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Lsi09G015300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G015300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr09:23414202..23416817
RNA-Seq ExpressionLsi09G015300
SyntenyLsi09G015300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458283.1 PREDICTED: uncharacterized protein LOC103497748 isoform X1 [Cucumis melo]7.9e-0492.59Show/hide
Query:  MASSVQRSPRLDQIHGEIHDSFRAIPY
        MASSVQRSP+LDQIHGEI DSFRAIPY
Subjt:  MASSVQRSPRLDQIHGEIHDSFRAIPY
XP_008458284.1 PREDICTED: uncharacterized protein LOC103497748 isoform X2 [Cucumis melo]7.9e-0492.59Show/hide
Query:  MASSVQRSPRLDQIHGEIHDSFRAIPY
        MASSVQRSP+LDQIHGEI DSFRAIPY
Subjt:  MASSVQRSPRLDQIHGEIHDSFRAIPY
XP_038906599.1 uncharacterized protein LOC120092551 isoform X1 [Benincasa hispida]4.6e-0492.59Show/hide
Query:  MASSVQRSPRLDQIHGEIHDSFRAIPY
        MASSVQRSPRLDQIHGEI DSFRA+PY
Subjt:  MASSVQRSPRLDQIHGEIHDSFRAIPY
TrEMBL top hitse value%identityAlignment
A0A0A0KCW9 SWIM-type domain-containing protein5.0e-0492.59Show/hide
Query:  MASSVQRSPRLDQIHGEIHDSFRAIPY
        MASSVQRSPRLDQIHGEI DSFR IPY
Subjt:  MASSVQRSPRLDQIHGEIHDSFRAIPY
A0A1S3C712 uncharacterized protein LOC103497748 isoform X23.8e-0492.59Show/hide
Query:  MASSVQRSPRLDQIHGEIHDSFRAIPY
        MASSVQRSP+LDQIHGEI DSFRAIPY
Subjt:  MASSVQRSPRLDQIHGEIHDSFRAIPY
A0A1S3C8R6 uncharacterized protein LOC103497748 isoform X13.8e-0492.59Show/hide
Query:  MASSVQRSPRLDQIHGEIHDSFRAIPY
        MASSVQRSP+LDQIHGEI DSFRAIPY
Subjt:  MASSVQRSPRLDQIHGEIHDSFRAIPY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGCAGTGTGCAGAGGAGCCCTCGGTTGGATCAGATCCATGGCGAAATTCACGACAGTTTTCGTGCCATTCCGTATTTCGAACGACAAAGACCAAAAGGATCCCC
TAACTCATCCAAGAAAGCAACTCTCCCTCTAGATCTAGAAGGACCATACACACCCGTCACCCAACAGCTTTCGCCCCGTGGTATCCTAATCAAAACTGAAAGGGAGAAGA
CTCCTCCAGCCACCTCCATAGCGACAGCTTACGACTATTCCACATCATCAAAATGCCTTTGGACTTCCTTACAGAATCAAGACTCTCCCGTTCCACCCTTCTTGACCTTC
AGATGCTAC
mRNA sequenceShow/hide mRNA sequence
TTTACTCTCCCGGCGGAATGGCTAGCAGTGTGCAGAGGAGCCCTCGGTTGGATCAGATCCATGGCGAAATTCACGACAGTTTTCGTGCCATTCCGTATTTCGAACGACAA
AGACCAAAAGGATCCCCTAACTCATCCAAGAAAGCAACTCTCCCTCTAGATCTAGAAGGACCATACACACCCGTCACCCAACAGCTTTCGCCCCGTGGTATCCTAATCAA
AACTGAAAGGGAGAAGACTCCTCCAGCCACCTCCATAGCGACAGCTTACGACTATTCCACATCATCAAAATGCCTTTGGACTTCCTTACAGAATCAAGACTCTCCCGTTC
CACCCTTCTTGACCTTCAGATGCTAC
Protein sequenceShow/hide protein sequence
MASSVQRSPRLDQIHGEIHDSFRAIPYFERQRPKGSPNSSKKATLPLDLEGPYTPVTQQLSPRGILIKTEREKTPPATSIATAYDYSTSSKCLWTSLQNQDSPVPPFLTF
RCY