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Lsi09G014280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein RALF-like 33
Genome locationchr09:22282841..22283224
RNA-Seq ExpressionLsi09G014280
SyntenyLsi09G014280
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575064.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]6.3e-5888.98Show/hide
Query:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+A FA+LAAHFLI +ATA+DFSGD+++LF PTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

XP_022959207.1 protein RALF-like 33 [Cucurbita moschata]2.4e-5788.19Show/hide
Query:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+A FA+LAAHFLI +A A+DFSGD+++LF PTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

XP_023006467.1 protein RALF-like 33 [Cucurbita maxima]4.1e-5788.19Show/hide
Query:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+A FA+LAAHFLIS+ATA+DFSGD+++LF PTKSECRGSI ECFLAGN DDSGFGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

XP_023547686.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo]1.4e-5788.19Show/hide
Query:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+A F +LAAHFLIS+ATA+DFSGD+++LF PTKSECRGSIAECFLAGN+DDSGFGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

XP_038875155.1 protein RALF-like 33 [Benincasa hispida]9.7e-5992.91Show/hide
Query:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVSSLLA  AILAAHFLIS+ATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDS FGMEF MDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGC+AITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

TrEMBL top hitse value%identityAlignment
A0A6J1C9N4 protein RALF-like 331.9e-5285.04Show/hide
Query:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        M ISRVSSLLA FAI AAH L+S+ATA DFSGDHKLL+VP KSECRGSIAEC LAG  DDSGFG EFEMDSEINRRILAT RYISYGAL+ N+VPCSRRG
Subjt:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNC+PGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

A0A6J1EV64 protein RALF-like 336.8e-5079.53Show/hide
Query:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        M ISRV S LA  AI+AAHFL+S+A AVDFSG  KLLFVP +S+CRGSIAECFLAG+D+DS FGMEFEMDSEINRRILA++RY+SYGAL+ N+VPCSRRG
Subjt:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNC+PGAQANPY RGC+AITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

A0A6J1H3W7 protein RALF-like 331.2e-5788.19Show/hide
Query:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+A FA+LAAHFLI +A A+DFSGD+++LF PTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

A0A6J1KG89 protein RALF-like 334.0e-5079.53Show/hide
Query:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        M ISRV S LA  AI+AAHFL+S+A  VDFSGD KLLFVP +S+CRGSIAECFLAG+D+DS FGMEFEMDSEINRRILA +RY+SYGAL+ N+VPCSRRG
Subjt:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNC+PGAQANPY RGC+AITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

A0A6J1KVY0 protein RALF-like 332.0e-5788.19Show/hide
Query:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+A FA+LAAHFLIS+ATA+DFSGD+++LF PTKSECRGSI ECFLAGN DDSGFGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 333.5e-3568.7Show/hide
Query:  VFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQ
        + AIL  HFL +  T+   SGD    FVP +S+C G+IAEC L+  ++      EFEMDSEINRRILATT+YISYGALR NTVPCSRRGASYYNCR GAQ
Subjt:  VFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQ

Query:  ANPYSRGCSAITRCR
        ANPYSRGCSAITRCR
Subjt:  ANPYSRGCSAITRCR

Q945T0 Rapid alkalinization factor3.7e-2957.76Show/hide
Query:  VFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQ
        +  +L   F IS A A D      ++   +   C+GSI EC             EFE+DSE NRRILAT +YISYGAL+ N+VPCSRRGASYYNC+PGAQ
Subjt:  VFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQ

Query:  ANPYSRGCSAITRCRS
        ANPYSRGCSAITRCRS
Subjt:  ANPYSRGCSAITRCRS

Q9LUS7 Rapid alkalinization factor 235.9e-3560.87Show/hide
Query:  GISRVSSLLAVFA---ILAAH--FLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA
        G+SR S   A+FA   ILA H   +  ++ + +F+GD    F P ++ECRG+IAEC ++    D G         G EFEMDSEINRRILAT RYISYGA
Subjt:  GISRVSSLLAVFA---ILAAH--FLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA

Query:  LRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR
        LR NT+PCSRRGASYYNCR GAQANPYSRGCSAITRCR
Subjt:  LRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR

Q9MA62 Protein RALF-like 225.6e-2554.47Show/hide
Query:  AVFAILAAHFLISTATAVDFSGD--HKLLFVPTKSE-----CRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY
        A++A++A   L    +AV+ +GD    L FV   S      C GSIAEC             E E DS+I+RRILA  +YISYGA+R N+VPCSRRGASY
Subjt:  AVFAILAAHFLISTATAVDFSGD--HKLLFVPTKSE-----CRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY

Query:  YNCRPGAQANPYSRGCSAITRCR
        YNC+ GAQANPYSRGCS ITRCR
Subjt:  YNCRPGAQANPYSRGCSAITRCR

Q9SRY3 Protein RALF-like 11.9e-2570.59Show/hide
Query:  SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS
        S C GSIAEC  A          E EMDSEINRRILATT+YISY +L+ N+VPCSRRGASYYNC+ GAQANPYSRGCS I RCRS
Subjt:  SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 11.4e-2670.59Show/hide
Query:  SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS
        S C GSIAEC  A          E EMDSEINRRILATT+YISY +L+ N+VPCSRRGASYYNC+ GAQANPYSRGCS I RCRS
Subjt:  SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS

AT2G33775.1 ralf-like 193.4e-1766.13Show/hide
Query:  MEFEMDSEINRRILATTR-YISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRC
        +++ MDSE NRR LA  R YISYGALR N VPCSRRG SYY+C+   +ANPY RGCS IT C
Subjt:  MEFEMDSEINRRILATTR-YISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRC

AT3G05490.1 ralf-like 224.0e-2654.47Show/hide
Query:  AVFAILAAHFLISTATAVDFSGD--HKLLFVPTKSE-----CRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY
        A++A++A   L    +AV+ +GD    L FV   S      C GSIAEC             E E DS+I+RRILA  +YISYGA+R N+VPCSRRGASY
Subjt:  AVFAILAAHFLISTATAVDFSGD--HKLLFVPTKSE-----CRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY

Query:  YNCRPGAQANPYSRGCSAITRCR
        YNC+ GAQANPYSRGCS ITRCR
Subjt:  YNCRPGAQANPYSRGCSAITRCR

AT3G16570.1 rapid alkalinization factor 234.2e-3660.87Show/hide
Query:  GISRVSSLLAVFA---ILAAH--FLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA
        G+SR S   A+FA   ILA H   +  ++ + +F+GD    F P ++ECRG+IAEC ++    D G         G EFEMDSEINRRILAT RYISYGA
Subjt:  GISRVSSLLAVFA---ILAAH--FLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA

Query:  LRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR
        LR NT+PCSRRGASYYNCR GAQANPYSRGCSAITRCR
Subjt:  LRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR

AT4G15800.1 ralf-like 332.5e-3668.7Show/hide
Query:  VFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQ
        + AIL  HFL +  T+   SGD    FVP +S+C G+IAEC L+  ++      EFEMDSEINRRILATT+YISYGALR NTVPCSRRGASYYNCR GAQ
Subjt:  VFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQ

Query:  ANPYSRGCSAITRCR
        ANPYSRGCSAITRCR
Subjt:  ANPYSRGCSAITRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCTCACGCGTCTCTTCTCTCCTTGCCGTCTTCGCCATTCTCGCCGCTCATTTTCTGATCTCCACAGCGACGGCCGTCGATTTCTCCGGCGACCACAAGCTTCT
CTTCGTTCCGACAAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGTTTTCTCGCCGGAAACGACGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGATTCTGAGATCA
ATCGCCGAATTCTAGCGACTACTCGTTACATAAGCTACGGTGCTCTGAGGAGCAACACCGTTCCTTGCTCTCGTCGCGGCGCTTCTTACTACAACTGTAGACCAGGCGCT
CAGGCGAATCCTTACTCCCGGGGTTGCAGCGCCATTACTCGCTGCCGGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCTCACGCGTCTCTTCTCTCCTTGCCGTCTTCGCCATTCTCGCCGCTCATTTTCTGATCTCCACAGCGACGGCCGTCGATTTCTCCGGCGACCACAAGCTTCT
CTTCGTTCCGACAAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGTTTTCTCGCCGGAAACGACGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGATTCTGAGATCA
ATCGCCGAATTCTAGCGACTACTCGTTACATAAGCTACGGTGCTCTGAGGAGCAACACCGTTCCTTGCTCTCGTCGCGGCGCTTCTTACTACAACTGTAGACCAGGCGCT
CAGGCGAATCCTTACTCCCGGGGTTGCAGCGCCATTACTCGCTGCCGGAGTTAA
Protein sequenceShow/hide protein sequence
MGISRVSSLLAVFAILAAHFLISTATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGA
QANPYSRGCSAITRCRS