CuGenDBv2

Gene ID	Lsi09G014550
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	glycine-rich protein
Genome location	chr09:22520830..22521429
RNA-Seq Expression	Lsi09G014550
Synteny	Lsi09G014550
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008458406.1 PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo]

4.0e-91

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Query:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIP S  A +L+LSAALFPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFCGGDFDGPYGGD-GGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC
        GREDDGF GGDFDGPYGGD GGGGGGRGWNFDRFGGN WDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGKLSMRLISVC
Subjt:  GREDDGFCGGDFDGPYGGD-GGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

XP_011657286.1 uncharacterized protein LOC105435841 [Cucumis sativus]

2.5e-93

93.5

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Query:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPS  A AL+LSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFCGGDFDGPYGGDGGG-GGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC
        GREDDGF GGDFDGP GGDGGG GGGRGWNFDRFGGN WDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKL+MRLISVC
Subjt:  GREDDGFCGGDFDGPYGGDGGG-GGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

XP_022138602.1 uncharacterized protein LOC111009719 [Momordica charantia]

2.2e-89

89.95

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Query:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSM ANNG+GFAKFLNRLDFVSNYC+S +DSIT+QIPPS AAGALQLSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC
        G EDDGF G +FDG YGG GGGG GRGWNFDRFGGN WDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+AIGNSERGKLSMRLISVC
Subjt:  GREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

XP_023548774.1 uncharacterized protein LOC111807330 [Cucurbita pepo subsp. pepo]

1.1e-88

89.5

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Query:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDS
        MDTSLVAGTLSMVANNG+GFAKFLNRLD +SNY IS TDSITDQIPPS AAGALQLSAALFPVATIAPPPVKS+S RS+SRTFLRRKRRTKRRLY SDDS
Subjt:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDS

Query:  EGREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC
        EG ED+GF GGDFDGPYGGDGGGGGGRGWNFDRFGG+ WDESSSSS+S NPAYYFVYEV+CWIALSNCVHFAFKKVVRFAAEAIGNSER KL  RLISVC
Subjt:  EGREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

XP_038874866.1 uncharacterized protein LOC120067363 [Benincasa hispida]

5.9e-95

92.96

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Query:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSMVANNGIGFAKFLNRLDFVSNYCIS TDS+TDQI PS AAGALQLSAALFP+ATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS DSE
Subjt:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC
        GREDDGF GGDFDGPYGGDG  GGGRGWNFDRFGGN WDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA EA+GNSERGK+SMRLISVC
Subjt:  GREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KG90 Uncharacterized protein

1.2e-93

93.5

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Query:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPS  A AL+LSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFCGGDFDGPYGGDGGG-GGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC
        GREDDGF GGDFDGP GGDGGG GGGRGWNFDRFGGN WDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKL+MRLISVC
Subjt:  GREDDGFCGGDFDGPYGGDGGG-GGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

A0A1S3C7S8 uncharacterized protein LOC103497828

1.9e-91

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Query:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIP S  A +L+LSAALFPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFCGGDFDGPYGGD-GGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC
        GREDDGF GGDFDGPYGGD GGGGGGRGWNFDRFGGN WDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGKLSMRLISVC
Subjt:  GREDDGFCGGDFDGPYGGD-GGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

A0A6J1CBL0 uncharacterized protein LOC111009719

1.1e-89

89.95

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Query:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSM ANNG+GFAKFLNRLDFVSNYC+S +DSIT+QIPPS AAGALQLSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC
        G EDDGF G +FDG YGG GGGG GRGWNFDRFGGN WDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+AIGNSERGKLSMRLISVC
Subjt:  GREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

A0A6J1H560 uncharacterized protein LOC111460236

2.2e-87

88.5

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Query:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS-DDS
        MDTSLVAGTLSMVANNG+GFAKFLNRLD +SNY  S TDSITDQIPPS AAGALQLSAALFPVATIAPPPVKS+S RS+SR FLRRKRRTKRRLYS DDS
Subjt:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS-DDS

Query:  EGREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC
        EG ED+GF GGDFDGPYGGDGGGGGGRGWNFDRF G+ WDESSSSS+S NPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSER KL +RLISVC
Subjt:  EGREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

A0A6J1KZI4 uncharacterized protein LOC111499005

2.0e-88

89.5

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Query:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDS
        MDTSLVAGTLS+VANNG+GFAKFLNRLD +SNY IS TDSITDQIPPS AAGALQLS ALFPVATIAPPPVKS+S RS+SRTFLRRKRRTKRRLY SDDS
Subjt:  MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDS

Query:  EGREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC
        EG ED+GF  GDFDGPYGGDGGGGGGRGWNFDRFGGN WDESSSSS+S NPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSER KL MRLISVC
Subjt:  EGREDDGFCGGDFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06780.1 glycine-rich protein

8.9e-33

48.11

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Query:  MDTSLVAGTLSM-VANNGIGFAK-FLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDD
        M+ SL+A T+++  A  GI F K  L RLD  ++  IS  DS+ D    SP  G +Q SA +FPV  IAPPPV+S SY++  R  +R+KRRT+R  +  D
Subjt:  MDTSLVAGTLSM-VANNGIGFAK-FLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDD

Query:  SEGREDDG--FCGGDF---DGPYGGDGGG--GGGRGWNF----DRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSE
         +   D G     GDF   DGP+G  GGG  GGG+GWN+      FG + WD  SS SS S+PA  FVYEV+CWIALSNCVHFAFK++VR     + + E
Subjt:  SEGREDDG--FCGGDF---DGPYGGDGGG--GGGRGWNF----DRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSE

Query:  RGKLSMRLISVC
        R KL++ L  VC
Subjt:  RGKLSMRLISVC

Sequences

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CDS sequence

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ATGGATACTTCTCTGGTTGCTGGAACGCTTTCAATGGTCGCCAACAATGGCATCGGCTTCGCCAAATTCCTGAATCGCCTCGATTTCGTTTCCAATTACTGTATCTCTAC
CACCGATTCAATCACCGACCAGATCCCACCGTCTCCCGCCGCCGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCGG
TTTCGTACCGATCGGCCTCGCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAGGGCCGTGAGGACGATGGATTCTGCGGCGGC
GATTTTGACGGACCGTATGGTGGAGATGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTTGATAGATTTGGGGGAAATGGTTGGGACGAATCATCGTCTTCTTCTTCCTC
TTCTAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATTGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTG
GGAACTCCGAAAGGGGGAAATTGTCCATGAGATTAATCTCCGTTTGTTGA

mRNA sequence

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Protein sequence

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MDTSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISTTDSITDQIPPSPAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFCGG
DFDGPYGGDGGGGGGRGWNFDRFGGNGWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRLISVC

Lsi09G014550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome