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Lsi09G014040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein RALF-like 4
Genome locationchr09:22045673..22046023
RNA-Seq ExpressionLsi09G014040
SyntenyLsi09G014040
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148669.1 protein RALF-like 19 [Cucumis sativus]6.8e-3567.23Show/hide
Query:  MGNVKLCLFFLFIAIAYAP--LALANDWARAYG-APDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQK
        M + KLCLF L IA+  AP  LAL++DW R+Y   PDY F      T + +DSRRLLFQYGFAYKYP+N+YL YDAL+KNNIPC  RG SYYD C KR+K
Subjt:  MGNVKLCLFFLFIAIAYAP--LALANDWARAYG-APDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQK

Query:  ANPYRRGCTAITGCARFTD
        ANPYRRGC AITGCARFTD
Subjt:  ANPYRRGCTAITGCARFTD

XP_004150814.1 protein RALF-like 4 [Cucumis sativus]5.6e-3772.81Show/hide
Query:  LCLFFLFIAIAYA-PLALANDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYR
        LCL  L  AIA   P+AL  DW RAYG PDYAFWG++ P T   VDDSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC  RG SYYD C+KR+KANPYR
Subjt:  LCLFFLFIAIAYA-PLALANDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYR

Query:  RGCTAITGCARFTD
        RGC AITGCARFTD
Subjt:  RGCTAITGCARFTD

XP_008441015.1 PREDICTED: protein RALF-like 19 [Cucumis melo]5.8e-3466.95Show/hide
Query:  MGNVKLCLFFLFIAIAYAPLALA--NDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKA
        M ++KL LF L IA+  APL LA  +DW  AY AP+Y F      TT  +DSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC  RG SYYD C KR+KA
Subjt:  MGNVKLCLFFLFIAIAYAPLALA--NDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKA

Query:  NPYRRGCTAITGCARFTD
        NPYRRGC AITGCARFTD
Subjt:  NPYRRGCTAITGCARFTD

XP_016902249.1 PREDICTED: protein RALF-like 4 [Cucumis melo]8.6e-3870.34Show/hide
Query:  VKLCLFFLFIAIAYA---PLALANDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKA
        +KLCL  L +  A+A   P+AL  DW RA+G P+YAFWG+S P T   VDDSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC RRG SYYD C+KR+KA
Subjt:  VKLCLFFLFIAIAYA---PLALANDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKA

Query:  NPYRRGCTAITGCARFTD
        NPYRRGC AITGCARFTD
Subjt:  NPYRRGCTAITGCARFTD

XP_038876152.1 uncharacterized protein LOC120068449 [Benincasa hispida]1.2e-4475.21Show/hide
Query:  MGNVKLCLFFLFIAIAYAPLALA-NDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKAN
        MG +KLCLF L +A A +PL+ A +DW  AYGAP+YAFWGSSTPT  ++D+RRLLFQYGFAYKYPRNRYLSY+AL+KNN+PCG RG SYYD C++ QKAN
Subjt:  MGNVKLCLFFLFIAIAYAPLALA-NDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKAN

Query:  PYRRGCTAITGCARFTD
        PYRRGCTAITGCARFTD
Subjt:  PYRRGCTAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A0A0KCD7 F3H9.8 protein2.7e-3772.81Show/hide
Query:  LCLFFLFIAIAYA-PLALANDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYR
        LCL  L  AIA   P+AL  DW RAYG PDYAFWG++ P T   VDDSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC  RG SYYD C+KR+KANPYR
Subjt:  LCLFFLFIAIAYA-PLALANDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYR

Query:  RGCTAITGCARFTD
        RGC AITGCARFTD
Subjt:  RGCTAITGCARFTD

A0A0A0KHU4 Uncharacterized protein3.3e-3567.23Show/hide
Query:  MGNVKLCLFFLFIAIAYAP--LALANDWARAYG-APDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQK
        M + KLCLF L IA+  AP  LAL++DW R+Y   PDY F      T + +DSRRLLFQYGFAYKYP+N+YL YDAL+KNNIPC  RG SYYD C KR+K
Subjt:  MGNVKLCLFFLFIAIAYAP--LALANDWARAYG-APDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQK

Query:  ANPYRRGCTAITGCARFTD
        ANPYRRGC AITGCARFTD
Subjt:  ANPYRRGCTAITGCARFTD

A0A1S4E1Z3 protein RALF-like 44.2e-3870.34Show/hide
Query:  VKLCLFFLFIAIAYA---PLALANDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKA
        +KLCL  L +  A+A   P+AL  DW RA+G P+YAFWG+S P T   VDDSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC RRG SYYD C+KR+KA
Subjt:  VKLCLFFLFIAIAYA---PLALANDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKA

Query:  NPYRRGCTAITGCARFTD
        NPYRRGC AITGCARFTD
Subjt:  NPYRRGCTAITGCARFTD

A0A5A7SVY5 Protein RALF-like 44.2e-3870.34Show/hide
Query:  VKLCLFFLFIAIAYA---PLALANDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKA
        +KLCL  L +  A+A   P+AL  DW RA+G P+YAFWG+S P T   VDDSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC RRG SYYD C+KR+KA
Subjt:  VKLCLFFLFIAIAYA---PLALANDWARAYGAPDYAFWGSSTPTTA--VDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKA

Query:  NPYRRGCTAITGCARFTD
        NPYRRGC AITGCARFTD
Subjt:  NPYRRGCTAITGCARFTD

A0A5D3DPV5 Protein RALF-like 192.8e-3466.95Show/hide
Query:  MGNVKLCLFFLFIAIAYAPLALA--NDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKA
        M ++KL LF L IA+  APL LA  +DW  AY AP+Y F      TT  +DSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC  RG SYYD C KR+KA
Subjt:  MGNVKLCLFFLFIAIAYAPLALA--NDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKA

Query:  NPYRRGCTAITGCARFTD
        NPYRRGC AITGCARFTD
Subjt:  NPYRRGCTAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 192.6e-1366.67Show/hide
Query:  RNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCARFT
        R  Y+SY AL+KNN+PC RRG SYYD C KR++ANPYRRGC+ IT C R T
Subjt:  RNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCARFT

Q8L9P8 Protein RALF-like 331.8e-0957.45Show/hide
Query:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR
        +Y+SY AL++N +PC RRG SYY+ C +  +ANPY RGC+AIT C R
Subjt:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR

Q9FZA0 Protein RALF-like 45.3e-1470.83Show/hide
Query:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCARF
        RY+ YDALKKNN+PC RRG SYYD C KR++ NPYRRGC+AIT C R+
Subjt:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCARF

Q9LUS7 Rapid alkalinization factor 236.0e-1061.7Show/hide
Query:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR
        RY+SY AL++N IPC RRG SYY+ C +  +ANPY RGC+AIT C R
Subjt:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR

Q9MA62 Protein RALF-like 226.0e-1046.97Show/hide
Query:  DDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR
        D SRR+L Q          +Y+SY A+++N++PC RRG SYY+ C +  +ANPY RGC+ IT C R
Subjt:  DDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 43.8e-1570.83Show/hide
Query:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCARF
        RY+ YDALKKNN+PC RRG SYYD C KR++ NPYRRGC+AIT C R+
Subjt:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCARF

AT2G33775.1 ralf-like 191.9e-1466.67Show/hide
Query:  RNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCARFT
        R  Y+SY AL+KNN+PC RRG SYYD C KR++ANPYRRGC+ IT C R T
Subjt:  RNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCARFT

AT3G05490.1 ralf-like 224.3e-1146.97Show/hide
Query:  DDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR
        D SRR+L Q          +Y+SY A+++N++PC RRG SYY+ C +  +ANPY RGC+ IT C R
Subjt:  DDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR

AT3G16570.1 rapid alkalinization factor 234.3e-1161.7Show/hide
Query:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR
        RY+SY AL++N IPC RRG SYY+ C +  +ANPY RGC+AIT C R
Subjt:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR

AT4G15800.1 ralf-like 331.2e-1057.45Show/hide
Query:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR
        +Y+SY AL++N +PC RRG SYY+ C +  +ANPY RGC+AIT C R
Subjt:  RYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACGTGAAGCTCTGCCTATTTTTCCTCTTCATCGCCATCGCTTATGCCCCTCTTGCCCTTGCCAACGACTGGGCCCGTGCCTACGGCGCACCTGACTATGCCTT
CTGGGGTTCATCGACACCAACGACAGCGGTCGACGACAGCCGGCGGCTACTCTTCCAATATGGATTTGCTTACAAATACCCAAGAAACAGGTATTTGAGCTATGATGCAC
TTAAGAAGAACAATATCCCCTGCGGCCGCCGTGGTACCTCTTACTATGATAGGTGCTCGAAGCGTCAAAAGGCCAACCCTTACCGCCGTGGTTGCACCGCCATCACCGGA
TGCGCTCGATTCACTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACGTGAAGCTCTGCCTATTTTTCCTCTTCATCGCCATCGCTTATGCCCCTCTTGCCCTTGCCAACGACTGGGCCCGTGCCTACGGCGCACCTGACTATGCCTT
CTGGGGTTCATCGACACCAACGACAGCGGTCGACGACAGCCGGCGGCTACTCTTCCAATATGGATTTGCTTACAAATACCCAAGAAACAGGTATTTGAGCTATGATGCAC
TTAAGAAGAACAATATCCCCTGCGGCCGCCGTGGTACCTCTTACTATGATAGGTGCTCGAAGCGTCAAAAGGCCAACCCTTACCGCCGTGGTTGCACCGCCATCACCGGA
TGCGCTCGATTCACTGATTAA
Protein sequenceShow/hide protein sequence
MGNVKLCLFFLFIAIAYAPLALANDWARAYGAPDYAFWGSSTPTTAVDDSRRLLFQYGFAYKYPRNRYLSYDALKKNNIPCGRRGTSYYDRCSKRQKANPYRRGCTAITG
CARFTD