CuGenDBv2

Gene ID	Lsi09G014480
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr09:22466094..22466985
RNA-Seq Expression	Lsi09G014480
Synteny	Lsi09G014480
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004150497.1 uncharacterized protein LOC101220317 [Cucumis sativus]

7.0e-87

91.4

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKW--IHQQNDAA---FH
        MS KSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDS+HFKLQKPISKDDSKN TKKKKKRWWKNAFLFFKWKW  IH QNDAA     
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKW--IHQQNDAA---FH

Query:  DDVHQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
        DDVHQARARAFRASISGPVY+TESRS S+TP RSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRIS+SAPMPIYLVT
Subjt:  DDVHQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

XP_008458411.1 PREDICTED: uncharacterized protein LOC103497835 [Cucumis melo]

1.1e-87

92.43

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKW--IHQQNDAA--FHD
        MS KSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKN TKKKKKRWWKNA LFFKWKW  IH QNDAA   HD
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKW--IHQQNDAA--FHD

Query:  DVHQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
        DVHQARARAFRASISGPVY+TESRS S+TP RSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRIS+SAPMPIYLVT
Subjt:  DVHQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

XP_022930362.1 uncharacterized protein LOC111436831 [Cucurbita moschata]

3.2e-79

85.79

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWIHQQNDAAF--HDDV
        MS+KSPVFPFP EPQHFSDYGFDPQ+DYFQVLEEARKHRRE SRSIDSIHFKLQKPISKDDS     KKKKRWWKNA LFFKWKW+H QNDA F  H DV
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWIHQQNDAAF--HDDV

Query:  HQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
        HQARARAFRASISGPVY+TESRS S TP RSTTRP+SGPLAGTLTPTRK D++IPYLSLRELNMEQQQYR STSA MPIYLVT
Subjt:  HQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

XP_023000154.1 uncharacterized protein LOC111494438 [Cucurbita maxima]

2.4e-79

86.89

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWIHQQNDAAF--HDDV
        MS+KSPVFPFP EPQHFSDYGFDPQIDYFQVLEEARKHRRE SRSIDSIHFKLQKPISKDDS     KKKKRWWKNA LFFKWKWIH QNDA F  H DV
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWIHQQNDAAF--HDDV

Query:  HQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
        HQARARAFRASISGPVY+TESRS S TP RSTTRP+SGPLAGTLTPTRK D++IPYLSLRELNMEQQQYR STSA MPIYLVT
Subjt:  HQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

XP_038875477.1 uncharacterized protein LOC120067919 [Benincasa hispida]

1.0e-90

95.63

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWI-HQQNDAAF-HDDV
        MS KSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNN KKKKKRWWKNAFLFFKWKWI H QNDAAF HDDV
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWI-HQQNDAAF-HDDV

Query:  HQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
        HQARARAFRASISGPVYITESRS STTPYRSTTRPSSGPLAGTLTPTRK DV+IPYLSLRELNMEQQQYRISTSAPMPIYLVT
Subjt:  HQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCH6 Uncharacterized protein

3.4e-87

91.4

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKW--IHQQNDAA---FH
        MS KSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDS+HFKLQKPISKDDSKN TKKKKKRWWKNAFLFFKWKW  IH QNDAA     
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKW--IHQQNDAA---FH

Query:  DDVHQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
        DDVHQARARAFRASISGPVY+TESRS S+TP RSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRIS+SAPMPIYLVT
Subjt:  DDVHQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

A0A1S3C7T3 uncharacterized protein LOC103497835

5.2e-88

92.43

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKW--IHQQNDAA--FHD
        MS KSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKN TKKKKKRWWKNA LFFKWKW  IH QNDAA   HD
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKW--IHQQNDAA--FHD

Query:  DVHQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
        DVHQARARAFRASISGPVY+TESRS S+TP RSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRIS+SAPMPIYLVT
Subjt:  DVHQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

A0A6J1EQ93 uncharacterized protein LOC111436831

1.5e-79

85.79

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWIHQQNDAAF--HDDV
        MS+KSPVFPFP EPQHFSDYGFDPQ+DYFQVLEEARKHRRE SRSIDSIHFKLQKPISKDDS     KKKKRWWKNA LFFKWKW+H QNDA F  H DV
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWIHQQNDAAF--HDDV

Query:  HQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
        HQARARAFRASISGPVY+TESRS S TP RSTTRP+SGPLAGTLTPTRK D++IPYLSLRELNMEQQQYR STSA MPIYLVT
Subjt:  HQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

A0A6J1KJ37 uncharacterized protein LOC111494438

1.2e-79

86.89

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWIHQQNDAAF--HDDV
        MS+KSPVFPFP EPQHFSDYGFDPQIDYFQVLEEARKHRRE SRSIDSIHFKLQKPISKDDS     KKKKRWWKNA LFFKWKWIH QNDA F  H DV
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWIHQQNDAAF--HDDV

Query:  HQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
        HQARARAFRASISGPVY+TESRS S TP RSTTRP+SGPLAGTLTPTRK D++IPYLSLRELNMEQQQYR STSA MPIYLVT
Subjt:  HQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

A0A7J7E0Q9 Uncharacterized protein

1.2e-71

73.33

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWI--------------
        MSNKSP+FP P + +HFSDYGFDPQIDYFQVLEEARKH+R+ SRSIDS+HFKLQKPISKD+S+   K KKK WW+NA LFFKWKW               
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWI--------------

Query:  HQQNDAAFHDDVHQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
        H+  D     DVH+ARA+AFRASISGPVYITESRS S+TPYRST+RPSSGPLAGTLTP+R GD+EIPYLSLRELNMEQQQ+RISTSA MPIYLVT
Subjt:  HQQNDAAFHDDVHQARARAFRASISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06840.1 unknown protein

1.1e-45

58.97

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Query:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRS--IDSIHFKLQKPISKDD----SKNNTKKKKKRWWKNAFLFFKW-KWIHQQNDAA
        MSN SP+F      QHFSDYGFDPQ+ YFQV+EEARKH+RE+S     + + FK+QKPISKD+    + +N KKKK+ WWK A  FFKW KW    +   
Subjt:  MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRS--IDSIHFKLQKPISKDD----SKNNTKKKKKRWWKNAFLFFKW-KWIHQQNDAA

Query:  FHDDVHQARARAFRA-----SISGPVYITESR-SVSTTPYRSTT-RPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT
         ++D    R R FR+     S+SGP+Y TES  S S TPYR+TT +PSSGP+AGTLTP RKGDV IPYLSLRELNMEQ Q RIS S+  PIYLVT
Subjt:  FHDDVHQARARAFRA-----SISGPVYITESR-SVSTTPYRSTT-RPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

AT5G49170.1 unknown protein

5.8e-39

55.83

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Query:  MSNK--SPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDD----SKNNTKKKKKRW-W-KNAFLFFKW-KWI-----
        MSNK  SP+FP  +  QHFSDYGFDPQI YFQVLEEA+KH+   S SID+  FKLQKPISKDD    + +N  K KKRW W KNA  FFKW KW      
Subjt:  MSNK--SPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDD----SKNNTKKKKKRW-W-KNAFLFFKW-KWI-----

Query:  ------HQQNDAAFHD--DVHQARARAFRA-SISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPM--
                  D  F D  DVH ARAR FRA SISGPVY+TES S S+TPYR  T  S+                + YLSLRELNME+QQ RI+TS+ M  
Subjt:  ------HQQNDAAFHD--DVHQARARAFRA-SISGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPM--

Query:  PIYLVT
        PIYLVT
Subjt:  PIYLVT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCCAACAAATCCCCTGTTTTTCCTTTCCCGGAAGAACCTCAACATTTCAGCGACTATGGCTTCGACCCTCAAATCGACTATTTTCAGGTTTTGGAAGAAGCAAGAAA
ACACAGACGTGAATCTTCAAGATCCATAGACTCCATTCATTTCAAGCTCCAGAAACCAATTTCCAAAGACGATTCAAAGAACAACACAAAGAAGAAGAAAAAACGTTGGT
GGAAAAACGCTTTCCTTTTCTTCAAATGGAAATGGATCCACCAACAAAACGACGCCGCTTTCCACGACGACGTTCATCAAGCCAGAGCTCGTGCTTTCCGTGCCTCTATT
TCCGGTCCAGTTTACATTACAGAAAGTCGGAGCGTTTCCACCACACCTTACCGGTCCACTACTCGACCGTCCTCCGGTCCACTCGCTGGAACTCTAACGCCGACTAGAAA
AGGCGATGTTGAAATTCCTTATCTCAGCCTCCGAGAACTCAACATGGAGCAACAACAATACAGAATTTCCACGTCAGCACCCATGCCTATTTATTTAGTCACTTAA

mRNA sequence

Show/hide mRNA sequence

TCTCTCTTAAAAATAAATAAATAAATAATAGAAGTATAAAGCAACCTCTCTCTCACCTCTCTCCATCTAACTTTTGCTTTTTCAAATTCCCACTTTAAAAAAAAAAAAAA
AACCTCTCCCCTGATTTGATCTCTTCACCTTCCAAAAGAAAAAGAAAAAATGTCCAACAAATCCCCTGTTTTTCCTTTCCCGGAAGAACCTCAACATTTCAGCGACTATG
GCTTCGACCCTCAAATCGACTATTTTCAGGTTTTGGAAGAAGCAAGAAAACACAGACGTGAATCTTCAAGATCCATAGACTCCATTCATTTCAAGCTCCAGAAACCAATT
TCCAAAGACGATTCAAAGAACAACACAAAGAAGAAGAAAAAACGTTGGTGGAAAAACGCTTTCCTTTTCTTCAAATGGAAATGGATCCACCAACAAAACGACGCCGCTTT
CCACGACGACGTTCATCAAGCCAGAGCTCGTGCTTTCCGTGCCTCTATTTCCGGTCCAGTTTACATTACAGAAAGTCGGAGCGTTTCCACCACACCTTACCGGTCCACTA
CTCGACCGTCCTCCGGTCCACTCGCTGGAACTCTAACGCCGACTAGAAAAGGCGATGTTGAAATTCCTTATCTCAGCCTCCGAGAACTCAACATGGAGCAACAACAATAC
AGAATTTCCACGTCAGCACCCATGCCTATTTATTTAGTCACTTAAAATTAATTTAAATAAAAAAAATTGTGGATTTCGATTATTAGATTTATGAAGAAGAAAGTACTCTG
TAAAGTGGGTGGTTTTTTTT

Protein sequence

Show/hide protein sequence

MSNKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSIHFKLQKPISKDDSKNNTKKKKKRWWKNAFLFFKWKWIHQQNDAAFHDDVHQARARAFRASI
SGPVYITESRSVSTTPYRSTTRPSSGPLAGTLTPTRKGDVEIPYLSLRELNMEQQQYRISTSAPMPIYLVT

Lsi09G014480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome