA
TTGGTGACGGTGGAAGGCGGCGAAGCGGGGCAGCGTTGGAGTACGGTTACGAGGAGGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGTCGAGTAATGATGTGGCCGTG
ATTCGTAATATGGATGAAATGGAAGATAAGCTCTTTTGGGACACTTGTATGGCAGGAGGGTATCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTGGATAGATTATTGTCTAATCCTCATGAATTGGAATCTGCTGTGGATGA
TCAGGACGATGCTTGCTCCTGCAGCTGCAATGATTTTACTAATGATGATCTCAGAGCCCTTGATTTCCAAGATGATGGGGATGCCGATGGAGATCAAGCCGTTGGTTTGA
TTGGTGACGGTGGAAGGCGGCGAAGCGGGGCAGCGTTGGAGTACGGTTACGAGGAGGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGTCGAGTAATGATGTGGCCGTG
ATTCGTAATATGGATGAAATGGAAGATAAGCTCTTTTGGGACACTTGTATGGCAGGAGGGTATCCCTGA
Protein sequenceShow/hide protein sequence
MDQIKDASSFFLWEDSADSEVDRLLSNPHELESAVDDQDDACSCSCNDFTNDDLRALDFQDDGDADGDQAVGLIGDGGRRRSGAALEYGYEEEEEEEEEEEEESSNDVAV
IRNMDEMEDKLFWDTCMAGGYP