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Lsi09G014010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCASP-like protein
Genome locationchr09:22034355..22034594
RNA-Seq ExpressionLsi09G014010
SyntenyLsi09G014010
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033465.1 CASP-like protein 1E1 isoform X4 [Cucumis melo var. makuwa]7.2e-2885.19Show/hide
Query:  MDGQRKAGFGVPGGSRSETT--AARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDG RKAGFGVP GSRSETT    RFCD +VRF+AMILTLAAAVVIGVDKQTKTVPLQLAA+LPPLHVPVTARWHYLS+ V
Subjt:  MDGQRKAGFGVPGGSRSETT--AARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
KAE8646986.1 hypothetical protein Csa_020948, partial [Cucumis sativus]4.7e-2782.93Show/hide
Query:  MDGQRKAGFGVPGGSRSET---TAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDG RKAGFGVP GSRSET   T  RFCD +VRF+AMILTLAAAVVIGVDKQTK VPLQLA +LPP+HVPVTARWHYLSALV
Subjt:  MDGQRKAGFGVPGGSRSET---TAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
XP_004150813.1 CASP-like protein 1E1 [Cucumis sativus]4.7e-2782.93Show/hide
Query:  MDGQRKAGFGVPGGSRSET---TAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDG RKAGFGVP GSRSET   T  RFCD +VRF+AMILTLAAAVVIGVDKQTK VPLQLA +LPP+HVPVTARWHYLSALV
Subjt:  MDGQRKAGFGVPGGSRSET---TAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
XP_008458485.1 PREDICTED: CASP-like protein 1E1 isoform X4 [Cucumis melo]7.2e-2885.19Show/hide
Query:  MDGQRKAGFGVPGGSRSETT--AARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDG RKAGFGVP GSRSETT    RFCD +VRF+AMILTLAAAVVIGVDKQTKTVPLQLAA+LPPLHVPVTARWHYLS+ V
Subjt:  MDGQRKAGFGVPGGSRSETT--AARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
XP_038875885.1 CASP-like protein 1E1 [Benincasa hispida]1.0e-2989.87Show/hide
Query:  MDGQRKAGFGVPGGSRSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDG RKAGFGVP GSRSETT ARFCD +VRF+AMILTLAAAVVIGVDKQTKTVPLQLA ALPPLHVPVTARWHYLSA V
Subjt:  MDGQRKAGFGVPGGSRSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
TrEMBL top hitse value%identityAlignment
A0A0A0KBW8 CASP-like protein2.3e-2782.93Show/hide
Query:  MDGQRKAGFGVPGGSRSET---TAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDG RKAGFGVP GSRSET   T  RFCD +VRF+AMILTLAAAVVIGVDKQTK VPLQLA +LPP+HVPVTARWHYLSALV
Subjt:  MDGQRKAGFGVPGGSRSET---TAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
A0A1S3C7G4 CASP-like protein3.5e-2885.19Show/hide
Query:  MDGQRKAGFGVPGGSRSETT--AARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDG RKAGFGVP GSRSETT    RFCD +VRF+AMILTLAAAVVIGVDKQTKTVPLQLAA+LPPLHVPVTARWHYLS+ V
Subjt:  MDGQRKAGFGVPGGSRSETT--AARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
A0A5A7SWC2 CASP-like protein3.5e-2885.19Show/hide
Query:  MDGQRKAGFGVPGGSRSETT--AARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDG RKAGFGVP GSRSETT    RFCD +VRF+AMILTLAAAVVIGVDKQTKTVPLQLAA+LPPLHVPVTARWHYLS+ V
Subjt:  MDGQRKAGFGVPGGSRSETT--AARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
A0A6J1H563 CASP-like protein1.2e-2378.48Show/hide
Query:  MDGQRKAGFGVPGGSRSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDGQRKAGFGV  G  SETT ARFCD ++RF+AMILTLAAA+VIGVDKQ KTV LQL AALPPL +PVTARWHY SA V
Subjt:  MDGQRKAGFGVPGGSRSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
A0A6J1L415 CASP-like protein2.6e-2378.48Show/hide
Query:  MDGQRKAGFGVPGGSRSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDGQRKAGFGV  GS + TT ARFCD ++RF+AMILTLAAAVVIGVDKQ KTV LQL AALPPL +PVTARWHY SA V
Subjt:  MDGQRKAGFGVPGGSRSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
SwissProt top hitse value%identityAlignment
A7NW78 CASP-like protein 1E22.9e-1148.81Show/hide
Query:  MDGQRKAGFGVPGGSRSETTAA-----RFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        M+ + K  FG       E         R  D V+R +A+ LTL AAV++GVDKQTK V LQL   LPP+ VPVTA+W YLSA V
Subjt:  MDGQRKAGFGVPGGSRSETTAA-----RFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
B9HMP6 CASP-like protein 1E14.7e-1448.78Show/hide
Query:  MDGQRKAGFGVPGGSR-----SETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSA
        M+ Q KA   V  G       S++  A  CD ++R LA++LTLAAA+V+GVDKQTK VP+++   LP +++PV+A+WHYLSA
Subjt:  MDGQRKAGFGVPGGSR-----SETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSA
B9RT04 CASP-like protein 1E12.9e-1148.1Show/hide
Query:  MDGQRKAGFGVPGGSRSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        MDG    G    GG  +          V+R LA +LT  AA+V GV+ QT+TVP+QL +++PPL+VPV A+WHYLSA V
Subjt:  MDGQRKAGFGVPGGSRSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
C6SZP8 CASP-like protein 1E21.7e-1153.97Show/hide
Query:  SETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        ++  A    D ++R LA  +TL AA+VI VDKQTK VP+QL+ +LPPL VP+TA+WH +SA+V
Subjt:  SETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
C6TBD0 CASP-like protein 1E17.5e-1260Show/hide
Query:  CDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        CD ++R LA  +TL AA+VI VDKQTK VP+QL+ + PPL+VP+TA+WH +SA V
Subjt:  CDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
Arabidopsis top hitse value%identityAlignment
AT4G15620.1 Uncharacterised protein family (UPF0497)5.2e-0846.88Show/hide
Query:  RSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        + E  + +  +  +R LA+ILT+AAA V+GV KQTK V ++L   LPPL +  TA+  YLSA V
Subjt:  RSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
AT4G15630.1 Uncharacterised protein family (UPF0497)4.7e-0946.88Show/hide
Query:  RSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV
        + E+ + +  +  +R LA++LT+ AA V+GV KQTK VP++L   LPPL+V  TA+  YLSA V
Subjt:  RSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCCAGAGGAAGGCCGGATTTGGCGTACCGGGCGGATCGCGATCGGAGACGACGGCGGCTAGGTTTTGCGATTTCGTTGTGAGGTTTTTGGCGATGATTCTCAC
TTTGGCCGCTGCTGTCGTTATCGGCGTCGACAAACAGACGAAAACGGTGCCGCTTCAACTCGCCGCCGCGTTGCCGCCGCTCCACGTTCCGGTTACTGCACGGTGGCATT
ATTTATCTGCCTTGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCCAGAGGAAGGCCGGATTTGGCGTACCGGGCGGATCGCGATCGGAGACGACGGCGGCTAGGTTTTGCGATTTCGTTGTGAGGTTTTTGGCGATGATTCTCAC
TTTGGCCGCTGCTGTCGTTATCGGCGTCGACAAACAGACGAAAACGGTGCCGCTTCAACTCGCCGCCGCGTTGCCGCCGCTCCACGTTCCGGTTACTGCACGGTGGCATT
ATTTATCTGCCTTGGTGTAA
Protein sequenceShow/hide protein sequence
MDGQRKAGFGVPGGSRSETTAARFCDFVVRFLAMILTLAAAVVIGVDKQTKTVPLQLAAALPPLHVPVTARWHYLSALV