CuGenDBv2

Gene ID	Lsi09G014360
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	condensin-2 complex subunit D3
Genome location	chr09:22352843..22354390
RNA-Seq Expression	Lsi09G014360
Synteny	Lsi09G014360
Gene Ontology terms	GO:0007076 - mitotic chromosome condensation (biological process) GO:0010032 - meiotic chromosome condensation (biological process) GO:0000779 - condensed chromosome, centromeric region (cellular component) GO:0005634 - nucleus (cellular component) GO:0042393 - histone binding (molecular function)
InterPro domains	IPR011989 - Armadillo-like helical IPR016024 - Armadillo-type fold IPR026971 - Condensin subunit 1/Condensin-2 complex subunit D3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575071.1 Condensin-2 complex subunit D3, partial [Cucurbita argyrosperma subsp. sororia]

7.8e-240

87.65

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Query:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL
        MEEA+SRILTELEE R F  +T LHSQPPPPLSDSALFDLQSLLDNSIGTD +QP+D LYEDLSAKSLSPSSL RAIASAMD+ S RVSILAS+VYLSLL
Subjt:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL

Query:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD
        LAPNAPVFTLFNPMDFLSFLRSMRR LKQRP+  P+QDDSN+ES APKRKRK  VKGKG  NCA R+SF+G + DGEFDARVLYPVLERL ILMSLIHLD
Subjt:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD

Query:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL
        RFPDSLKSL+ETV DIPVLALEVC+NLSIYSK TNLCSRILSATLRPEHGDL S   EVIKSLSPLIL+HKDQARAFAL FVT+QIAN AKESDGVKSAL
Subjt:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL

Query:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA
        VNLPRYLVQKAPEKSEPR+LAVDSIMEVVKVMEF DQIGFVDYVVKMTRGKSNLRLLA DLIS LI SLSDP+A+DSESELKDSW FGCLVALVQRCSDA
Subjt:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA

Query:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI
         A IRARAL+NLA LVVFLS+NDKNKALLKEVLGSGD HCKKNG+EIHALLRKRCVDEKAAVRKAALFLVTKCT LLGG+MDGDMLKTVGIACSDPLVSI
Subjt:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI

Query:  RKAAMSALSE
        RKAAMSALSE
Subjt:  RKAAMSALSE

KAG7013645.1 Condensin-2 complex subunit D3 [Cucurbita argyrosperma subsp. argyrosperma]

7.8e-240

87.65

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Query:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL
        MEEA+SRILTELEE R F  +T LHSQPPPPLSDSALFDLQSLLDNSIGTD +QP+D LYEDLSAKSLSPSSL RAIASAMD+ S RVSILAS+VYLSLL
Subjt:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL

Query:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD
        LAPNAPVFTLFNPMDFLSFLRSMRR LKQRP+  P+QDDSN+ES APKRKRK  VKGKG  NCA R+SF+G + DGEFDARVLYPVLERL ILMSLIHLD
Subjt:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD

Query:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL
        RFPDSLKSL+ETV DIPVLALEVC+NLSIYSK TNLCSRILSATLRPEHGDL S   EVIKSLSPLIL+HKDQARAFAL FVT+QIAN AKESDGVKSAL
Subjt:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL

Query:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA
        VNLPRYLVQKAPEKSEPR+LAVDSIMEVVKVMEF DQIGFVDYVVKMTRGKSNLRLLA DLIS LI SLSDP+A+DSESELKDSW FGCLVALVQRCSDA
Subjt:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA

Query:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI
         A IRARAL+NLA LVVFLS+NDKNKALLKEVLGSGD HCKKNG+EIHALLRKRCVDEKAAVRKAALFLVTKCT LLGG+MDGDMLKTVGIACSDPLVSI
Subjt:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI

Query:  RKAAMSALSE
        RKAAMSALSE
Subjt:  RKAAMSALSE

XP_023547430.1 condensin-2 complex subunit D3 [Cucurbita pepo subsp. pepo]

3.5e-240

87.84

Show/hide

Query:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL
        MEEA+SRILTELEE R F  +T LHSQPPPPLSDSALFDLQSLLDNSIGTDEQQP+D LYEDLSAKSLSPSSL RAI SAMD+ S R+SILAS+VYLSLL
Subjt:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL

Query:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD
        LAPNAPVFTLFNPMDFLSFLRSMRR LKQRP+  P+QDDSN+ES APKRKRK  VKGKGL NCA R+S +  Y DGEFDARVLYPVLERL ILMSLIHLD
Subjt:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD

Query:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL
        RFPDSLKSL+ETV DIPVLALEVCTNLSIYSK TNLCSRILSATLRPEHGDL S   EVIKSLSPLIL+HKDQARAFAL FVT+QIAN AKESDGVKSAL
Subjt:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL

Query:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA
        VNLPRYLVQKAPEKSEPR+LAVDSIMEVVKVMEF DQIGFVDYVVKMTRGKSNLRLLA DLIS LI SLSDP+A+DSESELKDSW FGCLVALVQRCSDA
Subjt:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA

Query:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI
         A IRARAL+NLA LVVFLS+NDKNKALLKEVLGSGD HCKKNG EIHALLRKRCVDEKAAVRKAALFLVTKCT LLGG+MDGDMLKTVGIACSDPLVSI
Subjt:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI

Query:  RKAAMSALSE
        RKAAMSALSE
Subjt:  RKAAMSALSE

XP_038874590.1 condensin-2 complex subunit D3 isoform X1 [Benincasa hispida]

5.2e-244

90.82

Show/hide

Query:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL
        MEEAISRILTELEE+R          QPPPPLSDSALFDLQ+LLDNSIGTDEQQP+D LYEDLSAKSLSPS LTRA+ASAMD+SSTR+SILASRVYLSLL
Subjt:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL

Query:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDD-SNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHL
        LAPNAPVFTLFNPMDFLSFLRSMRR LKQRPQAQPD DD SNKE NAPKRKRK  VKGKGL NCALR+SFSG   DGE DARVLYPVLERLEILMSLIHL
Subjt:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDD-SNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHL

Query:  DRFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSA
        DRFPDSLKSLIETV DIPVLALEVCTNLSIYSKFTNLCSRILSATLR EHGDLSST VEVIKSLSPLILNHKDQARAFALGFVT+QIANVAKESDGVKSA
Subjt:  DRFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSA

Query:  LVNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSD
        LVNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVD+VVKMTRGKSNLRLLAVDLI MLITSLSD   IDSESELKDS GFGCLVALVQRCSD
Subjt:  LVNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSD

Query:  ASAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVS
        ASAPIRARALTNLA LVVFL+ENDKNKALL+EVLGSGD HCKKNG EIHALLRKRCVDEKAAVRKAALFL+TKCTTLLGGAMDGDMLKTVGIACSDPLVS
Subjt:  ASAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVS

Query:  IRKAAMSALSEV
        IRKAA SALSEV
Subjt:  IRKAAMSALSEV

XP_038874592.1 condensin-2 complex subunit D3 isoform X2 [Benincasa hispida]

5.2e-244

90.82

Show/hide

Query:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL
        MEEAISRILTELEE+R          QPPPPLSDSALFDLQ+LLDNSIGTDEQQP+D LYEDLSAKSLSPS LTRA+ASAMD+SSTR+SILASRVYLSLL
Subjt:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL

Query:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDD-SNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHL
        LAPNAPVFTLFNPMDFLSFLRSMRR LKQRPQAQPD DD SNKE NAPKRKRK  VKGKGL NCALR+SFSG   DGE DARVLYPVLERLEILMSLIHL
Subjt:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDD-SNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHL

Query:  DRFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSA
        DRFPDSLKSLIETV DIPVLALEVCTNLSIYSKFTNLCSRILSATLR EHGDLSST VEVIKSLSPLILNHKDQARAFALGFVT+QIANVAKESDGVKSA
Subjt:  DRFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSA

Query:  LVNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSD
        LVNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVD+VVKMTRGKSNLRLLAVDLI MLITSLSD   IDSESELKDS GFGCLVALVQRCSD
Subjt:  LVNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSD

Query:  ASAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVS
        ASAPIRARALTNLA LVVFL+ENDKNKALL+EVLGSGD HCKKNG EIHALLRKRCVDEKAAVRKAALFL+TKCTTLLGGAMDGDMLKTVGIACSDPLVS
Subjt:  ASAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVS

Query:  IRKAAMSALSEV
        IRKAA SALSEV
Subjt:  IRKAAMSALSEV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C933 condensin-2 complex subunit D3

2.7e-230

86.67

Show/hide

Query:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL
        MEEAISRIL ELEE+RHF D+TTLHS   PPLS+SALFDLQ+LLDNSI TDEQQP+D LYEDLSAKSLS SSLTR IASAMD+SSTRVSILAS VYLSLL
Subjt:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL

Query:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD
        LAPNAPVFTLFNPMDFLSFLR MRR LKQRPQ Q DQDDSNKES+APKRKRKA VKGKGL     R+S SGRYDDGE DARVLYP+LERLEILMSLIHLD
Subjt:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD

Query:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL
        RFPDSLKSLIETV DIPVL LE+CTNLSIYSKFT  CSRILSA LRPEHGDLS T VEVIKSL+P ILNHK+QARAFAL FVT+QI  VAKESDGVKSAL
Subjt:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL

Query:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA
        VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVME PDQIGFVDYVVKMTRGKSNLRLLAVDLISMLI SLSDPM IDSE ELKDSW FGCLVALVQRCSDA
Subjt:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA

Query:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI
        SAPIRARALTNLA LVVFLSENDKNKAL+KE+LG G+        EI  LLRKRCVDEKAAVRKAALFLVTKCTT+LGGAMDGD+LKTVGIACSDPLVSI
Subjt:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI

Query:  RKAAMSALSE
        RKAAMSALSE
Subjt:  RKAAMSALSE

A0A2I4DSX7 condensin-2 complex subunit D3 isoform X1

1.5e-159

61.09

Show/hide

Query:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL
        ME + SRI+TELEE+R+  + T   SQ P PLS+  L DLQ+LLD ++ +++ + +D LY+DL++KSLSP+ L   IA+AMD     +S+LAS+VYLSLL
Subjt:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL

Query:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQA-QPDQDDSNKESNAPKRKRKAAVK-GKGLGNCALRKSFSGRYD--DGEFDARVLYPVLERLEILMSL
        L+PNAPVFTLF PM FLS L S+RR LK+RPQ  QPD + S+  +N   RKRK   K GKGL N A R S+S R D  +GEFD R L+PVLE LE+ M L
Subjt:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQA-QPDQDDSNKESNAPKRKRKAAVK-GKGLGNCALRKSFSGRYD--DGEFDARVLYPVLERLEILMSL

Query:  IHLDRFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGV
        IHLDRFPDSLKSL++TV+++PV+A+E+C N   Y++ T+LCSRILS  LRPEHG+ + T  EV+KSLSPLIL  K QAR FALGF+T Q+ ++AK  +GV
Subjt:  IHLDRFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGV

Query:  KSALVNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQR
        K A+VNLPRYL QKAPEKSEPR+LAV+SIME+VKVMEF DQIGFV+YVVKMT+GK+NLRLLAVDLI ML+T+L DP  +D + E+KDSWG  C+ A++ R
Subjt:  KSALVNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQR

Query:  CSDASAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDP
        CSD +A IRARAL+NLAQLV FL+ +++++A+L+EV+G G+   ++    ++ LLRKRC+DEKAAVRKAAL L++K T LL GA+D  +LKT+G++CSDP
Subjt:  CSDASAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDP

Query:  LVSIRKAAMSALSE
        LVSIRKAA+SALSE
Subjt:  LVSIRKAAMSALSE

A0A6J1CAM9 condensin-2 complex subunit D3

2.5e-228

83.33

Show/hide

Query:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL
        ME+AISRI+TELE+VRHF D+T LHS PPPPLSDSALFDLQSL DNS GTDEQ+P+D LYEDLSAKSLSPSSL RAIASAMD+ S+R+SILASRVYL L+
Subjt:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL

Query:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD
        LAPNAPVFTLFNPMDFLSFLRS+RRLLK RP+  PD+D+ N+ESNAPKRKRK  VK  GL NC+ R+S +   DDG FDARVLYPVLERLE LM LIHLD
Subjt:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD

Query:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL
        RFPDSLKSL+ETV DIPVLALEVCTNLSIYSK TNLCSRILSATLRPEHGD+++T  EVIKSLSPLIL+HKDQAR FALGFVTVQI NVA ESDGV++AL
Subjt:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL

Query:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA
        VNLPRYLVQKAPEKSEPR LAVDSIMEVVKVMEF DQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDP+A+DS SELKDSWG+ CLVAL+QRCSDA
Subjt:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA

Query:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI
         A IRARAL+NLA LV FLSENDKNKALLKEVLGS   + + +G  I  LLRKRCVDEKAAVRKAALFLVTKCT LL GAMDGDMLKTVGIACSDPLVSI
Subjt:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI

Query:  RKAAMSALSE
        RKAAMSALSE
Subjt:  RKAAMSALSE

A0A6J1H4Z7 condensin-2 complex subunit D3

2.8e-235

86.67

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Query:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL
        MEEA+SRILTELEE R F  +T LHSQPPPPLS+SALF+LQSLLDNSIGTDEQQP+D LYEDLSAKSLSPSSL RAIASAMD+ S RVSILAS+VYLSLL
Subjt:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL

Query:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD
        LAPNAPVFTLFNPMDFLSFLRSMRR LKQRP+  P     N+ES APKRKRK  VKGKGL NCA R+SF+G + DGEFDARVLYPVLERL ILMSLIHLD
Subjt:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD

Query:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL
        RFPDSLKSL+ETV DIPVLALEVC+NLSIYSK TNLCSRILSATLRPEHGDL S   EVIKSLSPLIL+HKDQARAFAL FVT+QIAN AKESDGVKSAL
Subjt:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL

Query:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA
        VNLPRYLVQKAPEKSEPR+LAVDSIMEVVKVMEF DQIGFVDYVVKMTRGKSNLRLLA DLIS LI SLSDP+A+DSESELKDSW FGCLVALVQRCSDA
Subjt:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA

Query:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI
         A IRARAL+NLA LVVFLS+NDKNKALLKEVLGSGD HCKKNG EIHA LRKRCVDEKAAVRKAALFLVTKCT LLGG+MDGDMLKTVGIACSDPLVSI
Subjt:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI

Query:  RKAAMSALSE
        RKAAM ALSE
Subjt:  RKAAMSALSE

A0A6J1L4I0 condensin-2 complex subunit D3

1.4e-239

87.25

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Query:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL
        MEEA+SRILTELEE R+   +T LHSQPPPPLSDSALFDLQSLLDNSIGTDEQQP+  LYEDLSAKSLSPS L RAIASAMD+ S R+SILAS+VYLSLL
Subjt:  MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLL

Query:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD
        LAPNAPVFTLFNPMDFLSFLRSMRR LKQRP+  P+QDDSN+ES APKRKRK  VKGKGL NCA R+SF+G + DGE DARVLYPVLERL ILMSLIHLD
Subjt:  LAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLD

Query:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL
        RFPDSLKSL+ETV DIPVLA EVCTNLSIYSK TNLCSRILSATLRPEHGDL S   EVIKSLSPLIL+HKDQARAFAL FVT+QIAN AKESDGVKSAL
Subjt:  RFPDSLKSLIETVSDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSAL

Query:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA
        VNLPRYLVQKAPEKSEPR+LAVDSIMEVVKVMEF DQIGFVDYVVKMTRGKSNLRLLA+DLIS LI SLSDP+A+DSESELKDSW FGCLVALVQRCSDA
Subjt:  VNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDA

Query:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI
         A IRARAL+NLA LVVFLS+NDKNKALLKEVLGSGD HCKKNG EIHALLRKRCVDEKAAVRKAALFLVTKCT LLGG+MDGDMLKTVGIACSDPLVSI
Subjt:  SAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSI

Query:  RKAAMSALSE
        RKAAMSALSE
Subjt:  RKAAMSALSE

SwissProt top hits

e value

%identity

Alignment

Q6ZQK0 Condensin-2 complex subunit D3

1.9e-07

20.26

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Query:  TDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTR--------VSILASRVYLSLLLAPNAPVFTLFNPMDFLSFLRSMRRLLKQR----PQAQPDQ
        TDE   ++ ++   +   +S ++L       + ++  +          + A+ +Y  LL  P   V  +F+P+ F   ++ ++R   Q      + + D 
Subjt:  TDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTR--------VSILASRVYLSLLLAPNAPVFTLFNPMDFLSFLRSMRRLLKQR----PQAQPDQ

Query:  DDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDAR-------VLYPVLERLEILMSLIHLDRFPDSLKSLIE------TVSDIP-VLALEV
          S+K++    RKR    + +      L +      ++  F  R        ++ +L+    L+    L   P S+++ IE      +   IP    +  
Subjt:  DDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDAR-------VLYPVLERLEILMSLIHLDRFPDSLKSLIE------TVSDIP-VLALEV

Query:  CTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVI-KSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSALVN------------LPRYLVQK
          NL+     + L    L     P HG+ +     +  + L+ +++    +    A   +T Q+ N   ++    S+LV+            L +++  K
Subjt:  CTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVI-KSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSALVN------------LPRYLVQK

Query:  APEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTR-GKSNLRLLAVDLISMLIT----SLSDPMAIDSESELKDSWGFGCLVALVQRCSDASAPIR
          +K+E R+ A  S+++++  +   +   F+ ++ K +R  K   R+  +D+   L+T     L D ++++ +  LK    F     +  RC D +  +R
Subjt:  APEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTR-GKSNLRLLAVDLISMLIT----SLSDPMAIDSESELKDSWGFGCLVALVQRCSDASAPIR

Query:  ARALTNLAQLVVFLSENDKNKAL-------------------------LKEVLGSGDEHCKKNGDE--------IHALLRKRCVDEKAAVRKAAL----F
        ++AL++ A  +   S N     L                         L    G   +    N DE           +LRKR  DEK  VRK+AL     
Subjt:  ARALTNLAQLVVFLSENDKNKAL-------------------------LKEVLGSGDEHCKKNGDE--------IHALLRKRCVDEKAAVRKAAL----F

Query:  LVTKCTTLLGGAMDGDMLKTVGIACSDPLVSIRKAAMSALSEV
        ++  C  L   +M+ D+L  +   C DP +S+RK A+ +L+E+
Subjt:  LVTKCTTLLGGAMDGDMLKTVGIACSDPLVSIRKAAMSALSEV

Arabidopsis top hits

e value

%identity

Alignment

AT4G15890.1 binding

1.6e-118

50.94

Show/hide

Query:  DLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDD--SSTRVSILASRVYLSLLLAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPD
        DL+SLLD    TD+ + ++  Y  LS+ +   SS  R I++AMD    S R++ILAS  YLSLLL+ N PVFT F+P+ FLS L S+RR LK+R      
Subjt:  DLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDD--SSTRVSILASRVYLSLLLAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPQAQPD

Query:  QDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGE------FDARVLYPVLERLEILMSLIHLDRFPDSLKSLIETVSDIPVLALEVCTNLSIY
         D + + SN+ + K     +G+G  N          Y+DGE      FDA++++ VLE+L  ++S +HLDRFPDSLKSL++TVS+IP+LALE    L+ Y
Subjt:  QDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGE------FDARVLYPVLERLEILMSLIHLDRFPDSLKSLIETVSDIPVLALEVCTNLSIY

Query:  SKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSALVNLPRYLVQKAPEKSEPRSLAVDSIMEVVK
         +   +C +IL   L  +HGD++ T  E+ KSL+PL+L  K QAR+FALGFV+ ++ ++AK++  +K  + NLP++LV KAPEK+EPR  AV++++E+VK
Subjt:  SKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSALVNLPRYLVQKAPEKSEPRSLAVDSIMEVVK

Query:  VMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMA-IDSESELKDSWGFGCLVALVQRCSDASAPIRARALTNLAQLVVFLSENDKNKALL
         ME   Q  FVD+V+KM +GKSN R+LAVD+I +LI+SL +P+  I SE+ LKDSWG GC+ ALVQRCSD SA IRARAL+NLAQ+V FLS +++++++L
Subjt:  VMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMA-IDSESELKDSWGFGCLVALVQRCSDASAPIRARALTNLAQLVVFLSENDKNKALL

Query:  KEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSIRKAAMSALSE
        K+ LG   E  +  G  +  LL+KRCVDEKAAVR+AAL LVTK T+L+GG  DG +LKT+G +CSDPL+SIRKAA+SA+SE
Subjt:  KEVLGSGDEHCKKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSIRKAAMSALSE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGAAGCCATTTCTCGAATCCTCACAGAGCTCGAAGAAGTTCGCCATTTCCACGACACTACAACTCTCCATTCCCAACCTCCGCCGCCGCTCTCCGACTCCGCTCT
CTTCGACCTTCAAAGCTTGTTAGACAACTCAATCGGTACCGATGAACAACAACCAATTGATTGCCTCTACGAGGACCTCTCGGCCAAATCCCTCTCTCCGTCCTCTCTTA
CCCGCGCTATTGCCTCCGCCATGGATGATTCTTCCACTCGCGTTTCGATTTTAGCCTCTAGAGTCTATCTCTCCCTTCTTCTGGCCCCAAATGCACCGGTCTTCACGCTG
TTCAATCCGATGGATTTTCTCTCCTTTCTCAGGTCTATGAGGCGACTCTTGAAGCAGCGACCACAGGCTCAACCGGACCAGGATGATTCTAATAAGGAGTCTAATGCTCC
CAAACGGAAGAGGAAAGCCGCTGTTAAGGGTAAGGGTTTGGGGAATTGTGCGCTGAGGAAGAGTTTTAGTGGCAGATATGACGATGGTGAATTCGATGCAAGAGTATTGT
ATCCTGTGCTTGAGAGGTTAGAGATTTTAATGAGTTTGATTCATTTGGATCGATTTCCGGATAGTTTGAAATCTTTGATTGAAACTGTAAGTGATATTCCAGTTTTGGCA
CTTGAAGTATGCACTAATTTAAGTATCTATAGTAAGTTTACTAATTTATGTTCTCGGATTTTGAGTGCTACATTGCGTCCTGAGCATGGGGATCTATCGAGTACTACCGT
TGAGGTGATTAAGTCTCTGTCACCATTGATTCTTAATCATAAAGATCAGGCGCGAGCATTTGCGCTAGGTTTTGTGACTGTTCAAATAGCGAATGTAGCAAAGGAATCAG
ATGGTGTTAAGAGTGCTCTGGTGAATCTTCCAAGGTATTTGGTTCAGAAGGCGCCTGAGAAATCCGAGCCCCGTAGTTTAGCAGTTGATTCAATAATGGAGGTTGTTAAA
GTGATGGAATTCCCCGATCAAATTGGGTTTGTGGATTATGTAGTGAAGATGACCCGAGGAAAGTCTAATCTTAGGCTGTTAGCGGTTGATCTCATTTCAATGCTGATAAC
GTCCTTGAGTGATCCAATGGCCATTGATTCGGAAAGCGAACTAAAGGATTCGTGGGGATTTGGGTGCTTGGTGGCATTAGTTCAACGTTGTTCGGATGCCAGTGCTCCAA
TTCGTGCTCGAGCACTTACCAACTTAGCTCAGCTTGTGGTGTTCTTGTCTGAGAATGACAAGAATAAGGCCTTATTGAAGGAAGTGTTGGGGTCTGGTGACGAACATTGC
AAAAAGAATGGAGATGAAATTCATGCTCTTTTGCGAAAAAGGTGTGTGGATGAGAAGGCGGCAGTTAGGAAGGCTGCATTATTTCTGGTTACCAAGTGTACAACTCTCCT
TGGTGGAGCAATGGATGGAGATATGCTGAAGACGGTGGGAATTGCTTGTTCTGACCCACTTGTTAGCATACGGAAAGCTGCAATGTCGGCTCTCTCAGAGGTAAATTCTT
ATGTCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEEAISRILTELEEVRHFHDTTTLHSQPPPPLSDSALFDLQSLLDNSIGTDEQQPIDCLYEDLSAKSLSPSSLTRAIASAMDDSSTRVSILASRVYLSLLLAPNAPVFTL
FNPMDFLSFLRSMRRLLKQRPQAQPDQDDSNKESNAPKRKRKAAVKGKGLGNCALRKSFSGRYDDGEFDARVLYPVLERLEILMSLIHLDRFPDSLKSLIETVSDIPVLA
LEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTTVEVIKSLSPLILNHKDQARAFALGFVTVQIANVAKESDGVKSALVNLPRYLVQKAPEKSEPRSLAVDSIMEVVK
VMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDASAPIRARALTNLAQLVVFLSENDKNKALLKEVLGSGDEHC
KKNGDEIHALLRKRCVDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSIRKAAMSALSEVNSYV

Lsi09G014360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome