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Lsi09G014030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein RALF-like 4
Genome locationchr09:22041833..22042186
RNA-Seq ExpressionLsi09G014030
SyntenyLsi09G014030
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148669.1 protein RALF-like 19 [Cucumis sativus]2.3e-3870.34Show/hide
Query:  MGNVKLCLFLLFIAVATAPLALAFPDDWARAYG-APDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKA
        M + KLCLFLL IAV  APL LA  DDW R+Y   PDY F      T + +DSRRLLFQYGFAYKYP+N+YL YDALRKNNIPC  RG SYY C+KR+KA
Subjt:  MGNVKLCLFLLFIAVATAPLALAFPDDWARAYG-APDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKA

Query:  NPYRRGCTAITGCARFTD
        NPYRRGC AITGCARFTD
Subjt:  NPYRRGCTAITGCARFTD

XP_004150814.1 protein RALF-like 4 [Cucumis sativus]1.3e-3873.91Show/hide
Query:  LCLFLLFIAVA-TAPLALAFPDDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPY
        LCL LL  A+A T P+AL    DW RAYG PDYAFWG++ P T   VDDSRRLLFQYGFAYKYP+N+YL YDALRKNN PC  RG SYY C KRRKANPY
Subjt:  LCLFLLFIAVA-TAPLALAFPDDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPY

Query:  RRGCTAITGCARFTD
        RRGC AITGCARFTD
Subjt:  RRGCTAITGCARFTD

XP_008441015.1 PREDICTED: protein RALF-like 19 [Cucumis melo]1.3e-3871.79Show/hide
Query:  MGNVKLCLFLLFIAVATAPLALAFPDDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKAN
        M ++KL LFLL IAV  APL LAF DDW  AY AP+Y F      TT  +DSRRLLFQYGFAYKYP+N+YL YDALRKNN PC  RG SYY C+KRRKAN
Subjt:  MGNVKLCLFLLFIAVATAPLALAFPDDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKAN

Query:  PYRRGCTAITGCARFTD
        PYRRGC AITGCARFTD
Subjt:  PYRRGCTAITGCARFTD

XP_016902249.1 PREDICTED: protein RALF-like 4 [Cucumis melo]1.0e-3871.43Show/hide
Query:  VKLCLFLLFIA---VATAPLALAFPDDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRK
        +KLCL LL +     AT P+AL    DW RA+G P+YAFWG+S P T   VDDSRRLLFQYGFAYKYP+N+YL YDALRKNN PC RRG SYY C KRRK
Subjt:  VKLCLFLLFIA---VATAPLALAFPDDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRK

Query:  ANPYRRGCTAITGCARFTD
        ANPYRRGC AITGCARFTD
Subjt:  ANPYRRGCTAITGCARFTD

XP_038876152.1 uncharacterized protein LOC120068449 [Benincasa hispida]1.9e-4575.21Show/hide
Query:  MGNVKLCLFLLFIAVATAPLALAFPDDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKAN
        MG +KLCLFLL +A A +PL+ A+  DW  AYGAP+YAFWGSSTPT  ++D+RRLLFQYGFAYKYPRNRYLSY+ALRKNN+PCG RG SYY C + +KAN
Subjt:  MGNVKLCLFLLFIAVATAPLALAFPDDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKAN

Query:  PYRRGCTAITGCARFTD
        PYRRGCTAITGCARFTD
Subjt:  PYRRGCTAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A0A0KCD7 F3H9.8 protein6.5e-3973.91Show/hide
Query:  LCLFLLFIAVA-TAPLALAFPDDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPY
        LCL LL  A+A T P+AL    DW RAYG PDYAFWG++ P T   VDDSRRLLFQYGFAYKYP+N+YL YDALRKNN PC  RG SYY C KRRKANPY
Subjt:  LCLFLLFIAVA-TAPLALAFPDDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPY

Query:  RRGCTAITGCARFTD
        RRGC AITGCARFTD
Subjt:  RRGCTAITGCARFTD

A0A1S3B2H7 protein RALF-like 196.5e-3971.79Show/hide
Query:  MGNVKLCLFLLFIAVATAPLALAFPDDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKAN
        M ++KL LFLL IAV  APL LAF DDW  AY AP+Y F      TT  +DSRRLLFQYGFAYKYP+N+YL YDALRKNN PC  RG SYY C+KRRKAN
Subjt:  MGNVKLCLFLLFIAVATAPLALAFPDDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKAN

Query:  PYRRGCTAITGCARFTD
        PYRRGC AITGCARFTD
Subjt:  PYRRGCTAITGCARFTD

A0A1S4E1Z3 protein RALF-like 45.0e-3971.43Show/hide
Query:  VKLCLFLLFIA---VATAPLALAFPDDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRK
        +KLCL LL +     AT P+AL    DW RA+G P+YAFWG+S P T   VDDSRRLLFQYGFAYKYP+N+YL YDALRKNN PC RRG SYY C KRRK
Subjt:  VKLCLFLLFIA---VATAPLALAFPDDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRK

Query:  ANPYRRGCTAITGCARFTD
        ANPYRRGC AITGCARFTD
Subjt:  ANPYRRGCTAITGCARFTD

A0A5A7SVY5 Protein RALF-like 45.0e-3971.43Show/hide
Query:  VKLCLFLLFIA---VATAPLALAFPDDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRK
        +KLCL LL +     AT P+AL    DW RA+G P+YAFWG+S P T   VDDSRRLLFQYGFAYKYP+N+YL YDALRKNN PC RRG SYY C KRRK
Subjt:  VKLCLFLLFIA---VATAPLALAFPDDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRK

Query:  ANPYRRGCTAITGCARFTD
        ANPYRRGC AITGCARFTD
Subjt:  ANPYRRGCTAITGCARFTD

A0A5D3DPV5 Protein RALF-like 196.5e-3971.79Show/hide
Query:  MGNVKLCLFLLFIAVATAPLALAFPDDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKAN
        M ++KL LFLL IAV  APL LAF DDW  AY AP+Y F      TT  +DSRRLLFQYGFAYKYP+N+YL YDALRKNN PC  RG SYY C+KRRKAN
Subjt:  MGNVKLCLFLLFIAVATAPLALAFPDDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKAN

Query:  PYRRGCTAITGCARFTD
        PYRRGC AITGCARFTD
Subjt:  PYRRGCTAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 194.1e-1468Show/hide
Query:  RNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCARFT
        R  Y+SY ALRKNN+PC RRG SYY C+KR++ANPYRRGC+ IT C R T
Subjt:  RNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCARFT

Q8L9P8 Protein RALF-like 337.2e-1160.87Show/hide
Query:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR
        +Y+SY ALR+N +PC RRG SYY C +  +ANPY RGC+AIT C R
Subjt:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR

Q9FZA0 Protein RALF-like 41.4e-1470.21Show/hide
Query:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCARF
        RY+ YDAL+KNN+PC RRG SYY C+KRR+ NPYRRGC+AIT C R+
Subjt:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCARF

Q9LUS7 Rapid alkalinization factor 232.5e-1165.22Show/hide
Query:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR
        RY+SY ALR+N IPC RRG SYY C +  +ANPY RGC+AIT C R
Subjt:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR

Q9MA62 Protein RALF-like 221.9e-1149.23Show/hide
Query:  DDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR
        D SRR+L Q          +Y+SY A+R+N++PC RRG SYY C++  +ANPY RGC+ IT C R
Subjt:  DDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 41.0e-1570.21Show/hide
Query:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCARF
        RY+ YDAL+KNN+PC RRG SYY C+KRR+ NPYRRGC+AIT C R+
Subjt:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCARF

AT2G33775.1 ralf-like 192.9e-1568Show/hide
Query:  RNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCARFT
        R  Y+SY ALRKNN+PC RRG SYY C+KR++ANPYRRGC+ IT C R T
Subjt:  RNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCARFT

AT3G05490.1 ralf-like 221.3e-1249.23Show/hide
Query:  DDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR
        D SRR+L Q          +Y+SY A+R+N++PC RRG SYY C++  +ANPY RGC+ IT C R
Subjt:  DDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR

AT3G16570.1 rapid alkalinization factor 231.8e-1265.22Show/hide
Query:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR
        RY+SY ALR+N IPC RRG SYY C +  +ANPY RGC+AIT C R
Subjt:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR

AT4G15800.1 ralf-like 335.1e-1260.87Show/hide
Query:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR
        +Y+SY ALR+N +PC RRG SYY C +  +ANPY RGC+AIT C R
Subjt:  RYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACGTGAAGCTCTGCCTATTTCTCCTCTTCATCGCCGTCGCCACCGCCCCTCTTGCCCTTGCCTTTCCCGACGACTGGGCCCGTGCTTACGGTGCACCCGATTA
CGCCTTTTGGGGCTCATCCACACCAACGACAGCGGTTGACGACAGCCGGCGGCTACTCTTCCAATATGGATTTGCTTACAAATACCCAAGAAACAGGTATTTGAGCTATG
ATGCACTTAGGAAGAACAATATCCCTTGCGGCCGCCGTGGTACCTCTTACTATGCCTGCGAGAAGCGCCGAAAGGCCAACCCTTACCGTCGTGGTTGCACCGCCATCACC
GGCTGCGCTCGCTTCACAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACGTGAAGCTCTGCCTATTTCTCCTCTTCATCGCCGTCGCCACCGCCCCTCTTGCCCTTGCCTTTCCCGACGACTGGGCCCGTGCTTACGGTGCACCCGATTA
CGCCTTTTGGGGCTCATCCACACCAACGACAGCGGTTGACGACAGCCGGCGGCTACTCTTCCAATATGGATTTGCTTACAAATACCCAAGAAACAGGTATTTGAGCTATG
ATGCACTTAGGAAGAACAATATCCCTTGCGGCCGCCGTGGTACCTCTTACTATGCCTGCGAGAAGCGCCGAAAGGCCAACCCTTACCGTCGTGGTTGCACCGCCATCACC
GGCTGCGCTCGCTTCACAGATTAA
Protein sequenceShow/hide protein sequence
MGNVKLCLFLLFIAVATAPLALAFPDDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYACEKRRKANPYRRGCTAIT
GCARFTD