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Lsi09G014460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:22438682..22444055
RNA-Seq ExpressionLsi09G014460
SyntenyLsi09G014460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1886595.1 hypothetical protein Lal_00045828 [Lupinus albus]4.1e-0538.6Show/hide
Query:  SHSPIIGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSS-----SKCNP-----RVIEVASENGHELIPPPFQTN
        S SP IG  A V+ +I  S V  LPH  L ++ + + MN    A   ATTA + A  G  APSS        NP      V +  + + H+LIPPP Q N
Subjt:  SHSPIIGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSS-----SKCNP-----RVIEVASENGHELIPPPFQTN

Query:  SKTARNGQLDQHSP
          TAR  +L+Q  P
Subjt:  SKTARNGQLDQHSP
KAG5632929.1 hypothetical protein H5410_004646 [Solanum commersonii]5.7e-0762.71Show/hide
Query:  IGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSS
        +GRT  VSSR S SFVKTLPH  LP+VVS +P  E  KA+P+A   A RA  GRPAPSS
Subjt:  IGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSS
KAG9153141.1 hypothetical protein Leryth_012392 [Lithospermum erythrorhizon]5.7e-0753.25Show/hide
Query:  SHSPIIGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSSSKCNPRVIEVASE
        S SPIIG TA+VSSR S S VKTLPH   P VVS+ P  E  KA  +AT+ A RA  G PAPSS      + E+ +E
Subjt:  SHSPIIGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSSSKCNPRVIEVASE
TrEMBL top hitse value%identityAlignment
A0A0P0YBL1 Os12g0552575 protein6.3e-0454.69Show/hide
Query:  SHSPIIGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSS
        SH+PI G T +VS  I  S V T  H   P VV  SP +EP  A PIATT  + A LGRPAPSS
Subjt:  SHSPIIGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSS
A0A3Q7EFZ7 Uncharacterized protein1.0e-0661.02Show/hide
Query:  IGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSS
        +GRT  VSSR S SFVKTLPH  LP+VVS +P  E   A+P+A   A RA  GRPAPSS
Subjt:  IGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSS
A0A6A5NVA6 Uncharacterized protein2.0e-0538.6Show/hide
Query:  SHSPIIGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSS-----SKCNP-----RVIEVASENGHELIPPPFQTN
        S SP IG  A V+ +I  S V  LPH  L ++ + + MN    A   ATTA + A  G  APSS        NP      V +  + + H+LIPPP Q N
Subjt:  SHSPIIGRTAIVSSRISSSFVKTLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSS-----SKCNP-----RVIEVASENGHELIPPPFQTN

Query:  SKTARNGQLDQHSP
          TAR  +L+Q  P
Subjt:  SKTARNGQLDQHSP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGTGATTCTTTGAGAAATTCAGGACCTTCCTCACGTATGGCTGTGTGGATTGCATGTGCAAAGACACCACTATTAAGATTGAGACCACACATGCCATCTGAGAT
GCCAAAAGCCCGTAGCAAAGACCCACAAAACCAAACTTCCAAACAAACGCCGACAAGACGGCCACCGGCGCCCCCACCATGTAAAATGAACAGAAATTTATTCCTGCTCC
GCTCCCCGGCCTTGCACTTCCCCTCAGAATCCCGCAGCTTGTTCTCGCACAGCCCGATTATAGGCAGAACCGCCATTGTCAGCTCTAGAATTTCCTCATCTTTTGTGAAA
ACTCTTCCCCATGTCCTTCTGCCAATAGTGGTCAGTGAGAGCCCCATGAATGAGCCCACCAAGGCCAATCCAATCGCCACCACCGCCGCCAGTCGAGCCTTTTTGGGCCG
ACCAGCGCCGAGCTCTAGCAAGTGCAATCCGCGGGTTATAGAGGTAGCCAGTGAGAATGGTCATGAACTCATACCACCACCATTCCAAACAAACTCCAAGACAGCTAGGA
ATGGCCAACTTGATCAGCATTCCCCATTCCTCCCCAACCGTGGCGGTGCTAACCACGGTGCTGCTTTTCAGTGGCACAAACAGATTAGCCTCCTTAGAAGAAGAGGAGGA
AAAAGTACTACTGCGAGTGCAGAATATCAAATAGAGGTATTGAAATTAGCTATAAAATTGGAGATAGCAATCCCACGGATTCCAAGATCAAGAGGAAAAGTCAAGAAAAG
AGCGATGGGAACATGTAGGAGAATAGCCAACAAATTGCACCACATAACAAGCCACGTGGTGCCTTTGTTTCTAAGAACCAACATAAGAGGCTCCAAATTTAGCCAAAGAA
ACCCAATTGGAATAGTAGCAAAAAGCAAAATAAGAACCGTTCTTTGCAAACTCTTCAAGGACCTTCAAAAAAGGAGAGAAGACTCCATCAAGTTAGCAAAACAGAATTCG
TACCTCTGGCATTGTCGGGTACTTTTGGGACTTCTCTTCTGCAAGCATATTTTTTCCTTCCTTTGCCCCTTGCTGTTTCTTTTTCCCCTGTGGCTGAGGAAAGATAGAAA
AAAGAGAGAGAGAAGGGAGAAAGCAAAAAGGGCAGCCAAAAGTTTGGTTATACATATTAATCAACACATGCTATTATCTTATAAAGTTAGTGTTATGCACAGCCAATATA
AGTCTAAAGTTGATTTGAAAAGAAAAGAATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGTGATTCTTTGAGAAATTCAGGACCTTCCTCACGTATGGCTGTGTGGATTGCATGTGCAAAGACACCACTATTAAGATTGAGACCACACATGCCATCTGAGAT
GCCAAAAGCCCGTAGCAAAGACCCACAAAACCAAACTTCCAAACAAACGCCGACAAGACGGCCACCGGCGCCCCCACCATGTAAAATGAACAGAAATTTATTCCTGCTCC
GCTCCCCGGCCTTGCACTTCCCCTCAGAATCCCGCAGCTTGTTCTCGCACAGCCCGATTATAGGCAGAACCGCCATTGTCAGCTCTAGAATTTCCTCATCTTTTGTGAAA
ACTCTTCCCCATGTCCTTCTGCCAATAGTGGTCAGTGAGAGCCCCATGAATGAGCCCACCAAGGCCAATCCAATCGCCACCACCGCCGCCAGTCGAGCCTTTTTGGGCCG
ACCAGCGCCGAGCTCTAGCAAGTGCAATCCGCGGGTTATAGAGGTAGCCAGTGAGAATGGTCATGAACTCATACCACCACCATTCCAAACAAACTCCAAGACAGCTAGGA
ATGGCCAACTTGATCAGCATTCCCCATTCCTCCCCAACCGTGGCGGTGCTAACCACGGTGCTGCTTTTCAGTGGCACAAACAGATTAGCCTCCTTAGAAGAAGAGGAGGA
AAAAGTACTACTGCGAGTGCAGAATATCAAATAGAGGTATTGAAATTAGCTATAAAATTGGAGATAGCAATCCCACGGATTCCAAGATCAAGAGGAAAAGTCAAGAAAAG
AGCGATGGGAACATGTAGGAGAATAGCCAACAAATTGCACCACATAACAAGCCACGTGGTGCCTTTGTTTCTAAGAACCAACATAAGAGGCTCCAAATTTAGCCAAAGAA
ACCCAATTGGAATAGTAGCAAAAAGCAAAATAAGAACCGTTCTTTGCAAACTCTTCAAGGACCTTCAAAAAAGGAGAGAAGACTCCATCAAGTTAGCAAAACAGAATTCG
TACCTCTGGCATTGTCGGGTACTTTTGGGACTTCTCTTCTGCAAGCATATTTTTTCCTTCCTTTGCCCCTTGCTGTTTCTTTTTCCCCTGTGGCTGAGGAAAGATAGAAA
AAAGAGAGAGAGAAGGGAGAAAGCAAAAAGGGCAGCCAAAAGTTTGGTTATACATATTAATCAACACATGCTATTATCTTATAAAGTTAGTGTTATGCACAGCCAATATA
AGTCTAAAGTTGATTTGAAAAGAAAAGAATGTTAA
Protein sequenceShow/hide protein sequence
MAGDSLRNSGPSSRMAVWIACAKTPLLRLRPHMPSEMPKARSKDPQNQTSKQTPTRRPPAPPPCKMNRNLFLLRSPALHFPSESRSLFSHSPIIGRTAIVSSRISSSFVK
TLPHVLLPIVVSESPMNEPTKANPIATTAASRAFLGRPAPSSSKCNPRVIEVASENGHELIPPPFQTNSKTARNGQLDQHSPFLPNRGGANHGAAFQWHKQISLLRRRGG
KSTTASAEYQIEVLKLAIKLEIAIPRIPRSRGKVKKRAMGTCRRIANKLHHITSHVVPLFLRTNIRGSKFSQRNPIGIVAKSKIRTVLCKLFKDLQKRREDSIKLAKQNS
YLWHCRVLLGLLFCKHIFSFLCPLLFLFPLWLRKDRKKRERREKAKRAAKSLVIHINQHMLLSYKVSVMHSQYKSKVDLKRKEC