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Lsi09G014230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein SRC2-like
Genome locationchr09:22228950..22229504
RNA-Seq ExpressionLsi09G014230
SyntenyLsi09G014230
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575060.1 hypothetical protein SDJN03_25699, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6575.4Show/hide
Query:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYA-P
        MESSTTS K+N KP A  PTRGIG+PPEVYPPPP+YGGGY PAGYAPP PMPGYGG+PSPPPPYGA+P PYNTGPY   PQAYGYPHHPPP PAY Y  P
Subjt:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYA-P

Query:  PPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTIG
        PPGY PA NAPT  KKK G SK+LG+GAGL+GGVVGGLLLG+ AAD GAA PSFELFS+ TGGG D   +A MQS +DS++ LGTIG
Subjt:  PPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTIG

XP_022959345.1 protein SRC2-like [Cucurbita moschata]2.6e-6574.87Show/hide
Query:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYA-P
        MESSTTS K+N KP A  PTRGIG+PPEVYPPPP+YGGGY P+GYAPP PMPGYGG+PSPPPPYGA+P PYNTGPY   PQAYGYPHHPPP PAY Y  P
Subjt:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYA-P

Query:  PPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTIG
        PPGY PA NAPT  KKK GMSK+LG+GAGL+GGVVGGLLLG+ AAD GAA PSFE FS+ TGGG D   +A MQS +DS++ LGTIG
Subjt:  PPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTIG

XP_023006250.1 polyadenylation factor subunit 2-like [Cucurbita maxima]7.7e-6574.87Show/hide
Query:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPP
        ME STTS K+N KP A+ PTRGIG+PPEVYPPPP+YGGGY PAGYAPP PMPGYGG+PSPPPPYGA+P PYNTGPY   PQAYGYPHHPPP PAY Y PP
Subjt:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPP

Query:  -PGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTIG
         PGY PA NAPT  KKK G SK+LG+GAGL+GGVVGGLLLG+ AAD GAA PSFELFS+ TGGG D   +A MQS +DS++ LGTIG
Subjt:  -PGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTIG

XP_023548312.1 formin-like protein 20 [Cucurbita pepo subsp. pepo]8.5e-6474.73Show/hide
Query:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYA-P
        MESSTTS K N KP A+ PTRGIG+PPE YPPPP+YGGGY PAGYAPP PMPGYGG+PSPPPPYGA+P PYNTGPY   PQAYGYPHHPPP PAY Y  P
Subjt:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYA-P

Query:  PPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTI
        PPGY PA NAPT  KKK G SK+LG+GAGL+GGVVGGLLLG+ AAD GAA PSFELFS+ TGGG D   +A MQS +DS++ LGTI
Subjt:  PPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTI

XP_038875072.1 formin-like protein 20 [Benincasa hispida]1.8e-6678.92Show/hide
Query:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPP
        MESSTTS K+NEKPTAA PTRG      VYPPPPHYGGG+ PAGYAPP PMPGYGGH SPPPPY  FP PYN GPYTPPPQ YGYPHHPPP PAYGYAPP
Subjt:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPP

Query:  PGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPT-GGGMDYNASMQSCNDSMNTLGTIG
        PG  PA NAPT KKKK+GMSKILGMGAGL    VGGLLLGELAADGGA  PSF+LFS+PT GGG+DY+ASMQS +DSM+ LGTIG
Subjt:  PGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPT-GGGMDYNASMQSCNDSMNTLGTIG

TrEMBL top hitse value%identityAlignment
A0A1R3G6K2 C2 calcium-dependent membrane targeting4.0e-1139.61Show/hide
Query:  TAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPPP--GYLPAANAPTK
        +++ P      PP  YPPPP  G GY P     P+P  GYGG+P                P  PPP  YGY   PPP P YGY PP   GY P    P K
Subjt:  TAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPPP--GYLPAANAPTK

Query:  KKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY
        K  K GM    G+GAGL+GG +GGLL+G++ +D  +    ++      GGG D+
Subjt:  KKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY

A0A6J1CB10 protein SRC2-like1.0e-2249.14Show/hide
Query:  ENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPPPGYLPAANA
        E +KP AA  TRGIG PPE YPPPPH   GY                   PPPP    P PYNTG   PPPQ YGYPH+  PAP     PPPGYLPAA  
Subjt:  ENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPPPGYLPAANA

Query:  PTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDYNASMQSCNDSMNTLGTIG
          KK+ K+GM KIL +GAG++GG+  G +LGE AAD G  PPS     + +G G  + ++  S   S NTLG IG
Subjt:  PTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDYNASMQSCNDSMNTLGTIG

A0A6J1H610 protein SRC2-like1.3e-6574.87Show/hide
Query:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYA-P
        MESSTTS K+N KP A  PTRGIG+PPEVYPPPP+YGGGY P+GYAPP PMPGYGG+PSPPPPYGA+P PYNTGPY   PQAYGYPHHPPP PAY Y  P
Subjt:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYA-P

Query:  PPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTIG
        PPGY PA NAPT  KKK GMSK+LG+GAGL+GGVVGGLLLG+ AAD GAA PSFE FS+ TGGG D   +A MQS +DS++ LGTIG
Subjt:  PPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTIG

A0A6J1KZM6 polyadenylation factor subunit 2-like3.7e-6574.87Show/hide
Query:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPP
        ME STTS K+N KP A+ PTRGIG+PPEVYPPPP+YGGGY PAGYAPP PMPGYGG+PSPPPPYGA+P PYNTGPY   PQAYGYPHHPPP PAY Y PP
Subjt:  MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPP

Query:  -PGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTIG
         PGY PA NAPT  KKK G SK+LG+GAGL+GGVVGGLLLG+ AAD GAA PSFELFS+ TGGG D   +A MQS +DS++ LGTIG
Subjt:  -PGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY--NASMQSCNDSMNTLGTIG

A0A6N2K885 C2 domain-containing protein3.1e-1142.6Show/hide
Query:  EKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTG-PYTPPPQ-AYGYPHHPPPAPAYGYAPPPGY------
        E   AA  T     P   Y   P  G    P    PP+P PGY G+P PPPPYG +P P   G  Y PPPQ  YGYP  PPP P YGY PPPGY      
Subjt:  EKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTG-PYTPPPQ-AYGYPHHPPPAPAYGYAPPPGY------

Query:  ------LPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY
               P      +KK K GM    G+GAGL+GG VGGLL+G++ +D  +    F+      GGG D+
Subjt:  ------LPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G16510.1 Calcium-dependent lipid-binding (CaLB domain) family protein4.7e-0432.45Show/hide
Query:  ADPTRGIGYPPEVYPPPPHYGGGY--RPAGYAPPLPMPGYGGHPSP-----PPPYGAFPQP-----YNTGP------YTP--PPQAYGYPHHPPPAPAYG
        + P +    PP  YP P  Y   Y  +P    PP P      +P P     PP + ++P P     + T P      + P  P   +GY + PP +P YG
Subjt:  ADPTRGIGYPPEVYPPPPHYGGGY--RPAGYAPPLPMPGYGGHPSP-----PPPYGAFPQP-----YNTGP------YTP--PPQAYGYPHHPPPAPAYG

Query:  YAPPPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGG
        Y  P   +P    P     K G+   LG+GAGL+GG +GGLL+ ++ +D G
Subjt:  YAPPPGYLPAANAPTKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGG

AT5G07740.1 actin binding2.8e-0442Show/hide
Query:  PTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPP---YGAFPQP---------YNTGPYTPPPQAYGYPHHPPPAPAYGYAPPP
        P    P    G PP   PPPP YG     +   PP P PGYG  P PPPP   YG+ P P             P  PPP   G P  PPP P +G APPP
Subjt:  PTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPP---YGAFPQP---------YNTGPYTPPPQAYGYPHHPPPAPAYGYAPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCTCAACGACGTCGTTAAAGGAAAATGAAAAACCGACCGCCGCTGACCCCACCCGAGGAATTGGATATCCACCGGAAGTATATCCTCCACCACCACACTACGG
CGGCGGATACCGACCAGCAGGATATGCTCCGCCACTGCCAATGCCCGGATACGGTGGACATCCGTCGCCACCACCACCCTACGGCGCGTTTCCACAGCCGTACAACACTG
GGCCCTACACTCCACCTCCACAAGCCTACGGTTATCCACATCATCCTCCGCCGGCGCCGGCTTATGGTTATGCTCCGCCGCCAGGATATCTGCCGGCGGCGAACGCTCCA
ACGAAGAAAAAGAAGAAGACAGGGATGAGTAAAATTCTTGGAATGGGAGCGGGGTTGGTCGGCGGAGTTGTCGGAGGGCTTTTGCTCGGCGAATTGGCGGCGGATGGTGG
GGCGGCGCCGCCGTCGTTTGAGTTATTTTCCAATCCCACAGGCGGCGGAATGGATTATAATGCAAGCATGCAATCATGCAATGATAGTATGAATACGCTCGGTACCATTG
GGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCTCAACGACGTCGTTAAAGGAAAATGAAAAACCGACCGCCGCTGACCCCACCCGAGGAATTGGATATCCACCGGAAGTATATCCTCCACCACCACACTACGG
CGGCGGATACCGACCAGCAGGATATGCTCCGCCACTGCCAATGCCCGGATACGGTGGACATCCGTCGCCACCACCACCCTACGGCGCGTTTCCACAGCCGTACAACACTG
GGCCCTACACTCCACCTCCACAAGCCTACGGTTATCCACATCATCCTCCGCCGGCGCCGGCTTATGGTTATGCTCCGCCGCCAGGATATCTGCCGGCGGCGAACGCTCCA
ACGAAGAAAAAGAAGAAGACAGGGATGAGTAAAATTCTTGGAATGGGAGCGGGGTTGGTCGGCGGAGTTGTCGGAGGGCTTTTGCTCGGCGAATTGGCGGCGGATGGTGG
GGCGGCGCCGCCGTCGTTTGAGTTATTTTCCAATCCCACAGGCGGCGGAATGGATTATAATGCAAGCATGCAATCATGCAATGATAGTATGAATACGCTCGGTACCATTG
GGTGA
Protein sequenceShow/hide protein sequence
MESSTTSLKENEKPTAADPTRGIGYPPEVYPPPPHYGGGYRPAGYAPPLPMPGYGGHPSPPPPYGAFPQPYNTGPYTPPPQAYGYPHHPPPAPAYGYAPPPGYLPAANAP
TKKKKKTGMSKILGMGAGLVGGVVGGLLLGELAADGGAAPPSFELFSNPTGGGMDYNASMQSCNDSMNTLGTIG