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Lsi09G014050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein RALF-like 4
Genome locationchr09:22050312..22050641
RNA-Seq ExpressionLsi09G014050
SyntenyLsi09G014050
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148669.1 protein RALF-like 19 [Cucumis sativus]9.6e-3164.1Show/hide
Query:  MGSAKLGLFLLFIAIV-------VPNNWARVYG-APDYAVWSSSTTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKAN
        M S KL LFLL IA+V       + ++W R Y   PDY      T + +DSRRLLFQYGFAYKYP+N+YL YDAL+KNNIPC  RG SYY DC KR+KAN
Subjt:  MGSAKLGLFLLFIAIV-------VPNNWARVYG-APDYAVWSSSTTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKAN

Query:  PYRRGCTAITGCARFTD
        PYRRGC AITGCARFTD
Subjt:  PYRRGCTAITGCARFTD

XP_004150814.1 protein RALF-like 4 [Cucumis sativus]1.6e-3367.24Show/hide
Query:  KLGLFLLF----IAIVVP---NNWARVYGAPDYAVWSSSTTA----IDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP
        KLGL LL     IAI +P    +W R YG PDYA W ++  A    +DDSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC  RG SYY DCTKR+KANP
Subjt:  KLGLFLLF----IAIVVP---NNWARVYGAPDYAVWSSSTTA----IDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP

Query:  YRRGCTAITGCARFTD
        YRRGC AITGCARFTD
Subjt:  YRRGCTAITGCARFTD

XP_008441015.1 PREDICTED: protein RALF-like 19 [Cucumis melo]6.6e-3264.66Show/hide
Query:  MGSAKLGLFLLFIAIVV-------PNNWARVYGAPDYAVWSSSTTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP
        M S KLGLFLL IA+V         ++W   Y AP+Y      TT  +DSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC  RG SYY DC KR+KANP
Subjt:  MGSAKLGLFLLFIAIVV-------PNNWARVYGAPDYAVWSSSTTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP

Query:  YRRGCTAITGCARFTD
        YRRGC AITGCARFTD
Subjt:  YRRGCTAITGCARFTD

XP_016902249.1 PREDICTED: protein RALF-like 4 [Cucumis melo]6.6e-3271.28Show/hide
Query:  NWARVYGAPDYAVWSSSTTA----IDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFTD
        +W R +G P+YA W +S  A    +DDSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC +RG SYY DCTKR+KANPYRRGC AITGCARFTD
Subjt:  NWARVYGAPDYAVWSSSTTA----IDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFTD

XP_038876152.1 uncharacterized protein LOC120068449 [Benincasa hispida]3.6e-3868.97Show/hide
Query:  MGSAKLGLFLLFIAIVVP-----NNWARVYGAPDYAVWSSS--TTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP
        MG+ KL LFLL +A V P     ++W   YGAP+YA W SS  T  I+D+RRLLFQYGFAYKYPRNRYL+Y+AL+KNN+PCG RG SYY DC + QKANP
Subjt:  MGSAKLGLFLLFIAIVVP-----NNWARVYGAPDYAVWSSS--TTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP

Query:  YRRGCTAITGCARFTD
        YRRGCTAITGCARFTD
Subjt:  YRRGCTAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A0A0KCD7 F3H9.8 protein7.6e-3467.24Show/hide
Query:  KLGLFLLF----IAIVVP---NNWARVYGAPDYAVWSSSTTA----IDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP
        KLGL LL     IAI +P    +W R YG PDYA W ++  A    +DDSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC  RG SYY DCTKR+KANP
Subjt:  KLGLFLLF----IAIVVP---NNWARVYGAPDYAVWSSSTTA----IDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP

Query:  YRRGCTAITGCARFTD
        YRRGC AITGCARFTD
Subjt:  YRRGCTAITGCARFTD

A0A1S3B2H7 protein RALF-like 193.2e-3264.66Show/hide
Query:  MGSAKLGLFLLFIAIVV-------PNNWARVYGAPDYAVWSSSTTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP
        M S KLGLFLL IA+V         ++W   Y AP+Y      TT  +DSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC  RG SYY DC KR+KANP
Subjt:  MGSAKLGLFLLFIAIVV-------PNNWARVYGAPDYAVWSSSTTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP

Query:  YRRGCTAITGCARFTD
        YRRGC AITGCARFTD
Subjt:  YRRGCTAITGCARFTD

A0A1S4E1Z3 protein RALF-like 43.2e-3271.28Show/hide
Query:  NWARVYGAPDYAVWSSSTTA----IDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFTD
        +W R +G P+YA W +S  A    +DDSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC +RG SYY DCTKR+KANPYRRGC AITGCARFTD
Subjt:  NWARVYGAPDYAVWSSSTTA----IDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFTD

A0A5A7SVY5 Protein RALF-like 43.2e-3271.28Show/hide
Query:  NWARVYGAPDYAVWSSSTTA----IDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFTD
        +W R +G P+YA W +S  A    +DDSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC +RG SYY DCTKR+KANPYRRGC AITGCARFTD
Subjt:  NWARVYGAPDYAVWSSSTTA----IDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFTD

A0A5D3DPV5 Protein RALF-like 193.2e-3264.66Show/hide
Query:  MGSAKLGLFLLFIAIVV-------PNNWARVYGAPDYAVWSSSTTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP
        M S KLGLFLL IA+V         ++W   Y AP+Y      TT  +DSRRLLFQYGFAYKYP+N+YL YDAL+KNN PC  RG SYY DC KR+KANP
Subjt:  MGSAKLGLFLLFIAIVV-------PNNWARVYGAPDYAVWSSSTTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANP

Query:  YRRGCTAITGCARFTD
        YRRGC AITGCARFTD
Subjt:  YRRGCTAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 191.2e-1262.75Show/hide
Query:  RNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFT
        R  Y++Y AL+KNN+PC +RG SYY DC KR++ANPYRRGC+ IT C R T
Subjt:  RNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFT

Q8L9P8 Protein RALF-like 334.8e-0953.19Show/hide
Query:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR
        +Y++Y AL++N +PC +RG SYY +C +  +ANPY RGC+AIT C R
Subjt:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR

Q9FZA0 Protein RALF-like 41.9e-1368.75Show/hide
Query:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARF
        RY+ YDALKKNN+PC +RG SYY DC KR++ NPYRRGC+AIT C R+
Subjt:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARF

Q9LUS7 Rapid alkalinization factor 231.7e-0957.45Show/hide
Query:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR
        RY++Y AL++N IPC +RG SYY +C +  +ANPY RGC+AIT C R
Subjt:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR

Q9MA62 Protein RALF-like 222.8e-0943.94Show/hide
Query:  DDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR
        D SRR+L Q          +Y++Y A+++N++PC +RG SYY +C +  +ANPY RGC+ IT C R
Subjt:  DDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 41.3e-1468.75Show/hide
Query:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARF
        RY+ YDALKKNN+PC +RG SYY DC KR++ NPYRRGC+AIT C R+
Subjt:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARF

AT2G33775.1 ralf-like 198.7e-1462.75Show/hide
Query:  RNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFT
        R  Y++Y AL+KNN+PC +RG SYY DC KR++ANPYRRGC+ IT C R T
Subjt:  RNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFT

AT3G05490.1 ralf-like 222.0e-1043.94Show/hide
Query:  DDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR
        D SRR+L Q          +Y++Y A+++N++PC +RG SYY +C +  +ANPY RGC+ IT C R
Subjt:  DDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR

AT3G16570.1 rapid alkalinization factor 231.2e-1057.45Show/hide
Query:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR
        RY++Y AL++N IPC +RG SYY +C +  +ANPY RGC+AIT C R
Subjt:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR

AT4G15800.1 ralf-like 333.4e-1053.19Show/hide
Query:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR
        +Y++Y AL++N +PC +RG SYY +C +  +ANPY RGC+AIT C R
Subjt:  RYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCGCGAAGCTTGGCCTATTTCTCCTCTTCATCGCCATCGTTGTTCCCAACAATTGGGCCCGTGTCTACGGTGCACCCGATTACGCCGTCTGGAGCTCATCCAC
AACAGCGATCGACGACAGCCGGCGGCTACTCTTCCAATATGGATTTGCTTACAAATACCCAAGAAATAGGTATTTGACCTACGATGCACTTAAGAAGAACAATATCCCTT
GCGGCCAACGTGGTACCTCTTACTATGATGACTGCACGAAACGCCAAAAGGCTAACCCTTACCGCCGTGGCTGCACCGCCATCACCGGATGCGCTCGATTCACCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGCGCGAAGCTTGGCCTATTTCTCCTCTTCATCGCCATCGTTGTTCCCAACAATTGGGCCCGTGTCTACGGTGCACCCGATTACGCCGTCTGGAGCTCATCCAC
AACAGCGATCGACGACAGCCGGCGGCTACTCTTCCAATATGGATTTGCTTACAAATACCCAAGAAATAGGTATTTGACCTACGATGCACTTAAGAAGAACAATATCCCTT
GCGGCCAACGTGGTACCTCTTACTATGATGACTGCACGAAACGCCAAAAGGCTAACCCTTACCGCCGTGGCTGCACCGCCATCACCGGATGCGCTCGATTCACCGATTAA
Protein sequenceShow/hide protein sequence
MGSAKLGLFLLFIAIVVPNNWARVYGAPDYAVWSSSTTAIDDSRRLLFQYGFAYKYPRNRYLTYDALKKNNIPCGQRGTSYYDDCTKRQKANPYRRGCTAITGCARFTD