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Lsi09G014510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:22488457..22488738
RNA-Seq ExpressionLsi09G014510
SyntenyLsi09G014510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1971.95Show/hide
Query:  APRADLAKIGREGFELIDEYFGRAPAARKVA--TKARPVLPQPPRKAEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRA
        A R DLAKIGREGF+LIDEYFGRAPA R+ A    ARP LPQ P KAEQPPRK+ EK   AV   +QVAK+RGGIVITTWRA
Subjt:  APRADLAKIGREGFELIDEYFGRAPAARKVA--TKARPVLPQPPRKAEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRA

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1972.5Show/hide
Query:  APRADLAKIGREGFELIDEYFGRAPAARKVATKARPVLPQPPRKAEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRA
        APRADLAKIGREGFELIDEYFGR PA R+ A  ARP LPQ P KAEQPPRK  EK    V   +QVA++RGG+VITTWRA
Subjt:  APRADLAKIGREGFELIDEYFGRAPAARKVATKARPVLPQPPRKAEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRA

KGN47421.1 hypothetical protein Csa_021737 [Cucumis sativus]1.3e-1562.77Show/hide
Query:  REREIRAPRADLAKIGREGFELIDEYFGRA--PAARKV--ATKARPVLPQPPRK-AEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRAYAK
        REREI    A+LA+IG EGF+LID++FGRA     R+V  AT+ RP   QPPRK AEQPP K  EK   AV TSD +AK+RGGIVITTWR+YAK
Subjt:  REREIRAPRADLAKIGREGFELIDEYFGRA--PAARKV--ATKARPVLPQPPRK-AEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRAYAK

KGN47422.1 hypothetical protein Csa_021740 [Cucumis sativus]1.4e-2778.12Show/hide
Query:  MGFLREREIRAPRADLAKIGREGFELIDEYFGRAPA--ARKVATK-ARPVLPQPPRKAEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRAYAK
        MGFLREREIR  R DLAKIGREGF++IDEYFGRA +  AR+VA K ARP LPQPPRKAEQPPR R EKP AAV TSDQVAK  GG VITTWR YAK
Subjt:  MGFLREREIRAPRADLAKIGREGFELIDEYFGRAPA--ARKVATK-ARPVLPQPPRKAEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRAYAK

XP_023548315.1 multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]2.9e-1277.19Show/hide
Query:  APRADLAKIGREGFELIDEYFGRAPAARKVATKA--RPVLPQPPRKAEQPPRKRTEK
        APRADLAKIGREGFELIDEYFGR PA R+ A  A  RP LPQ P KAEQPPRK  EK
Subjt:  APRADLAKIGREGFELIDEYFGRAPAARKVATKA--RPVLPQPPRKAEQPPRKRTEK

TrEMBL top hitse value%identityAlignment
A0A0A0KG95 Uncharacterized protein7.0e-2878.12Show/hide
Query:  MGFLREREIRAPRADLAKIGREGFELIDEYFGRAPA--ARKVATK-ARPVLPQPPRKAEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRAYAK
        MGFLREREIR  R DLAKIGREGF++IDEYFGRA +  AR+VA K ARP LPQPPRKAEQPPR R EKP AAV TSDQVAK  GG VITTWR YAK
Subjt:  MGFLREREIRAPRADLAKIGREGFELIDEYFGRAPA--ARKVATK-ARPVLPQPPRKAEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRAYAK

A0A0A0KI19 Uncharacterized protein6.1e-1662.77Show/hide
Query:  REREIRAPRADLAKIGREGFELIDEYFGRA--PAARKV--ATKARPVLPQPPRK-AEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRAYAK
        REREI    A+LA+IG EGF+LID++FGRA     R+V  AT+ RP   QPPRK AEQPP K  EK   AV TSD +AK+RGGIVITTWR+YAK
Subjt:  REREIRAPRADLAKIGREGFELIDEYFGRA--PAARKV--ATKARPVLPQPPRK-AEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRAYAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTCTTAGAGAAAGAGAAATTAGGGCTCCTCGTGCTGACCTGGCGAAAATTGGGAGAGAAGGATTTGAACTAATTGACGAATACTTTGGCCGAGCGCCGGCGGC
GAGAAAGGTGGCGACGAAGGCAAGGCCAGTTCTACCGCAGCCACCACGTAAGGCGGAGCAACCTCCGAGGAAGAGGACAGAAAAACCGGCAGCTGCGGTGACGACCTCCG
ATCAGGTGGCCAAAAGCCGCGGCGGAATCGTGATAACAACTTGGCGTGCGTATGCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTCTTAGAGAAAGAGAAATTAGGGCTCCTCGTGCTGACCTGGCGAAAATTGGGAGAGAAGGATTTGAACTAATTGACGAATACTTTGGCCGAGCGCCGGCGGC
GAGAAAGGTGGCGACGAAGGCAAGGCCAGTTCTACCGCAGCCACCACGTAAGGCGGAGCAACCTCCGAGGAAGAGGACAGAAAAACCGGCAGCTGCGGTGACGACCTCCG
ATCAGGTGGCCAAAAGCCGCGGCGGAATCGTGATAACAACTTGGCGTGCGTATGCAAAATGA
Protein sequenceShow/hide protein sequence
MGFLREREIRAPRADLAKIGREGFELIDEYFGRAPAARKVATKARPVLPQPPRKAEQPPRKRTEKPAAAVTTSDQVAKSRGGIVITTWRAYAK