; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G014000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCASP-like protein
Genome locationchr09:22031447..22031677
RNA-Seq ExpressionLsi09G014000
SyntenyLsi09G014000
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006459 - Casparian strip membrane protein
IPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150813.1 CASP-like protein 1E1 [Cucumis sativus]3.3e-3096.05Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGA SFLSLS+LSALRLQ+GFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

XP_008458485.1 PREDICTED: CASP-like protein 1E1 isoform X4 [Cucumis melo]1.2e-2789.47Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        MDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA +FLSLS+LSA RLQ+GFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

XP_016902254.1 PREDICTED: CASP-like protein 1E2 isoform X1 [Cucumis melo]1.2e-2789.47Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        MDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA +FLSLS+LSA RLQ+GFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

XP_016902256.1 PREDICTED: CASP-like protein 1E2 isoform X3 [Cucumis melo]1.2e-2789.47Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        MDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA +FLSLS+LSA RLQ+GFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

XP_038875885.1 CASP-like protein 1E1 [Benincasa hispida]6.7e-3197.37Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFL+LSVLSALRLQ+GFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

TrEMBL top hitse value%identityAlignment
A0A0A0KHF5 CASP-like protein1.6e-3096.05Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGA SFLSLS+LSALRLQ+GFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

A0A1S3C7G4 CASP-like protein5.7e-2889.47Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        MDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA +FLSLS+LSA RLQ+GFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

A0A1S4E1Z7 CASP-like protein5.7e-2889.47Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        MDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA +FLSLS+LSA RLQ+GFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

A0A1S4E203 CASP-like protein5.7e-2889.47Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        MDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA +FLSLS+LSA RLQ+GFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

A0A1S4E2P9 CASP-like protein5.7e-2889.47Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        MDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA +FLSLS+LSA RLQ+GFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

SwissProt top hitse value%identityAlignment
B9HMP6 CASP-like protein 1E16.3e-1656.58Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        +D+L VA+LFS  GAA A+G +G QGNSH+ W K+C+VFGRFC Q A S+ LSLLG+  FL L  +++LRL K  K
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

B9RT04 CASP-like protein 1E15.7e-1756.58Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK
        +D+L VALLFS  GAA A+G +G +GNSH+ WNK+CNVFG+FC Q AAS++LSL+G+  F+ L +L+A RL    K
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK

C6SZP8 CASP-like protein 1E21.5e-1758.9Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQK
        +D   VALLFSG GAAAAVG +G +GNSH+NWNK+CNVFG+FC Q AAS+ +SL+G+ +FL L ++  +RL +
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQK

C6TBD0 CASP-like protein 1E11.5e-1760.27Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQK
        +D   VALLFSG GAAAAVG +G +GNSH+NWNK+CNVFG+FC Q AAS+ +SL+G+ +FL L V+  +RL +
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQK

D7MAF6 CASP-like protein 1E22.0e-1455.71Show/hide
Query:  DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRL
        D++ VALLFSG GAA+A+G +G QGN H+ WNK+C VFG+FC + A SL L+ L A  F+ L VL A++L
Subjt:  DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRL

Arabidopsis top hitse value%identityAlignment
AT3G06390.1 Uncharacterised protein family (UPF0497)1.7e-0843.48Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSAL
        +D++ + +L S  G A  V  I  +GN  + WNKICNV+ +FC   A SL LSL  +   L LS+ SAL
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSAL

AT4G15610.1 Uncharacterised protein family (UPF0497)1.9e-0734.25Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQK
        MD + V ++ S  GA   V  +G +GN  + W KIC+++ +FC     ++ +SL  +   L LS++S L L K
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQK

AT4G15620.1 Uncharacterised protein family (UPF0497)9.3e-1554.29Show/hide
Query:  DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRL
        D++ VALLFSG GAA+A+G +G  GN H+ W K+C VFG+FC + A SL L+LL A  F+ L VL A++L
Subjt:  DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRL

AT4G15630.1 Uncharacterised protein family (UPF0497)5.5e-1551.43Show/hide
Query:  DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRL
        D++ VALLFS  GAA A+G +GR GN H+ W K+C VFG+FC Q A S+ ++L+ +  F+ L VL AL+L
Subjt:  DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRL

AT5G44550.1 Uncharacterised protein family (UPF0497)8.5e-0836.62Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRL
        +D+L V L+ +   AAA +  +G+ GN H  W+KIC+ F  +C  GA +L+ +  G    L +S  S  RL
Subjt:  MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTCTGACGGTGGCGCTGCTGTTTTCCGGCTTTGGAGCCGCCGCTGCCGTCGGCGCCATCGGGCGGCAAGGGAATTCACATCTTAACTGGAACAAAATTTGCAA
TGTGTTTGGAAGATTCTGTGGTCAAGGAGCTGCCTCTCTTCTCCTCTCCTTGCTTGGAGCGACGTCGTTTCTCTCTCTTTCTGTGCTCTCTGCTTTGAGGCTTCAAAAGG
GATTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACATTCTGACGGTGGCGCTGCTGTTTTCCGGCTTTGGAGCCGCCGCTGCCGTCGGCGCCATCGGGCGGCAAGGGAATTCACATCTTAACTGGAACAAAATTTGCAA
TGTGTTTGGAAGATTCTGTGGTCAAGGAGCTGCCTCTCTTCTCCTCTCCTTGCTTGGAGCGACGTCGTTTCTCTCTCTTTCTGTGCTCTCTGCTTTGAGGCTTCAAAAGG
GATTCAAATGA
Protein sequenceShow/hide protein sequence
MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSVLSALRLQKGFK