; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G015310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G015310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptiontRNA pseudouridine synthase
Genome locationchr09:23420059..23422798
RNA-Seq ExpressionLsi09G015310
SyntenyLsi09G015310
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0070300 - phosphatidic acid binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138518.2 uncharacterized protein LOC101205797 [Cucumis sativus]3.7e-14181.37Show/hide
Query:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSPLSPAS-----NGGCSS--LMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHL
        MRCWAVGSPVLPPISLPLSP IP PNGASSSSSRGFP+    AS     +  C    L++  D         QRSPPTIQCLIEEALIGATKLERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSPLSPAS-----NGGCSS--LMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAA
        VGASRTDKGVHAWGQVAHF+TPFNYDSLE+VHAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIY+G I+DPFQRCYTYHCVYKLNYAAM+EAA
Subjt:  VGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAA

Query:  NYFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCL
        NYFVGKHDFSAFTNAAHNDRV               G LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDR+ELAKYASGVPPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGSSFG
        VSINYKEDHLKLPSDCPG+SFG
Subjt:  VSINYKEDHLKLPSDCPGSSFG

XP_008458279.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo]2.8e-14180.12Show/hide
Query:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV
        MRCWAVGSPVLPPISLP SP IP PNGASSSSSRGFP+         P        L++  D         QRSPPTIQCLIEEALIGATKLERKDLHLV
Subjt:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV

Query:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN
        GASRTDKGVHAWGQVAHF+TPFNYDSLE+VHAALNGLLPVDIRVRE+SPAAPDFHARFSTLSKVYHYKIYNG I+DPFQRCYTYHCVYKLNYAAM+EAAN
Subjt:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN

Query:  YFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV
        YFVGKHDFSAFTNAAHN+RV               G LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDRKELAKYASGVPPQGLCLV
Subjt:  YFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV

Query:  SINYKEDHLKLPSDCPGSSFGCSNNLG
        SINYKEDHLKLPSDCPG+S G S ++G
Subjt:  SINYKEDHLKLPSDCPGSSFGCSNNLG

XP_038875516.1 tRNA pseudouridine synthase A 1 isoform X1 [Benincasa hispida]4.6e-14483.18Show/hide
Query:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV
        MRCWAVGSPVLPPISLPLSP+IPFPNGASSSSSRG P+       ++P        L++  D         QRSPPTIQCLIEEALIGATKLERKDLHLV
Subjt:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV

Query:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN
        GASRTDKGVHAWGQVAHFITPFNYDSLE+VHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAM+EAAN
Subjt:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN

Query:  YFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV
        YFVGKHDFSAFTNAAHNDRV               GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILAS+DR+ELAKYASGVPPQGLCLV
Subjt:  YFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV

Query:  SINYKEDHLKLPSDCPGSSFG
        SINYKEDHLKLPSDCPG+S G
Subjt:  SINYKEDHLKLPSDCPGSSFG

XP_038875517.1 tRNA pseudouridine synthase A 1 isoform X2 [Benincasa hispida]3.2e-14585.85Show/hide
Query:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV
        MRCWAVGSPVLPPISLPLSP+IPFPNGASSSSSRG P+       ++P        L++  D         QRSPPTIQCLIEEALIGATKLERKDLHLV
Subjt:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV

Query:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN
        GASRTDKGVHAWGQVAHFITPFNYDSLE+VHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAM+EAAN
Subjt:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN

Query:  YFVGKHDFSAFTNAAHNDRV-----GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLK
        YFVGKHDFSAFTNAAHNDRV     GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILAS+DR+ELAKYASGVPPQGLCLVSINYKEDHLK
Subjt:  YFVGKHDFSAFTNAAHNDRV-----GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLK

Query:  LPSDCPGSSFG
        LPSDCPG+S G
Subjt:  LPSDCPGSSFG

XP_038875518.1 tRNA pseudouridine synthase A 1 isoform X3 [Benincasa hispida]4.5e-14787.25Show/hide
Query:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV
        MRCWAVGSPVLPPISLPLSP+IPFPNGASSSSSRG P+       ++P        L++  D         QRSPPTIQCLIEEALIGATKLERKDLHLV
Subjt:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV

Query:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN
        GASRTDKGVHAWGQVAHFITPFNYDSLE+VHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAM+EAAN
Subjt:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN

Query:  YFVGKHDFSAFTNAAHNDRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPSDC
        YFVGKHDFSAFTNAAHNDRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILAS+DR+ELAKYASGVPPQGLCLVSINYKEDHLKLPSDC
Subjt:  YFVGKHDFSAFTNAAHNDRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPSDC

Query:  PGSSFG
        PG+S G
Subjt:  PGSSFG

TrEMBL top hitse value%identityAlignment
A0A0A0KB67 tRNA pseudouridine synthase2.0e-14581.46Show/hide
Query:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSPLSPAS-----NGGCSS--LMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHL
        MRCWAVGSPVLPPISLPLSP IP PNGASSSSSRGFP+    AS     +  C    L++  D         QRSPPTIQCLIEEALIGATKLERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSPLSPAS-----NGGCSS--LMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAA
        VGASRTDKGVHAWGQVAHF+TPFNYDSLE+VHAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIY+G I+DPFQRCYTYHCVYKLNYAAM+EAA
Subjt:  VGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAA

Query:  NYFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCL
        NYFVGKHDFSAFTNAAHNDRV               G LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDR+ELAKYASGVPPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGSSFGCSNNLGG
        VSINYKEDHLKLPSDCPG+SFGC NNLGG
Subjt:  VSINYKEDHLKLPSDCPGSSFGCSNNLGG

A0A1S3C7H4 tRNA pseudouridine synthase8.6e-13687.68Show/hide
Query:  SPLSPASNGGCSSLMMVPDTQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAA
        SPLSPASNGGCSSLM V D QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHF+TPFNYDSLE+VHAALNGLLPVDIRVRE+SPAA
Subjt:  SPLSPASNGGCSSLMMVPDTQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAA

Query:  PDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYR
        PDFHARFSTLSKVYHYKIYNG I+DPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTNAAHN+RV               G LVQLEVEGSGFLYR
Subjt:  PDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYR

Query:  QVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPSDCPGSSFGCSNNLG
        QVRNMVGLLVQIGKEA+PP+VVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPSDCPG+S G S ++G
Subjt:  QVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPSDCPGSSFGCSNNLG

A0A1S3C7L6 tRNA pseudouridine synthase1.4e-14180.12Show/hide
Query:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV
        MRCWAVGSPVLPPISLP SP IP PNGASSSSSRGFP+         P        L++  D         QRSPPTIQCLIEEALIGATKLERKDLHLV
Subjt:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV

Query:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN
        GASRTDKGVHAWGQVAHF+TPFNYDSLE+VHAALNGLLPVDIRVRE+SPAAPDFHARFSTLSKVYHYKIYNG I+DPFQRCYTYHCVYKLNYAAM+EAAN
Subjt:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN

Query:  YFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV
        YFVGKHDFSAFTNAAHN+RV               G LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDRKELAKYASGVPPQGLCLV
Subjt:  YFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV

Query:  SINYKEDHLKLPSDCPGSSFGCSNNLG
        SINYKEDHLKLPSDCPG+S G S ++G
Subjt:  SINYKEDHLKLPSDCPGSSFGCSNNLG

A0A5D3BY40 Protein TRIGALACTOSYLDIACYLGLYCEROL 41.2e-14081Show/hide
Query:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV
        MRCWAVGSPVLPPISLP SP IP PNGASSSSSRGFP+         P        L++  D         QRSPPTIQCLIEEALIGATKLERKDLHLV
Subjt:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMVPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLV

Query:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN
        GASRTDKGVHAWGQVAHF+TPFNYDSLE+VHAALNGLLPVDIRVRE+SPAAPDFHARFSTLSKVYHYKIYNG I+DPFQRCYTYHCVYKLNYAAM+EAAN
Subjt:  GASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAAN

Query:  YFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV
        YFVGKHDFSAFTNAAHN+RV               G LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDRKELAKYASGVPPQGLCLV
Subjt:  YFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV

Query:  SINYKEDHLKLPSDCPGSSFG
        SINYKEDHLKLPSDCPG+S G
Subjt:  SINYKEDHLKLPSDCPGSSFG

A0A6J1L0L1 tRNA pseudouridine synthase1.0e-12872.97Show/hide
Query:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSPLSPASNGGCSSLMMVPD---------------------TQRSPPTIQCLIEEALIGATKLE
        M CWAVGS VLP +  PLSPSIP   G  SS+ RGFP       N   SS +  PD                      QRSPPTIQCLIEEAL GAT+LE
Subjt:  MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSPLSPASNGGCSSLMMVPD---------------------TQRSPPTIQCLIEEALIGATKLE

Query:  RKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYA
        RKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSL+ +HAALNGLLP DIRVREISPA PDFHARFSTLSKVYHYKIYN AILDPFQRCYTYHCVYKLNYA
Subjt:  RKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYA

Query:  AMREAANYFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVP
        AM+EAANYFVGKHDFSAF N AHNDRV               G L+QLEVEGSGFLYRQVRNMV LL+QIGKEAIPPDVVPKILASRDRK LAKY + +P
Subjt:  AMREAANYFVGKHDFSAFTNAAHNDRV---------------GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVP

Query:  PQGLCLVSINYKEDHLKLPSDCPGSSFGCSNNL
        PQGLCLV INYKEDHLKLPSDCPG+SFG S+++
Subjt:  PQGLCLVSINYKEDHLKLPSDCPGSSFGCSNNL

SwissProt top hitse value%identityAlignment
A3DJK8 tRNA pseudouridine synthase A3.9e-3739.83Show/hide
Query:  QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN
        Q++  T+Q  IE A+ G T    + + L+GASRTD GVHA GQVA+FIT       +    ALN +LP DI ++E      DFHAR+    K Y Y IYN
Subjt:  QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN

Query:  GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHN-------------DRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVV
                R  TYH  +KL++ +M+ AA+YF+G HDFSAF ++  +             +R   +V+ E+ G GFLY  VR +VG L+++G   I  D +
Subjt:  GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHN-------------DRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVV

Query:  PKILASRDRKELAKYASGVPPQGLCLVSINY
        P+I+ SR RK   + A   P +GL LV + Y
Subjt:  PKILASRDRKELAKYASGVPPQGLCLVSINY

A5VLH4 tRNA pseudouridine synthase A1.4e-3436.91Show/hide
Query:  QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN
        Q +  T++  ++ A+    K     + ++G+ RTD GVHA  QVAHF  P++  S E++  ALN +LP+DI +++      DFHAR+S   K Y Y++  
Subjt:  QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN

Query:  GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAA---------------HNDRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPD
        G  ++PF+R YT H  Y LN   MR+AA+  VG HDF++F  +                  D V   V  +  G+GFLY QVR MV  L++IG    P D
Subjt:  GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAA---------------HNDRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPD

Query:  VVPKILASRDRKELAKYASGVPPQGLCLVSINY
         V ++L ++DR  LA+  +  P  GL LV+++Y
Subjt:  VVPKILASRDRKELAKYASGVPPQGLCLVSINY

B1I1B5 tRNA pseudouridine synthase A6.5e-4041.85Show/hide
Query:  PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAIL
        PTIQ  +E  L    +L    L + GASRTD GVHA GQV +F+T       E + AALNG+LP DI   +      DFHAR+S ++K Y Y +YN  + 
Subjt:  PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAIL

Query:  DPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNA-------------AHNDRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKIL
         PFQR Y+ H    L+  AMR AA + +G+HDFS F  A             A  +   PLV+L     GFLY  VR M G L+++G E + P+ +P I+
Subjt:  DPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNA-------------AHNDRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKIL

Query:  ASRDRKELAKYASGVPPQGLCLVSINY
        AS DR   A+    VPP GLCL  + Y
Subjt:  ASRDRKELAKYASGVPPQGLCLVSINY

B2G8U7 tRNA pseudouridine synthase A1.4e-3436.91Show/hide
Query:  QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN
        Q +  T++  ++ A+    K     + ++G+ RTD GVHA  QVAHF  P++  S E++  ALN +LP+DI +++      DFHAR+S   K Y Y++  
Subjt:  QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN

Query:  GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAA---------------HNDRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPD
        G  ++PF+R YT H  Y LN   MR+AA+  VG HDF++F  +                  D V   V  +  G+GFLY QVR MV  L++IG    P D
Subjt:  GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAA---------------HNDRVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPD

Query:  VVPKILASRDRKELAKYASGVPPQGLCLVSINY
         V ++L ++DR  LA+  +  P  GL LV+++Y
Subjt:  VVPKILASRDRKELAKYASGVPPQGLCLVSINY

Q6MEE7 tRNA pseudouridine synthase A 12.2e-4037.39Show/hide
Query:  QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN
        Q +  +IQ  I+EAL     L+++ + LVG+ RTD GVHA GQVAHF    +Y  L  +H +LNGLLP DIR++ + P +P FH+++S + K YHY ++ 
Subjt:  QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN

Query:  GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV--GPL--------------VQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPP
          ++DPFQR Y++H   K++   +++AA  F G HDF++F N AH       P+              ++LE EG GFLY+ VRN+VG L+ +       
Subjt:  GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV--GPL--------------VQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPP

Query:  DVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDH
        + + +I A+++R++ +  A   PP+GL L+ + Y+ ++
Subjt:  DVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDH

Arabidopsis top hitse value%identityAlignment
AT1G34150.1 Pseudouridine synthase family protein4.1e-1329.1Show/hide
Query:  PTIQCLIEEALIGATKL--ERKDLHLVGASRTDKGVHAWGQVAHFITPFNY-----DSLENVHA------------ALNGLLPVDIRVREISPAAPDFHA
        P+I+  + +AL     L  ++KD       RTDKGV + GQV              DS   V+              LN  LP DIRV   SPA  DFHA
Subjt:  PTIQCLIEEALIGATKL--ERKDLHLVGASRTDKGVHAWGQVAHFITPFNY-----DSLENVHA------------ALNGLLPVDIRVREISPAAPDFHA

Query:  RFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAF-------------------TNAAHNDRVG-PLVQLEVEGSGFLYR
        RFS  ++ Y Y  +                   LN +AM  A   F+G+HDF  F                    +   N   G  L    + GS FL+ 
Subjt:  RFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAF-------------------TNAAHNDRVG-PLVQLEVEGSGFLYR

Query:  QVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKY--ASGVP
        Q+R MV +L  IG+     DV+  +L ++      +Y  AS +P
Subjt:  QVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKY--ASGVP

AT3G06950.1 Pseudouridine synthase family protein9.8e-9265.34Show/hide
Query:  QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN
        Q SPPTIQ ++E+ALI  T+L RK+L L+GA RTD GVHAWGQVAHF+TPFNY SL++ HAALNGLLP DIRVRE+S A P+FHARFS  SKVY Y+IYN
Subjt:  QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN

Query:  GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHND---------------RVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPD
           +DPFQR + YHC YKLN + MREAAN FVGKHDFSAF NA   D               ++G L+QLEVEGSGFLYRQVRNMV LL+QIGKEA+  D
Subjt:  GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHND---------------RVGPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPD

Query:  VVPKILASRDRKELAKYAS-GVPPQGLCLVSINYKEDHLKLPSDCPGSSFG
        +VP IL ++DR+ LAKY S    P GLCLVS+ YKEDHLKLP DCP +S G
Subjt:  VVPKILASRDRKELAKYAS-GVPPQGLCLVSINYKEDHLKLPSDCPGSSFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTGCTGGGCGGTGGGTTCGCCTGTTCTTCCTCCCATTTCCCTTCCCCTTTCACCAAGCATTCCATTTCCAAATGGCGCTTCATCTTCCTCCAGTCGTGGATTCCC
GAGCCCCCTTTCCCCAGCTTCAAATGGCGGTTGCTCATCGCTTATGATGGTACCCGATACGCAGCGGTCACCACCCACTATTCAGTGCCTCATCGAAGAAGCCTTGATTG
GAGCAACAAAGCTTGAAAGGAAGGATCTCCATTTAGTTGGTGCAAGCAGAACAGATAAAGGAGTTCATGCCTGGGGTCAGGTGGCTCACTTTATTACGCCATTTAACTAC
GATAGCTTGGAAAACGTTCATGCTGCACTGAATGGTCTTCTTCCCGTGGATATAAGAGTTCGAGAGATCAGTCCTGCTGCGCCTGACTTTCATGCTCGGTTTTCTACGTT
AAGCAAGGTTTATCACTACAAGATATATAATGGCGCAATCTTGGATCCATTTCAGCGTTGCTACACTTACCATTGTGTTTATAAACTCAACTATGCAGCCATGAGAGAAG
CTGCAAATTATTTTGTTGGGAAGCATGATTTTTCTGCTTTTACAAATGCAGCACATAATGATCGAGTGGGACCTCTTGTGCAGCTAGAAGTTGAGGGGTCTGGGTTCTTG
TATAGACAAGTTCGGAATATGGTTGGCTTGTTGGTTCAAATTGGAAAGGAAGCAATTCCTCCTGATGTTGTTCCTAAGATTTTGGCTTCTCGAGATCGCAAGGAGCTTGC
CAAATATGCGTCAGGCGTTCCTCCTCAGGGGCTGTGCCTTGTGAGTATTAATTATAAAGAGGACCATTTAAAGCTTCCATCTGATTGCCCTGGGAGTAGTTTTGGGTGTT
CCAACAACTTAGGAGGCTGA
mRNA sequenceShow/hide mRNA sequence
TTTCAATCTTTGAATTGAAAACTTAGAAGACGGATGAGGTGCTGGGCGGTGGGTTCGCCTGTTCTTCCTCCCATTTCCCTTCCCCTTTCACCAAGCATTCCATTTCCAAA
TGGCGCTTCATCTTCCTCCAGTCGTGGATTCCCGAGCCCCCTTTCCCCAGCTTCAAATGGCGGTTGCTCATCGCTTATGATGGTACCCGATACGCAGCGGTCACCACCCA
CTATTCAGTGCCTCATCGAAGAAGCCTTGATTGGAGCAACAAAGCTTGAAAGGAAGGATCTCCATTTAGTTGGTGCAAGCAGAACAGATAAAGGAGTTCATGCCTGGGGT
CAGGTGGCTCACTTTATTACGCCATTTAACTACGATAGCTTGGAAAACGTTCATGCTGCACTGAATGGTCTTCTTCCCGTGGATATAAGAGTTCGAGAGATCAGTCCTGC
TGCGCCTGACTTTCATGCTCGGTTTTCTACGTTAAGCAAGGTTTATCACTACAAGATATATAATGGCGCAATCTTGGATCCATTTCAGCGTTGCTACACTTACCATTGTG
TTTATAAACTCAACTATGCAGCCATGAGAGAAGCTGCAAATTATTTTGTTGGGAAGCATGATTTTTCTGCTTTTACAAATGCAGCACATAATGATCGAGTGGGACCTCTT
GTGCAGCTAGAAGTTGAGGGGTCTGGGTTCTTGTATAGACAAGTTCGGAATATGGTTGGCTTGTTGGTTCAAATTGGAAAGGAAGCAATTCCTCCTGATGTTGTTCCTAA
GATTTTGGCTTCTCGAGATCGCAAGGAGCTTGCCAAATATGCGTCAGGCGTTCCTCCTCAGGGGCTGTGCCTTGTGAGTATTAATTATAAAGAGGACCATTTAAAGCTTC
CATCTGATTGCCCTGGGAGTAGTTTTGGGTGTTCCAACAACTTAGGAGGCTGA
Protein sequenceShow/hide protein sequence
MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSPLSPASNGGCSSLMMVPDTQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNY
DSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRVGPLVQLEVEGSGFL
YRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPSDCPGSSFGCSNNLGG