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Lsi09G013880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G013880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:21916913..21922573
RNA-Seq ExpressionLsi09G013880
SyntenyLsi09G013880
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033454.1 hypothetical protein E6C27_scaffold111G001150 [Cucumis melo var. makuwa]1.7e-2989.33Show/hide
Query:  LLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKD
        ++EMKFLGWY+KIGTVSALIGASME+FMIKTGFYDKVTV+ESE+LAWENSPEAQAIREALNPWRN DAAAEAR+D
Subjt:  LLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKD
XP_022959449.1 uncharacterized protein LOC111460420 [Cucurbita moschata]7.6e-3094.52Show/hide
Query:  MKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
        MKFLGWY+KIGTVSALIGASMEMFMIKTGFYDKVTVLESEK+AWENSPEAQAIREALNPWRN DAA EARKDT
Subjt:  MKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
XP_023006006.1 uncharacterized protein LOC111498883 [Cucurbita maxima]2.0e-3093.33Show/hide
Query:  LEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
        +EMKFLGWY+KIGTVSALIGASMEMFMIKTGFYDKVTVLESEK+AWENSPEAQAIREALNPWRN DAA EARKDT
Subjt:  LEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
XP_023548311.1 uncharacterized protein LOC111806987 [Cucurbita pepo subsp. pepo]2.0e-3092.11Show/hide
Query:  LLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
        ++EMKFLGWY+KIGTVSALIGASMEMFMIKTGFYDKVTVLESEK+AWENSPEAQAIREALNPWRN DAA EARKDT
Subjt:  LLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
XP_038906919.1 uncharacterized protein LOC120092786 [Benincasa hispida]1.5e-3097.26Show/hide
Query:  MKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
        MKFLGWY+KIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRN DAAAEARKDT
Subjt:  MKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
TrEMBL top hitse value%identityAlignment
A0A0A0K8V0 Uncharacterized protein5.5e-2684.72Show/hide
Query:  MKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKD
        MKFL WY+KIGTVSALIG SME+FMIK+GFYDKV V+ESE+LAWENSPEAQAIREALNPWRNSDAA EA K+
Subjt:  MKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKD
A0A5A7SQJ1 Uncharacterized protein8.2e-3089.33Show/hide
Query:  LLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKD
        ++EMKFLGWY+KIGTVSALIGASME+FMIKTGFYDKVTV+ESE+LAWENSPEAQAIREALNPWRN DAAAEAR+D
Subjt:  LLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKD
A0A6J1CA87 uncharacterized protein LOC1110097369.1e-2978.41Show/hide
Query:  EAARTLQLVPQLQLLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKD
        E A  L ++  L  ++MKFL WY+KIG VSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQA+REALNPWRN DA AEA+KD
Subjt:  EAARTLQLVPQLQLLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKD
A0A6J1H837 uncharacterized protein LOC1114604203.7e-3094.52Show/hide
Query:  MKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
        MKFLGWY+KIGTVSALIGASMEMFMIKTGFYDKVTVLESEK+AWENSPEAQAIREALNPWRN DAA EARKDT
Subjt:  MKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
A0A6J1KWK7 uncharacterized protein LOC1114988839.7e-3193.33Show/hide
Query:  LEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
        +EMKFLGWY+KIGTVSALIGASMEMFMIKTGFYDKVTVLESEK+AWENSPEAQAIREALNPWRN DAA EARKDT
Subjt:  LEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G62450.1 unknown protein1.6e-2272.06Show/hide
Query:  LLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDA
        +++ +FL WYLKI   SA+IG  ME FMIKTGFYDKVTV+E+E+ A ENSPEAQAIREALNPWRN DA
Subjt:  LLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTTGAGATCGGAGAATTAACAAATTTTCTCTCTGAAGCCGCAAGGACGTTGCAGCTAGTTCCGCAGCTTCAGCTTCTTGAAATGAAGTTTCTAGGTTGGTATTT
GAAGATTGGGACAGTTTCGGCTTTGATTGGAGCTTCCATGGAAATGTTCATGATTAAAACGGGCTTCTATGATAAAGTAACAGTTCTGGAGTCGGAGAAGCTGGCTTGGG
AAAACTCGCCTGAGGCTCAAGCAATTAGAGAAGCCCTCAATCCTTGGAGAAACAGCGATGCTGCTGCAGAGGCCAGGAAAGACACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTTTGAGATCGGAGAATTAACAAATTTTCTCTCTGAAGCCGCAAGGACGTTGCAGCTAGTTCCGCAGCTTCAGCTTCTTGAAATGAAGTTTCTAGGTTGGTATTT
GAAGATTGGGACAGTTTCGGCTTTGATTGGAGCTTCCATGGAAATGTTCATGATTAAAACGGGCTTCTATGATAAAGTAACAGTTCTGGAGTCGGAGAAGCTGGCTTGGG
AAAACTCGCCTGAGGCTCAAGCAATTAGAGAAGCCCTCAATCCTTGGAGAAACAGCGATGCTGCTGCAGAGGCCAGGAAAGACACCTAATGCTTCAACTGCTGACTGGAG
TAGTTGGTTTGCAAGGTAGAGAAAAATAATTACGGGGGAATCGAATTGAGGATAATGCAAGCACAGGCTTTTAAGGTTCAACTAATAAGAGGGGGATTTTAGAAAGCTGT
TTCTTTATGACATTGGAGGTTTGCTTATGATTGATTCCATATTAAAATTGAATGATATCACCAAGCTGAAGGTCTGATAATTCAATTAATTAGAAAGCTC
Protein sequenceShow/hide protein sequence
MMFEIGELTNFLSEAARTLQLVPQLQLLEMKFLGWYLKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAEARKDT