CuGenDBv2

Gene ID	Lsi09G014730
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Glycine-rich protein family
Genome location	chr09:22729597..22734993
RNA-Seq Expression	Lsi09G014730
Synteny	Lsi09G014730
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6594002.1 hypothetical protein SDJN03_13478, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-32

89.33

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IYSACEES RLK SGN+EVP EKTEEYCNGPCLGETHLVLDCI+GIFSNFLFYN+ATLQDV+DTI AGCGYGPQR
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

KAG7026342.1 hypothetical protein SDJN02_12843, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-32

89.33

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IYSACEES RLK SGN+EVP EKTEEYCNGPCLGETHLVLDCI+GIFSNFLFYN+ATLQDV+DTI AGCGYGPQR
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

XP_008458378.1 PREDICTED: uncharacterized protein LOC103497804 [Cucumis melo]

7.9e-33

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IYSACEES RLKESGNLEVP EKTEEYCNGPCL ET LVLDCINGIFSNFLFYNRATLQDV+DTI AGCGYGPQR
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

XP_022138327.1 uncharacterized protein LOC111009540 isoform X1 [Momordica charantia]

7.9e-33

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IY ACEESCRLKESGN+EVP EKT+E+CNGPCLGETHLVLDCIN IF+NFLFYNRATLQDV+DTIQAGC YGPQR
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

XP_038906636.1 uncharacterized protein LOC120092583 [Benincasa hispida]

2.0e-36

97.33

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IYSACEESCRLKESGNLEVPQEKTEEYCNGPCL ETHLVLDCINGIFSNFLFYNRATLQDV+DTIQAGCGYGPQR
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCE5 Uncharacterized protein

1.9e-32

89.33

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IYSACEES RLKESGNLEVP EKTEEYCNGPCL ET LVLDCI+GIFSNFLFYNRATLQDV+DT+ AGCGYGPQR
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

A0A1S3C8B8 uncharacterized protein LOC103497804

3.8e-33

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IYSACEES RLKESGNLEVP EKTEEYCNGPCL ET LVLDCINGIFSNFLFYNRATLQDV+DTI AGCGYGPQR
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

A0A6J1CAS9 uncharacterized protein LOC111009540 isoform X1

3.8e-33

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IY ACEESCRLKESGN+EVP EKT+E+CNGPCLGETHLVLDCIN IF+NFLFYNRATLQDV+DTIQAGC YGPQR
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

A0A6J1EX17 uncharacterized protein LOC111436937

3.2e-32

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IYSACEES RLK SGN+EVP EKTEEYC+GPCLGETHLVLDCI+GIFSNFLFYN+ATLQDV+DTI AGCGYGPQR
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

A0A6J1KET4 uncharacterized protein LOC111494359

1.9e-32

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IYSACEES RLK SGN+EVP E+TEEYCNGPCLGETHLVLDCI+GIFSNFLFYN+ATLQDV+DTI AGCGYGPQR
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G56320.1 BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)

9.0e-19

50.72

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGC
        +Y  C E+ RL + G  +VP E+T+ +CNGPC  ET LVL CIN + S+F+FYNRAT +DV++ ++ GC
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGC

AT5G49350.1 Glycine-rich protein family

2.5e-21

50.67

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IY  C+ES RL  +G+L +P  +TEE+C GPC  ETHL L+CI  I  ++ F+NRAT+ D+++T+++GC YGP+R
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

AT5G49350.2 Glycine-rich protein family

2.5e-21

50.67

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Query:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR
        IY  C+ES RL  +G+L +P  +TEE+C GPC  ETHL L+CI  I  ++ F+NRAT+ D+++T+++GC YGP+R
Subjt:  IYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQR

Sequences

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CDS sequence

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ATGGCTATTTACAGCGCGTGTGAAGAATCGTGTAGATTAAAGGAGAGTGGGAATCTGGAGGTCCCACAAGAGAAAACGGAGGAATATTGCAACGGGCCGTGTTTGGGTGA
AACGCATTTGGTGTTGGATTGCATTAATGGCATTTTTAGTAACTTCTTGTTTTACAATAGGGCCACGTTGCAAGATGTTAAGGATACCATCCAGGCTGGATGTGGCTATG
GCCCACAAAGAGTTTATGAGAAACAAAAGCACTAA

mRNA sequence

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Protein sequence

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MAIYSACEESCRLKESGNLEVPQEKTEEYCNGPCLGETHLVLDCINGIFSNFLFYNRATLQDVKDTIQAGCGYGPQRVYEKQKH

Lsi09G014730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome