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Lsi09G015010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G015010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:23036778..23038961
RNA-Seq ExpressionLsi09G015010
SyntenyLsi09G015010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575119.1 hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2262.73Show/hide
Query:  MMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPED------ADDANNIGANNNDDDDDENLGYKNYGKGSDTETHR
        MMK+V +L    LLL++ DAAM+GV EKK +RKL +    + TPETE FS   E  PED      AD   NI  NNN DDDDENLGYKNYGKGSDTETHR
Subjt:  MMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPED------ADDANNIGANNNDDDDDENLGYKNYGKGSDTETHR

Query:  YFSSDKPYRP
        YFSSDKPY P
Subjt:  YFSSDKPYRP

KAG6594018.1 hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1962.62Show/hide
Query:  MIMMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDAN-NIGANNNDDDDDENLGYKNYGKGSDTETHRYFS
        M MMKR  LLFA  LLL+  DA M+ V +KK +RKL Q FS  Q P+T  F        EDAD A  ++G NNN+D+DDENLGYKNYGKGSDTETHRYFS
Subjt:  MIMMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDAN-NIGANNNDDDDDENLGYKNYGKGSDTETHRYFS

Query:  SDKPYRP
        S+KPYRP
Subjt:  SDKPYRP

KAG7013689.1 hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-2262.73Show/hide
Query:  MMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPED------ADDANNIGANNNDDDDDENLGYKNYGKGSDTETHR
        MMK+V +L    LLL++ DAAM+GV EKK +RKL +    + TPETE FS   E  PED      AD   NI  NNN DDDDENLGYKNYGKGSDTETHR
Subjt:  MMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPED------ADDANNIGANNNDDDDDENLGYKNYGKGSDTETHR

Query:  YFSSDKPYRP
        YFSSDKPY P
Subjt:  YFSSDKPYRP

TYK02960.1 uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa]6.2e-2569.72Show/hide
Query:  MMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDA-NNIGANN--NDD--DDDENLGYKNYGKGSDTETHRY
        MMKRV LLFA LLLLL+ADAAM+ V EKKG+RKL QG  DR+ P+ E F+ ANEP+ +  D A +++ ANN  NDD  DDD NLGYKNYGKGSDTETHRY
Subjt:  MMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDA-NNIGANN--NDD--DDDENLGYKNYGKGSDTETHRY

Query:  FSSDKPYRP
        FSSDKPYRP
Subjt:  FSSDKPYRP

XP_004150985.1 uncharacterized protein LOC101207042 [Cucumis sativus]1.4e-2468.47Show/hide
Query:  MIMMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDA-NNIGANNN----DDDDDENLGYKNYGKGSDTETH
        MIMMKRV LLFAALLLLL+ADA    + EKKG+RKL QGFS+R+TP+   F+ ANE D E+ D A +++ ANNN    ++DDD NLGYKNYGKGSDTETH
Subjt:  MIMMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDA-NNIGANNN----DDDDDENLGYKNYGKGSDTETH

Query:  RYFSSDKPYRP
        RYFSSDKPYRP
Subjt:  RYFSSDKPYRP

TrEMBL top hitse value%identityAlignment
A0A0A0KGD6 Uncharacterized protein6.7e-2568.47Show/hide
Query:  MIMMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDA-NNIGANNN----DDDDDENLGYKNYGKGSDTETH
        MIMMKRV LLFAALLLLL+ADA    + EKKG+RKL QGFS+R+TP+   F+ ANE D E+ D A +++ ANNN    ++DDD NLGYKNYGKGSDTETH
Subjt:  MIMMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDA-NNIGANNN----DDDDDENLGYKNYGKGSDTETH

Query:  RYFSSDKPYRP
        RYFSSDKPYRP
Subjt:  RYFSSDKPYRP

A0A5D3BV16 Uncharacterized protein3.0e-2569.72Show/hide
Query:  MMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDA-NNIGANN--NDD--DDDENLGYKNYGKGSDTETHRY
        MMKRV LLFA LLLLL+ADAAM+ V EKKG+RKL QG  DR+ P+ E F+ ANEP+ +  D A +++ ANN  NDD  DDD NLGYKNYGKGSDTETHRY
Subjt:  MMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDA-NNIGANN--NDD--DDDENLGYKNYGKGSDTETHRY

Query:  FSSDKPYRP
        FSSDKPYRP
Subjt:  FSSDKPYRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGTTTTATAGTGATGATTATGATGAAGAGGGTGTTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCGTGGCAGACGCCGCGATGAACGGCGTCGCCGAGAAGAA
GGGCTCACGTAAGCTAGTTCAAGGCTTCAGTGACCGACAAACCCCAGAAACGGAAGCGTTCAGCACAGCAAATGAGCCTGACCCTGAAGATGCTGATGACGCTAATAACA
TTGGAGCTAACAACAACGATGACGACGACGACGAAAATCTTGGTTATAAAAATTACGGAAAGGGCTCCGACACCGAAACTCACCGTTACTTCTCGAGTGATAAGCCATAT
AGACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGTTTTATAGTGATGATTATGATGAAGAGGGTGTTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCGTGGCAGACGCCGCGATGAACGGCGTCGCCGAGAAGAA
GGGCTCACGTAAGCTAGTTCAAGGCTTCAGTGACCGACAAACCCCAGAAACGGAAGCGTTCAGCACAGCAAATGAGCCTGACCCTGAAGATGCTGATGACGCTAATAACA
TTGGAGCTAACAACAACGATGACGACGACGACGAAAATCTTGGTTATAAAAATTACGGAAAGGGCTCCGACACCGAAACTCACCGTTACTTCTCGAGTGATAAGCCATAT
AGACCCTAGAAAACTCTTCAGATCATCGCCACCGTTGTCGTTGCCGTTGTCGTCTTATCAGGTAGTCAATTGTAAAGAAGAAGAAAAAATGAAGTGTTTTTCTCTTGTAA
TAAAGTGAAATGTGCATGGAAATGTCTGCTGAAGAGCCTAAAGTTAAAGAGAATAGTTGGCTGAAGCATGCAACGCTTTGGCATTTCACAGAGTTTGATGTTTGGTTGTG
TGTTGTGAAAAAAATAATATAATGAATAATGTGGATGAAATGATCAAAATATATGTGTATCATATAATTTTATGTTATGGCGTGTATTATGATTTGGCTTGTATTAATTA
TTCTATGAAAGTTGGTGATGATCTTGATCTTGTTATTACT
Protein sequenceShow/hide protein sequence
MQGFIVMIMMKRVFLLFAALLLLLVADAAMNGVAEKKGSRKLVQGFSDRQTPETEAFSTANEPDPEDADDANNIGANNNDDDDDENLGYKNYGKGSDTETHRYFSSDKPY
RP