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Lsi09G014420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDynein light chain
Genome locationchr09:22410598..22413107
RNA-Seq ExpressionLsi09G014420
SyntenyLsi09G014420
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013650.1 Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]9.2e-6486.27Show/hide
Query:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL
        MSNDAKRSIQGN MVKS+SEDRKP AVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG       V 
Subjt:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL

Query:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
        VF FEL T SMKV Q NGK  LP PGSSYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

XP_004150499.1 dynein light chain 1, cytoplasmic [Cucumis sativus]2.6e-5072.55Show/hide
Query:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL
        MSNDAKRSIQG  +VKS+SEDRKPPAV TTGKKIVIKSADMFGDVQK+AIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL

Query:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                                   SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

XP_008458417.1 PREDICTED: dynein light chain 1, cytoplasmic [Cucumis melo]3.1e-5173.86Show/hide
Query:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL
        MSNDAKRSIQGN MVKS+SEDRKPPAV  TGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL

Query:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                                   SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

XP_023513722.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo]4.4e-5072.55Show/hide
Query:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL
        MSNDAKRSIQGNQMVKS+SEDRKP AVATTGKKIVIKSADMFGDVQKEA+DVAI AFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL

Query:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                                   SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

XP_038906782.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]8.1e-5274.51Show/hide
Query:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL
        MSNDAKRSIQGN MVKS+SEDRKPPAVATTGKKIVIKSADMFGDVQKEAI+VAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL

Query:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                                   SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

TrEMBL top hitse value%identityAlignment
A0A0A0KCI4 Dynein light chain1.3e-5072.55Show/hide
Query:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL
        MSNDAKRSIQG  +VKS+SEDRKPPAV TTGKKIVIKSADMFGDVQK+AIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL

Query:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                                   SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

A0A1S3C7T8 Dynein light chain1.5e-5173.86Show/hide
Query:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL
        MSNDAKRSIQGN MVKS+SEDRKPPAV  TGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL

Query:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                                   SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

A0A6J1EQC6 Dynein light chain4.8e-5071.9Show/hide
Query:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL
        MSNDAKRSIQGNQMVK++SEDRKP AVATTGKKIVIKSADMFGDVQKEA+DVAI AFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL

Query:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                                   SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

A0A6J1H8A5 Dynein light chain4.8e-5073.2Show/hide
Query:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL
        MSNDAKRSIQGN MVKS+SEDRKP AVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL

Query:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                                   SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

A0A6J1KH59 Dynein light chain6.3e-5071.24Show/hide
Query:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL
        MSNDAKRSIQGNQMVK++SEDRKP AVATTGKKIVIKSADMFGDVQKEA+D+AI AFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG         
Subjt:  MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVL

Query:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                                   SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic3.9e-2550Show/hide
Query:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVT
        +K VIK+ADM  D+Q++AID A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFG                                    SYVT
Subjt:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVT

Query:  HETNHFVYFYLDQKAVLLFKSG
        HET HF+YFYL Q A+LLFKSG
Subjt:  HETNHFVYFYLDQKAVLLFKSG

Q3MHR3 Dynein light chain 2, cytoplasmic6.7e-2549.18Show/hide
Query:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVT
        +K VIK+ADM  D+Q++A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFG                                    SYVT
Subjt:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVT

Query:  HETNHFVYFYLDQKAVLLFKSG
        HET HF+YFYL Q A+LLFKSG
Subjt:  HETNHFVYFYLDQKAVLLFKSG

Q78P75 Dynein light chain 2, cytoplasmic6.7e-2549.18Show/hide
Query:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVT
        +K VIK+ADM  D+Q++A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFG                                    SYVT
Subjt:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVT

Query:  HETNHFVYFYLDQKAVLLFKSG
        HET HF+YFYL Q A+LLFKSG
Subjt:  HETNHFVYFYLDQKAVLLFKSG

Q96FJ2 Dynein light chain 2, cytoplasmic6.7e-2549.18Show/hide
Query:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVT
        +K VIK+ADM  D+Q++A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFG                                    SYVT
Subjt:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVT

Query:  HETNHFVYFYLDQKAVLLFKSG
        HET HF+YFYL Q A+LLFKSG
Subjt:  HETNHFVYFYLDQKAVLLFKSG

Q9D0M5 Dynein light chain 2, cytoplasmic6.7e-2549.18Show/hide
Query:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVT
        +K VIK+ADM  D+Q++A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFG                                    SYVT
Subjt:  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVT

Query:  HETNHFVYFYLDQKAVLLFKSG
        HET HF+YFYL Q A+LLFKSG
Subjt:  HETNHFVYFYLDQKAVLLFKSG

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein1.2e-0834.83Show/hide
Query:  KDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKS
        K +A  +KK+FD  +GP WHCIVG +FG                                    SYVTH T  F+YF +D+  VLLFK+
Subjt:  KDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKS

AT1G52240.2 RHO guanyl-nucleotide exchange factor 114.5e-0841.03Show/hide
Query:  KIVIKSADMFGDVQKEAIDVAIAAFEKHSVE--KDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELET
        K +++ +DM   +Q +A+  A  A +   V   K IA  IKKEFD+R+G  W C+VG NFG F    K     F+LET
Subjt:  KIVIKSADMFGDVQKEAIDVAIAAFEKHSVE--KDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELET

AT3G16120.1 Dynein light chain type 1 family protein2.5e-0637.18Show/hide
Query:  KIVIKSADMFGDVQKEAIDVAIAAFEKHSV--EKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELET
        K  ++  DM   +Q +A+ +A  + +   V     IA  IKKEFD+R+G  W C+VG NFG F    K     F L T
Subjt:  KIVIKSADMFGDVQKEAIDVAIAAFEKHSV--EKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELET

AT4G15930.1 Dynein light chain type 1 family protein7.3e-3552.87Show/hide
Query:  KRSIQGNQMVKSMSEDRK---------PPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVS
        K+S+ G    +++ +DR+         PPA    GK+ VIKSADM  D+QKEAI++AI+AFEK+SVEKDIAE IKKEFDK+HG TWHCIVGRNFG     
Subjt:  KRSIQGNQMVKSMSEDRK---------PPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVS

Query:  VKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG
                                       SYVTHETNHFVYFYLDQKAVLLFKSG
Subjt:  VKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG

AT5G20110.1 Dynein light chain type 1 family protein1.1e-0935.83Show/hide
Query:  IKSADMFGDVQKEAIDVA---IAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVTH
        I +ADM G +Q  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FG                                    S+VTH
Subjt:  IKSADMFGDVQKEAIDVA---IAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSSMKVKQTNGKGPLPVPGSSYVTH

Query:  ETNHFVYFYLDQKAVLLFKS
         T  F+YF +D+  VLLFK+
Subjt:  ETNHFVYFYLDQKAVLLFKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAATGATGCTAAGAGAAGCATTCAAGGGAATCAAATGGTGAAATCTATGTCGGAAGATCGGAAACCACCGGCTGTGGCTACTACCGGCAAGAAAATCGTTATCAA
GAGTGCTGATATGTTTGGTGATGTGCAGAAGGAGGCTATCGATGTCGCCATAGCTGCATTTGAAAAACATAGTGTAGAGAAGGATATAGCAGAGTGTATTAAGAAAGAGT
TCGATAAGAGGCATGGACCGACCTGGCACTGCATTGTTGGCCGTAATTTTGGTTGGTTTAACGTCTCTGTCAAAGTTTTAGTTTTCTGTTTTGAGTTGGAAACCTCATCA
ATGAAGGTCAAGCAGACTAATGGAAAAGGGCCCCTTCCTGTCCCAGGGAGTTCGTACGTGACACACGAGACAAACCACTTTGTTTACTTCTACTTGGATCAGAAAGCAGT
TTTATTGTTCAAATCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
CGGCTCCATTAAAGACCAGATTGCAAAAAGCCGCAAATGAATTCCAGAAAGAGTTAAAATCGTTTATCCTCTCAGATTCTGAAAGAACTCACGAGCTTTGCTTACAATTT
CCGCTCAAACCGATGAAGTAATTCCAAATTTCTTCAAACGAAAAAACTTGTACAGATTGCAAAAATTGTTACTACCGAATCGGCACCGGAGATCAGAGAAGAAGCAGCAG
GAAAAAAAATGAGTAATGATGCTAAGAGAAGCATTCAAGGGAATCAAATGGTGAAATCTATGTCGGAAGATCGGAAACCACCGGCTGTGGCTACTACCGGCAAGAAAATC
GTTATCAAGAGTGCTGATATGTTTGGTGATGTGCAGAAGGAGGCTATCGATGTCGCCATAGCTGCATTTGAAAAACATAGTGTAGAGAAGGATATAGCAGAGTGTATTAA
GAAAGAGTTCGATAAGAGGCATGGACCGACCTGGCACTGCATTGTTGGCCGTAATTTTGGTTGGTTTAACGTCTCTGTCAAAGTTTTAGTTTTCTGTTTTGAGTTGGAAA
CCTCATCAATGAAGGTCAAGCAGACTAATGGAAAAGGGCCCCTTCCTGTCCCAGGGAGTTCGTACGTGACACACGAGACAAACCACTTTGTTTACTTCTACTTGGATCAG
AAAGCAGTTTTATTGTTCAAATCTGGTTGATAAACATGTATATTATGCAGATTAATGAATCTGTTTAACTGATTTTATGATCATCGCAATTTAATCAAATGATGATATCC
TCGTCTTTGCTTATCTAATGATTTTGCCTAGGATACTGTAGCCTTTAAATTAGTCATAATCAGCTTATCCACCTTTGCAAACAAAGCATTTTGTTCGAAATCATTGAGTT
CAAAAGTAGTTTTCTTTTTCCTC
Protein sequenceShow/hide protein sequence
MSNDAKRSIQGNQMVKSMSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGWFNVSVKVLVFCFELETSS
MKVKQTNGKGPLPVPGSSYVTHETNHFVYFYLDQKAVLLFKSG