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Lsi09G014810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G014810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L29
Genome locationchr09:22863603..22864278
RNA-Seq ExpressionLsi09G014810
SyntenyLsi09G014810
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013674.1 60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-2195.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE  SEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

XP_022930218.1 60S ribosomal protein L29-1 [Cucurbita moschata]7.8e-2296.67Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE

XP_023000055.1 60S ribosomal protein L29-1 [Cucurbita maxima]3.5e-2296.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

XP_038875270.1 60S ribosomal protein L29-1 [Benincasa hispida]3.2e-23100Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

XP_038875325.1 60S ribosomal protein L29-1-like [Benincasa hispida]1.6e-2298.36Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

TrEMBL top hitse value%identityAlignment
A0A1S3C7P2 60S ribosomal protein L296.4e-2296.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQS KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENAS EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

A0A6J1EUF7 60S ribosomal protein L293.8e-2296.67Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE

A0A6J1H4N3 60S ribosomal protein L294.9e-2295.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE  SEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

A0A6J1KHA4 60S ribosomal protein L291.7e-2296.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

A0A6J1L4P4 60S ribosomal protein L294.9e-2295.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE  SEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L292.8e-1476.92Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q58DW3 60S ribosomal protein L292.8e-1476.92Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q84WM0 60S ribosomal protein L29-21.8e-2186.89Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

Q8HXB8 60S ribosomal protein L292.8e-1476.92Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q9M7X7 60S ribosomal protein L29-11.1e-2186.89Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family1.3e-2286.89Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

AT3G06680.2 Ribosomal L29e protein family1.3e-2286.89Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

AT3G06700.1 Ribosomal L29e protein family7.5e-2386.89Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

AT3G06700.2 Ribosomal L29e protein family7.5e-2386.89Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

AT3G06700.3 Ribosomal L29e protein family7.5e-2386.89Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAATCACGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGATCC
GAAGTTCCTTAGGAATCAAAGGTACGCGAAGAAACACAATAACAAGAGTGGAGAAAATGCTTCTGAGGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATTAGAAACCCTAGCTTGTTCATATCCCTCTCTTCGTCTTCCCATCGATTTCTTCTACAACCAGAAGTCGGATTTCACTCTCTCGTTTGTGCTTTTCCGTTCAGAGATGG
CGAAGTCGAAGAATCACACAGCTCACAATCAATCACGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCGAAG
TTCCTTAGGAATCAAAGGTACGCGAAGAAACACAATAACAAGAGTGGAGAAAATGCTTCTGAGGAAGAGTAAAGTAGAATGCGCCAAGTTTAGGGTTTTTATAATTTAAG
TTTTTCTTATATTGAATCTTTTGTTATCGCTTTTCTTTTTGTTCAGTAGACTTGCTATTTTGACTCAATGTGGAAACTGATGCTTCTGAGGCCTGTTTTTCGACAATACA
TTATCTGATCTGCATTTTTAAGGCTTGAACTATTGGTTACATCTACATATAGAATCAATTTGTGCCATTGATATTCTTTTCACTCAGCAAAGACATTATCTTCGTTTTAA
TGGTTGGTTTGATTAC
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE